RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	YLR278C	Q05854	1341 aa		2.1	□□□□□ -2.07
DOT6	YER088C	UTP10	P42945	1769 aa	Known RBP	2.09	□□□□□ -2.07
DOT6	YER088C	MRS3	P10566	314 aa		2.09	□□□□□ -2.07
DOT6	YER088C	PMS1	P14242	873 aa		2.09	□□□□□ -2.07
DOT6	YER088C	SPE2	P21182	396 aa		2.09	□□□□□ -2.07
DOT6	YER088C	YKL100C	P34248	587 aa		2.09	□□□□□ -2.07
DOT6	YER088C	PHD1	P36093	366 aa		2.09	□□□□□ -2.07
DOT6	YER088C	AGP2	P38090	596 aa		2.09	□□□□□ -2.07
DOT6	YER088C	PFF1	P38244	976 aa		2.09	□□□□□ -2.07
DOT6	YER088C	DBP8	P38719	431 aa		2.09	□□□□□ -2.07
DOT6	YER088C	FLC2	P39719	783 aa		2.09	□□□□□ -2.07
DOT6	YER088C	YIR014W	P40570	242 aa		2.09	□□□□□ -2.07
DOT6	YER088C	SCS3	P53012	380 aa		2.09	□□□□□ -2.07
DOT6	YER088C	LCL3	P53153	274 aa		2.09	□□□□□ -2.07
DOT6	YER088C	CUL3	P53202	744 aa		2.09	□□□□□ -2.07
DOT6	YER088C	ARE2	P53629	642 aa	Known RBP	2.09	□□□□□ -2.07
DOT6	YER088C	RSM23	Q01163	450 aa		2.09	□□□□□ -2.07
DOT6	YER088C	DPB4	Q04603	196 aa	Known RBP	2.09	□□□□□ -2.07
DOT6	YER088C	NOP58	Q12499	511 aa	Known RBP	2.09	□□□□□ -2.07
DOT6	YER088C	YBR126W-A	Q8TGU7	68 aa		2.09	□□□□□ -2.07
DOT6	YER088C	YPT6	Q99260	215 aa		2.09	□□□□□ -2.07
DOT6	YER088C	FIG2	P25653	1609 aa		2.09	□□□□□ -2.07
DOT6	YER088C	ARG81	P05085	880 aa		2.08	□□□□□ -2.08
DOT6	YER088C	RPS24A	P0CX31	135 aa	Known RBP	2.08	□□□□□ -2.08
DOT6	YER088C	RPS24B	P0CX32	135 aa	Known RBP	2.08	□□□□□ -2.08
DOT6	YER088C	MET8	P15807	274 aa		2.08	□□□□□ -2.08
DOT6	YER088C	ELO2	P25358	347 aa		2.08	□□□□□ -2.08
DOT6	YER088C	YIH1	P25637	258 aa		2.08	□□□□□ -2.08
DOT6	YER088C	PPZ1	P26570	692 aa		2.08	□□□□□ -2.08
DOT6	YER088C	RPN2	P32565	945 aa	Known RBP	2.08	□□□□□ -2.08
DOT6	YER088C	SWE1	P32944	819 aa		2.08	□□□□□ -2.08
DOT6	YER088C	LOS1	P33418	1100 aa	Predicted RBP	2.08	□□□□□ -2.08
DOT6	YER088C	YBR144C	P34215	104 aa		2.08	□□□□□ -2.08
DOT6	YER088C	GCS1	P35197	352 aa		2.08	□□□□□ -2.08
DOT6	YER088C	SHC1	P39000	512 aa		2.08	□□□□□ -2.08
DOT6	YER088C	STB2	P46679	850 aa		2.08	□□□□□ -2.08
DOT6	YER088C	MRX6	P48564	524 aa		2.08	□□□□□ -2.08
DOT6	YER088C	YVH1	Q02256	364 aa	Known RBP	2.08	□□□□□ -2.08
DOT6	YER088C	YML037C	Q03703	340 aa		2.08	□□□□□ -2.08
DOT6	YER088C	YMR087W	Q04299	284 aa		2.08	□□□□□ -2.08
DOT6	YER088C	YLR352W	Q06479	807 aa		2.08	□□□□□ -2.08
DOT6	YER088C	GRS2	Q06817	618 aa		2.08	□□□□□ -2.08
DOT6	YER088C	YEH1	Q07804	573 aa		2.08	□□□□□ -2.08
DOT6	YER088C	NRT1	Q08485	598 aa		2.08	□□□□□ -2.08
DOT6	YER088C	RRI2	Q12348	645 aa		2.08	□□□□□ -2.08
DOT6	YER088C	GLN3	P18494	730 aa		2.08	□□□□□ -2.08
DOT6	YER088C	PRE8	P23639	250 aa		2.08	□□□□□ -2.08
DOT6	YER088C	CMK1	P27466	446 aa	Known RBP	2.08	□□□□□ -2.08
DOT6	YER088C	FAR3	P46671	204 aa		2.08	□□□□□ -2.08
DOT6	YER088C	DSD1	P53095	428 aa		2.08	□□□□□ -2.08
DOT6	YER088C	RHO4	Q00246	291 aa		2.08	□□□□□ -2.08
DOT6	YER088C	RPM2	Q02773	1202 aa		2.08	□□□□□ -2.08
DOT6	YER088C	DIC1	Q06143	298 aa		2.08	□□□□□ -2.08
DOT6	YER088C	THI20	Q08224	551 aa		2.08	□□□□□ -2.08
DOT6	YER088C	GSC2	P40989	1895 aa		2.08	□□□□□ -2.08
DOT6	YER088C	MF(ALPHA)1	P01149	165 aa		2.07	□□□□□ -2.08
DOT6	YER088C	MRP13	P12686	339 aa		2.07	□□□□□ -2.08
DOT6	YER088C	SGF29	P25554	259 aa		2.07	□□□□□ -2.08
DOT6	YER088C	IMG1	P25626	169 aa		2.07	□□□□□ -2.08
DOT6	YER088C	SNC1	P31109	117 aa		2.07	□□□□□ -2.08
DOT6	YER088C	ACH1	P32316	526 aa		2.07	□□□□□ -2.08
DOT6	YER088C	ERG1	P32476	496 aa	Known RBP	2.07	□□□□□ -2.08
DOT6	YER088C	YBL029W	P38201	376 aa		2.07	□□□□□ -2.08
DOT6	YER088C	BZZ1	P38822	633 aa		2.07	□□□□□ -2.08
DOT6	YER088C	YJL070C	P40361	888 aa		2.07	□□□□□ -2.08
DOT6	YER088C	YIL089W	P40500	205 aa		2.07	□□□□□ -2.08
DOT6	YER088C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.07	□□□□□ -2.08	not detected
DOT6	YER088C	MAF1	P41910	395 aa		2.07	□□□□□ -2.08
DOT6	YER088C	VPS75	P53853	264 aa		2.07	□□□□□ -2.08
DOT6	YER088C	YPL014W	Q02606	381 aa		2.07	□□□□□ -2.08
DOT6	YER088C	RBA50	Q04418	439 aa		2.07	□□□□□ -2.08
DOT6	YER088C	YMR317W	Q04893	1140 aa		2.07	□□□□□ -2.08
DOT6	YER088C	HCR1	Q05775	265 aa	Known RBP	2.07	□□□□□ -2.08
DOT6	YER088C	COQ9	Q05779	260 aa		2.07	□□□□□ -2.08
DOT6	YER088C	ECM30	Q06673	1274 aa		2.07	□□□□□ -2.08
DOT6	YER088C	SDH5	Q08230	162 aa		2.07	□□□□□ -2.08
DOT6	YER088C	YOR365C	Q08844	703 aa		2.07	□□□□□ -2.08
DOT6	YER088C	RDR1	Q08904	546 aa		2.07	□□□□□ -2.08
DOT6	YER088C	ARP6	Q12509	438 aa		2.07	□□□□□ -2.08
DOT6	YER088C	MLP1	Q02455	1875 aa	Known RBP	2.07	□□□□□ -2.08
DOT6	YER088C	AMD1	P15274	810 aa	Known RBP	2.07	□□□□□ -2.08
DOT6	YER088C	TYR1	P20049	452 aa		2.07	□□□□□ -2.08
DOT6	YER088C	BOS1	P25385	244 aa		2.07	□□□□□ -2.08
DOT6	YER088C	MCM4	P30665	933 aa	Known RBP	2.07	□□□□□ -2.08
DOT6	YER088C	NOP4	P37838	685 aa	Known RBP	2.07	□□□□□ -2.08
DOT6	YER088C	RIM2	P38127	377 aa		2.07	□□□□□ -2.08
DOT6	YER088C	LAG1	P38703	411 aa		2.07	□□□□□ -2.08
DOT6	YER088C	RTT107	P38850	1070 aa		2.07	□□□□□ -2.08
DOT6	YER088C	TMA108	P40462	946 aa		2.07	□□□□□ -2.08
DOT6	YER088C	AZF1	P41696	914 aa		2.07	□□□□□ -2.08
DOT6	YER088C	YJR154W	P47181	346 aa		2.07	□□□□□ -2.08
DOT6	YER088C	BUD32	P53323	261 aa		2.07	□□□□□ -2.08
DOT6	YER088C	ERO1	Q03103	563 aa		2.07	□□□□□ -2.08
DOT6	YER088C	FMP45	Q07651	309 aa		2.07	□□□□□ -2.08
DOT6	YER088C	CTI6	Q08923	506 aa		2.07	□□□□□ -2.08
DOT6	YER088C	FMP40	Q08968	688 aa	Predicted RBP	2.07	□□□□□ -2.08
DOT6	YER088C	TAH18	Q12181	623 aa		2.07	□□□□□ -2.08
DOT6	YER088C	PDH1	Q12428	516 aa	Known RBP	2.07	□□□□□ -2.08
DOT6	YER088C	CSR2	Q12734	1121 aa		2.07	□□□□□ -2.08
DOT6	YER088C	YMR230W-A	Q3E7B5	62 aa		2.07	□□□□□ -2.08

Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms