RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 TCRBV16S1A1N1A0A5B0 115 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 FITM1A5D6W6 292 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 MAFO75444 373 aaPredicted RBP2.5□□□□□ -2.01
HIF1A-212ENST00000557538 KCNH1O95259 989 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 SYPP08247 313 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 SNRPB2P08579 225 aaKnown RBP2.5□□□□□ -2.01
HIF1A-212ENST00000557538 IGFALSP35858 605 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 CLEC16AQ2KHT3 1053 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 C16orf59Q7L2K0 433 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 ADAT2Q7Z6V5 191 aaKnown RBP2.5□□□□□ -2.01
HIF1A-212ENST00000557538 NIM1KQ8IY84 436 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 AFAP1L2Q8N4X5 818 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 AGBL5Q8NDL9 886 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 TTLL11Q8NHH1 800 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 SLC7A14Q8TBB6 771 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 PCGF6Q9BYE7 350 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 LGR6Q9HBX8 967 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.5□□□□□ -2.014e-7■■■□□ 16.1
HIF1A-212ENST00000557538 PFDN2Q9UHV9 154 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 TCFL5Q9UL49 500 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 RBAK-RBAKDNI3L0D1 243 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 HMGB1P09429 215 aaKnown RBP2.49□□□□□ -2.01
HIF1A-212ENST00000557538 ZGLP1P0C6A0 271 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 PNLIPP16233 465 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 HOXA10P31260 410 aaPredicted RBP2.49□□□□□ -2.01
HIF1A-212ENST00000557538 KRT85P78386 507 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 PTPROQ16827 1216 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 KIZQ2M2Z5 673 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 ANGEL2Q5VTE6 544 aaKnown RBP2.49□□□□□ -2.01
HIF1A-212ENST00000557538 GALNT18Q6P9A2 607 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 NLRX1Q86UT6 975 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 KSR1Q8IVT5 923 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 MTFR1LQ9H019 292 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 CCDC39Q9UFE4 941 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 PCDHA11Q9Y5I1 949 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 FAPQ12884 760 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 LSAMPQ13449 338 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 ARHGAP44Q17R89 818 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 ZNF662Q6ZS27 426 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 NECAB2Q7Z6G3 386 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 CCDC103Q8IW40 242 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 ANKRD13AQ8IZ07 590 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 NETO2Q8NC67 525 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 DIO2Q92813 273 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 SHISA4Q96DD7 197 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 SCLYQ96I15 445 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 CDC6Q99741 560 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 CELF4Q9BZC1 486 aaKnown RBP2.49□□□□□ -2.01
HIF1A-212ENST00000557538 PAK6Q9NQU5 681 aaPredicted RBP2.49□□□□□ -2.01
HIF1A-212ENST00000557538 LRP2BPQ9P2M1 347 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 SFMBT1Q9UHJ3 866 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 SLC5A6Q9Y289 635 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 TIMM13Q9Y5L4 95 aaPredicted RBP2.49□□□□□ -2.01
HIF1A-212ENST00000557538 ANKRD62A6NC57 917 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 TADA3O75528 432 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 MED26O95402 600 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 TGFB1P01137 390 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 YBX3P16989 372 aaKnown RBP eCLIP2.49□□□□□ -2.01
HIF1A-212ENST00000557538 ERVFRD-1P60508 538 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 SCRN1Q12765 414 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 YOD1Q5VVQ6 348 aaPredicted RBP2.49□□□□□ -2.01
HIF1A-212ENST00000557538 BRF1Q92994 677 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 SEMA6BQ9H3T3 888 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 SLC52A2Q9HAB3 445 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 PCDH12Q9NPG4 1184 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 IFT57Q9NWB7 429 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 PHLDB1Q86UU1 1377 aa2.49□□□□□ -2.01
HIF1A-212ENST00000557538 NPHS1O60500 1241 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 VAMP4O75379 141 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 SOX5P35711 763 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 FLT3P36888 993 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 LRP8Q14114 963 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 CRTC3Q6UUV7 619 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 ARHGAP27Q6ZUM4 889 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 OVCH1Q7RTY7 1134 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 PLEKHO2Q8TD55 490 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 DLG3Q92796 817 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 HHIPL1Q96JK4 782 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 ATP13A1Q9HD20 1204 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 C19orf73Q9NVV2 129 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 B4GALT6Q9UBX8 382 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 CTNND2Q9UQB3 1225 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 CD2APQ9Y5K6 639 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 H3BS24 57 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 ZEB2O60315 1214 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 PLS3P13797 630 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 SDSP20132 328 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 L1CAMP32004 1257 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 AMPD3Q01432 767 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 SF1Q15637 639 aaKnown RBP2.48□□□□□ -2.01
HIF1A-212ENST00000557538 AOC3Q16853 763 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 HSF5Q4G112 596 aaPredicted RBP2.48□□□□□ -2.01
HIF1A-212ENST00000557538 SPRED2Q7Z698 418 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 FBXL6Q8N531 539 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 RCBTB1Q8NDN9 531 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 DPF3Q92784 378 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 CAMKK2Q96RR4 588 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 ZSWIM5Q9P217 1185 aa2.48□□□□□ -2.01
HIF1A-212ENST00000557538 TMEFF2Q9UIK5 374 aaPredicted RBP2.48□□□□□ -2.01
HIF1A-212ENST00000557538 GPR55Q9Y2T6 319 aaPredicted RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms