RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PCGF6Q9BYE7 350 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 KRTAP4-7Q9BYR0 210 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 SAMD15Q9P1V8 674 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 APOBEC2Q9Y235 224 aaKnown RBP6.84□□□□□ -1.31
LINC00397-202ENST00000606785 PCDHA8Q9Y5H6 950 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 NPFFR2Q9Y5X5 522 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 BACE2Q9Y5Z0 518 aa6.84□□□□□ -1.31
LINC00397-202ENST00000606785 C2orf71A6NGG8 1288 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 RBAK-RBAKDNI3L0D1 243 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 NEMP1O14524 444 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 LEFTY1O75610 366 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 CBX7O95931 251 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 IREB2P48200 963 aaKnown RBP6.83□□□□□ -1.32
LINC00397-202ENST00000606785 GPR85P60893 370 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 TMPRSS15P98073 1019 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 ABHD17CQ6PCB6 329 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 PAOXQ6QHF9 649 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 CRTC3Q6UUV7 619 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 C22orf34Q6ZV56 151 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 WDR75Q8IWA0 830 aaKnown RBP6.83□□□□□ -1.32
LINC00397-202ENST00000606785 CCAR1Q8IX12 1150 aaKnown RBP6.83□□□□□ -1.32
LINC00397-202ENST00000606785 FAM20CQ8IXL6 584 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 CCDC146Q8IYE0 955 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 IFNL3Q8IZI9 196 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.83□□□□□ -1.32
LINC00397-202ENST00000606785 HDAC8Q9BY41 377 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 GPRC5CQ9NQ84 441 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 GPR27Q9NS67 375 aa6.83□□□□□ -1.32
LINC00397-202ENST00000606785 SHTN1A0MZ66 631 aa6.82□□□□□ -1.32
LINC00397-202ENST00000606785 SHISA3A0PJX4 238 aa6.82□□□□□ -1.32
LINC00397-202ENST00000606785 ARVCFO00192 962 aa6.82□□□□□ -1.32
LINC00397-202ENST00000606785 CBX4O00257 560 aa6.82□□□□□ -1.32
LINC00397-202ENST00000606785 MEFVO15553 781 aaPredicted RBP6.82□□□□□ -1.32
LINC00397-202ENST00000606785 FAM87AP0C7U9 286 aa6.82□□□□□ -1.32
LINC00397-202ENST00000606785 NOP2P46087 812 aaKnown RBP6.82□□□□□ -1.32
LINC00397-202ENST00000606785 NFKBIBQ15653 356 aa6.82□□□□□ -1.32
LINC00397-202ENST00000606785 E4F1Q66K89 784 aaPredicted RBP6.82□□□□□ -1.32
LINC00397-202ENST00000606785 FAM214BQ7L5A3 538 aa6.82□□□□□ -1.32
LINC00397-202ENST00000606785 DZIP1LQ8IYY4 767 aaKnown RBP6.82□□□□□ -1.32
LINC00397-202ENST00000606785 ARMC10Q8N2F6 343 aa6.82□□□□□ -1.32
LINC00397-202ENST00000606785 ZNF655Q8N720 491 aaPredicted RBP6.82□□□□□ -1.32
LINC00397-202ENST00000606785 DAGLBQ8NCG7 672 aa6.82□□□□□ -1.32
LINC00397-202ENST00000606785 PIWIL2Q8TC59 973 aaKnown RBP6.82□□□□□ -1.32
LINC00397-202ENST00000606785 SMAD5Q99717 465 aaKnown RBP6.82□□□□□ -1.32
LINC00397-202ENST00000606785 TRIM8Q9BZR9 551 aa6.82□□□□□ -1.32
LINC00397-202ENST00000606785 CCDC8Q9H0W5 538 aaPredicted RBP6.82□□□□□ -1.32
LINC00397-202ENST00000606785 KIF3BO15066 747 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 PAX4O43316 350 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 COBLO75128 1261 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 GLRX3O76003 335 aaKnown RBP6.81□□□□□ -1.32
LINC00397-202ENST00000606785 SCGB1D2O95969 90 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 F2P00734 622 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 ZNF865P0CJ78 1059 aaPredicted RBP6.81□□□□□ -1.32
LINC00397-202ENST00000606785 PYGMP11217 842 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 IFNGR1P15260 489 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 YBX3P16989 372 aaKnown RBP eCLIP6.81□□□□□ -1.32
LINC00397-202ENST00000606785 LTBRP36941 435 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 TXKP42681 527 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 ID4P47928 161 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 RAB27AP51159 221 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 MBTPS1Q14703 1052 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 SART3Q15020 963 aaKnown RBP6.81□□□□□ -1.32
LINC00397-202ENST00000606785 CLEC16AQ2KHT3 1053 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 SKOR2Q2VWA4 1001 aaPredicted RBP6.81□□□□□ -1.32
LINC00397-202ENST00000606785 LCE1DQ5T752 114 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 TXNRD3Q86VQ6 643 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 ZC3H7AQ8IWR0 971 aaKnown RBP6.81□□□□□ -1.32
LINC00397-202ENST00000606785 CNTD1Q8N815 330 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 FCRL3Q96P31 734 aaPredicted RBP6.81□□□□□ -1.32
LINC00397-202ENST00000606785 CRTAC1Q9NQ79 661 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 GTF2IRD1Q9UHL9 959 aa6.81□□□□□ -1.32
LINC00397-202ENST00000606785 ZNF891A8MT65 544 aaPredicted RBP6.8□□□□□ -1.32
LINC00397-202ENST00000606785 ARNTLO00327 626 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 IGF2BP3O00425 579 aaKnown RBP eCLIP6.8□□□□□ -1.32
LINC00397-202ENST00000606785 AKAP10O43572 662 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 BMP8BP34820 402 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 SEPHS1P49903 392 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 DSG1Q02413 1049 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 TNK2Q07912 1038 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 KCNAB2Q13303 367 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 LRRC41Q15345 812 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 SYDE2Q5VT97 1194 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 RCSD1Q6JBY9 416 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 LBX2Q6XYB7 198 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 CCDC103Q8IW40 242 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 NXPE1Q8N323 547 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 IGSF22Q8N9C0 903 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 COG1Q8WTW3 980 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 CHMP4CQ96CF2 233 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 SLC12A9Q9BXP2 914 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 GPR62Q9BZJ7 368 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 KCNF1Q9H3M0 494 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 ZIM2Q9NZV7 527 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 TMEFF2Q9UIK5 374 aaPredicted RBP6.8□□□□□ -1.32
LINC00397-202ENST00000606785 TRHDEQ9UKU6 1024 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 SPEF1Q9Y4P9 236 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 CAPN6Q9Y6Q1 641 aa6.8□□□□□ -1.32
LINC00397-202ENST00000606785 E2F8A0AVK6 867 aa6.79□□□□□ -1.32
LINC00397-202ENST00000606785 PRR33A8MZF0 331 aa6.79□□□□□ -1.32
LINC00397-202ENST00000606785 M0R2C6 588 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms