RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 GRIN2DO15399 1336 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 ZZEF1O43149 2961 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 SIPA1L1O43166 1804 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 KIF28PB7ZC32 967 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 MBTPS2O43462 519 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 ASNSP08243 561 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 CST5P28325 142 aaPredicted RBP8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 ERVK-21P61565 698 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 TRIM26Q12899 539 aaPredicted RBP8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 CCDC30Q5VVM6 783 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 TMEM105Q8N8V8 129 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 SLC43A3Q8NBI5 491 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 PHOSPHO2Q8TCD6 241 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 ZFP42Q96MM3 310 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 POP1Q99575 1024 aaKnown RBP8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 C17orf80Q9BSJ5 609 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 SPATC1LQ9H0A9 340 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 NRBP1Q9UHY1 535 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 ZBTB21Q9ULJ3 1066 aa8.6□□□□□ -1.03
SCAMP1-206ENST00000618166 PTPRSQ13332 1948 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 EP300Q09472 2414 aaPredicted RBP8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 GCN1Q92616 2671 aaKnown RBP8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 SPTBN2O15020 2390 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 FRYQ5TBA9 3013 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 LINC01553A4QN01 128 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 CTAGE5O15320 804 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 PDE8BO95263 885 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 ARP10275 920 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 CYP2C9P11712 490 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 FGFR2P21802 821 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 PTGS1P23219 599 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 BEX3Q00994 111 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 COL19A1Q14993 1142 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 XP32Q5T750 250 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 NCAPG2Q86XI2 1143 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 LINS1Q8NG48 757 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 C12orf42Q96LP6 360 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 TGS1Q96RS0 853 aaKnown RBP8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 PNNQ9H307 717 aaKnown RBP8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 RPAP3Q9H6T3 665 aaPredicted RBP8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 SLC5A4Q9NY91 659 aa8.59□□□□□ -1.03
SCAMP1-206ENST00000618166 FAM208BQ5VWN6 2430 aa8.59□□□□□ -1.04
SCAMP1-206ENST00000618166 SCN5AQ14524 2016 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 CEP250Q9BV73 2442 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 ZFYVE26Q68DK2 2539 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 ZNF853P0CG23 659 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 PSMC6P62333 389 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 DEFB103AP81534 67 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 PLS1Q14651 629 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 RSPO4Q2I0M5 234 aaPredicted RBP8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 GNASQ5JWF2 1037 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 CXCL17Q6UXB2 119 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 RPAINQ86UA6 219 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 CRACR2BQ8N4Y2 399 aaPredicted RBP8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 KLHDC4Q8TBB5 520 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 ACER1Q8TDN7 264 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 ZNF384Q8TF68 577 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 MRPL38Q96DV4 380 aaKnown RBP8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 CHAMP1Q96JM3 812 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 FEZ1Q99689 392 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 ZHX1Q9UKY1 873 aaPredicted RBP8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 WASF2Q9Y6W5 498 aa8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 ASH1LQ9NR48 2969 aaKnown RBP8.58□□□□□ -1.04
SCAMP1-206ENST00000618166 MYH2Q9UKX2 1941 aa8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 MAST4O15021 2626 aa8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 FLNBO75369 2602 aaKnown RBP8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 DUSP11O75319 330 aaKnown RBP8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 SNAI1O95863 264 aaPredicted RBP8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 PFKMP08237 780 aa8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 ITGA7Q13683 1181 aa8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 ZNF792Q3KQV3 632 aa8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 MCTP2Q6DN12 878 aa8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 PCSK9Q8NBP7 692 aaKnown RBP8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 BANK1Q8NDB2 785 aa8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 SHCBP1Q8NEM2 672 aa8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 DNAAF4Q8WXU2 420 aa8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 HERC5Q9UII4 1024 aaKnown RBP8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 FAM184BQ9ULE4 1060 aa8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 CNPY2Q9Y2B0 182 aa8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 MROH7-TTC4A0A0A0MT08 1334 aa8.57□□□□□ -1.04
SCAMP1-206ENST00000618166 MYH13Q9UKX3 1938 aa8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 CYSRT1A8MQ03 144 aa8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 LOC730098B7Z3J9 87 aa8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 GH2P01242 217 aa8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 IFIT1P09914 478 aaKnown RBP8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 FCER1AP12319 257 aa8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 ACTN1P12814 892 aa8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 GTF2F1P35269 517 aaKnown RBP eCLIP8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 GJA9P57773 515 aa8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 WDR5P61964 334 aaKnown RBP8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 COL9A3Q14050 684 aaPredicted RBP8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 PUM3Q15397 648 aaKnown RBP8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 FAM117BQ6P1L5 589 aa8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 DZIP1Q86YF9 867 aaKnown RBP8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 ABRAQ8N0Z2 381 aa8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 DCLK2Q8N568 766 aa8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 KAZALD1Q96I82 304 aa8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 FTOQ9C0B1 505 aaKnown RBP eCLIP8.56□□□□□ -1.04
SCAMP1-206ENST00000618166 UPF3AQ9H1J1 476 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms