RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 TMEM106CQ9BVX2 250 aa13.78□□□□□ -0.2
TRIM25-205ENST00000572021 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.78□□□□□ -0.21e-7■■□□□ 12.5
TRIM25-205ENST00000572021 RBM28Q9NW13 759 aaKnown RBP13.78□□□□□ -0.2
TRIM25-205ENST00000572021 CFBP00751 764 aa13.77□□□□□ -0.21
TRIM25-205ENST00000572021 CNGA1P29973 690 aa13.77□□□□□ -0.21
TRIM25-205ENST00000572021 ANO1Q5XXA6 986 aa13.77□□□□□ -0.21
TRIM25-205ENST00000572021 GPKOWQ92917 476 aaPredicted RBP eCLIP13.77□□□□□ -0.21
TRIM25-205ENST00000572021 DEFB118Q96PH6 123 aa13.77□□□□□ -0.21
TRIM25-205ENST00000572021 HMX1Q9NP08 348 aaPredicted RBP13.77□□□□□ -0.21
TRIM25-205ENST00000572021 COL20A1Q9P218 1284 aa13.77□□□□□ -0.21
TRIM25-205ENST00000572021 SEC63Q9UGP8 760 aaKnown RBP13.77□□□□□ -0.21
TRIM25-205ENST00000572021 PNMA2Q9UL42 364 aa13.77□□□□□ -0.21
TRIM25-205ENST00000572021 TPCN1Q9ULQ1 816 aa13.77□□□□□ -0.21
TRIM25-205ENST00000572021 DIS3Q9Y2L1 958 aaKnown RBP13.77□□□□□ -0.21
TRIM25-205ENST00000572021 MRPL11Q9Y3B7 192 aaKnown RBP13.77□□□□□ -0.21
TRIM25-205ENST00000572021 V9GY48 417 aaPredicted RBP13.77□□□□□ -0.21
TRIM25-205ENST00000572021 KIAA0100Q14667 2235 aaKnown RBP13.77□□□□□ -0.21
TRIM25-205ENST00000572021 RPTORQ8N122 1335 aa13.76□□□□□ -0.21
TRIM25-205ENST00000572021 MKI67P46013 3256 aaKnown RBP13.76□□□□□ -0.21
TRIM25-205ENST00000572021 SNAI1O95863 264 aaPredicted RBP13.76□□□□□ -0.21
TRIM25-205ENST00000572021 CYBAP13498 195 aa13.76□□□□□ -0.21
TRIM25-205ENST00000572021 SMARCA1P28370 1054 aa13.76□□□□□ -0.21
TRIM25-205ENST00000572021 HOXA13P31271 388 aaPredicted RBP13.76□□□□□ -0.21
TRIM25-205ENST00000572021 EVCP57679 992 aa13.76□□□□□ -0.21
TRIM25-205ENST00000572021 HEATR3Q7Z4Q2 680 aa13.76□□□□□ -0.21
TRIM25-205ENST00000572021 PHKBQ93100 1093 aa13.76□□□□□ -0.21
TRIM25-205ENST00000572021 SNX21Q969T3 373 aa13.76□□□□□ -0.21
TRIM25-205ENST00000572021 LARGE1O95461 756 aa13.75□□□□□ -0.21
TRIM25-205ENST00000572021 RCAN1P53805 252 aa13.75□□□□□ -0.21
TRIM25-205ENST00000572021 ARMCX2Q7L311 632 aa13.75□□□□□ -0.21
TRIM25-205ENST00000572021 PAK6Q9NQU5 681 aaPredicted RBP13.75□□□□□ -0.21
TRIM25-205ENST00000572021 NID2Q14112 1375 aa13.75□□□□□ -0.21
TRIM25-205ENST00000572021 IFFO2Q5TF58 517 aa13.75□□□□□ -0.21
TRIM25-205ENST00000572021 EEPD1Q7L9B9 569 aa13.75□□□□□ -0.21
TRIM25-205ENST00000572021 ZNF467Q7Z7K2 595 aaPredicted RBP13.75□□□□□ -0.21
TRIM25-205ENST00000572021 NECAB1Q8N987 351 aa13.75□□□□□ -0.21
TRIM25-205ENST00000572021 SYTL5Q8TDW5 730 aaPredicted RBP13.75□□□□□ -0.21
TRIM25-205ENST00000572021 LENG1Q96BZ8 264 aaPredicted RBP13.75□□□□□ -0.21
TRIM25-205ENST00000572021 SHISA4Q96DD7 197 aa13.75□□□□□ -0.21
TRIM25-205ENST00000572021 ZNF274Q96GC6 653 aaPredicted RBP13.75□□□□□ -0.21
TRIM25-205ENST00000572021 TAAR1Q96RJ0 339 aa13.75□□□□□ -0.21
TRIM25-205ENST00000572021 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.75□□□□□ -0.21
TRIM25-205ENST00000572021 LRRC37A2A6NM11 1700 aa13.74□□□□□ -0.21
TRIM25-205ENST00000572021 CCDC196A0A1B0GTZ2 297 aa13.74□□□□□ -0.21
TRIM25-205ENST00000572021 GJB1P08034 283 aa13.74□□□□□ -0.21
TRIM25-205ENST00000572021 ALDH5A1P51649 535 aaPredicted RBP13.74□□□□□ -0.21
TRIM25-205ENST00000572021 NTRK3Q16288 839 aa13.74□□□□□ -0.21
TRIM25-205ENST00000572021 WWC2Q6AWC2 1192 aa13.74□□□□□ -0.21
TRIM25-205ENST00000572021 MAMDC4Q6UXC1 1216 aa13.74□□□□□ -0.21
TRIM25-205ENST00000572021 FCHSD1Q86WN1 690 aa13.74□□□□□ -0.21
TRIM25-205ENST00000572021 MCF2L2Q86YR7 1114 aa13.74□□□□□ -0.21
TRIM25-205ENST00000572021 RGS22Q8NE09 1264 aa13.74□□□□□ -0.21
TRIM25-205ENST00000572021 U2AF1L4Q8WU68 220 aaKnown RBP13.74□□□□□ -0.21
TRIM25-205ENST00000572021 SLC26A6Q9BXS9 759 aa13.74□□□□□ -0.21
TRIM25-205ENST00000572021 ALDH8A1Q9H2A2 487 aaPredicted RBP13.74□□□□□ -0.21
TRIM25-205ENST00000572021 ZHX1Q9UKY1 873 aaPredicted RBP13.74□□□□□ -0.21
TRIM25-205ENST00000572021 CNPY2Q9Y2B0 182 aa13.74□□□□□ -0.21
TRIM25-205ENST00000572021 FRMPD3Q5JV73 1810 aa13.74□□□□□ -0.21
TRIM25-205ENST00000572021 SYNGAP1Q96PV0 1343 aa13.73□□□□□ -0.21
TRIM25-205ENST00000572021 TFRCP02786 760 aaKnown RBP13.73□□□□□ -0.21
TRIM25-205ENST00000572021 ZNF865P0CJ78 1059 aaPredicted RBP13.73□□□□□ -0.21
TRIM25-205ENST00000572021 PTGS1P23219 599 aa13.73□□□□□ -0.21
TRIM25-205ENST00000572021 HSD17B4P51659 736 aa13.73□□□□□ -0.21
TRIM25-205ENST00000572021 SCRN1Q12765 414 aa13.73□□□□□ -0.21
TRIM25-205ENST00000572021 TYW1BQ6NUM6 668 aa13.73□□□□□ -0.21
TRIM25-205ENST00000572021 FBXO16Q8IX29 292 aaPredicted RBP13.73□□□□□ -0.21
TRIM25-205ENST00000572021 SLKQ9H2G2 1235 aaPredicted RBP13.73□□□□□ -0.21
TRIM25-205ENST00000572021 ASB14A6NK59 587 aa13.72□□□□□ -0.21
TRIM25-205ENST00000572021 GCOM1H8Y6P7 765 aaPredicted RBP13.72□□□□□ -0.21
TRIM25-205ENST00000572021 SGPL1O95470 568 aa13.72□□□□□ -0.21
TRIM25-205ENST00000572021 POLR2MP0CAP2 368 aa13.72□□□□□ -0.21
TRIM25-205ENST00000572021 EIF2AK2P19525 551 aaKnown RBP13.72□□□□□ -0.21
TRIM25-205ENST00000572021 GJA8P48165 433 aa13.72□□□□□ -0.21
TRIM25-205ENST00000572021 ACVR2BQ13705 512 aa13.72□□□□□ -0.21
TRIM25-205ENST00000572021 PPP2R5BQ15173 497 aa13.72□□□□□ -0.21
TRIM25-205ENST00000572021 ANKRD1Q15327 319 aa13.72□□□□□ -0.21
TRIM25-205ENST00000572021 UBE2SQ16763 222 aa13.72□□□□□ -0.21
TRIM25-205ENST00000572021 ME3Q16798 604 aa13.72□□□□□ -0.21
TRIM25-205ENST00000572021 LHX8Q68G74 356 aa13.72□□□□□ -0.21
TRIM25-205ENST00000572021 USP17L6PQ6QN14 398 aa13.72□□□□□ -0.21
TRIM25-205ENST00000572021 HSCBQ8IWL3 235 aa13.72□□□□□ -0.21
TRIM25-205ENST00000572021 RMDN3Q96TC7 470 aa13.72□□□□□ -0.21
TRIM25-205ENST00000572021 ADD3Q9UEY8 706 aaKnown RBP13.72□□□□□ -0.21
TRIM25-205ENST00000572021 DDX20Q9UHI6 824 aaKnown RBP13.72□□□□□ -0.21
TRIM25-205ENST00000572021 STXBP3O00186 592 aa13.71□□□□□ -0.21
TRIM25-205ENST00000572021 CPLX1O14810 134 aa13.71□□□□□ -0.21
TRIM25-205ENST00000572021 SEPT4O43236 478 aa13.71□□□□□ -0.21
TRIM25-205ENST00000572021 ADCY6O43306 1168 aa13.71□□□□□ -0.21
TRIM25-205ENST00000572021 PFKFB2O60825 505 aa13.71□□□□□ -0.21
TRIM25-205ENST00000572021 MYCNP04198 464 aaPredicted RBP13.71□□□□□ -0.21
TRIM25-205ENST00000572021 IFNAR1P17181 557 aa13.71□□□□□ -0.21
TRIM25-205ENST00000572021 NAPAP54920 295 aa13.71□□□□□ -0.21
TRIM25-205ENST00000572021 TRAF1Q13077 416 aa13.71□□□□□ -0.21
TRIM25-205ENST00000572021 PKN1Q16512 942 aa13.71□□□□□ -0.21
TRIM25-205ENST00000572021 TMEM63BQ5T3F8 832 aa13.71□□□□□ -0.21
TRIM25-205ENST00000572021 MSL3Q8N5Y2 521 aaKnown RBP13.71□□□□□ -0.21
TRIM25-205ENST00000572021 ZFP91Q96JP5 570 aaPredicted RBP13.71□□□□□ -0.21
TRIM25-205ENST00000572021 KATNBL1Q9H079 304 aa13.71□□□□□ -0.21
TRIM25-205ENST00000572021 PDGFCQ9NRA1 345 aa13.71□□□□□ -0.21
TRIM25-205ENST00000572021 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms