RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 CAP1Q01518 475 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 BAATQ14032 418 aaPredicted RBP6.74□□□□□ -1.33
ABCF1-207ENST00000542772 GRB14Q14449 540 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 ZNF792Q3KQV3 632 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 USP17L6PQ6QN14 398 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 SAMD1Q6SPF0 538 aaPredicted RBP6.74□□□□□ -1.33
ABCF1-207ENST00000542772 RNF207Q6ZRF8 634 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 HEATR3Q7Z4Q2 680 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 GPR142Q7Z601 462 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 PLEKHH3Q7Z736 793 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 ZNF467Q7Z7K2 595 aaPredicted RBP6.74□□□□□ -1.33
ABCF1-207ENST00000542772 NCAPG2Q86XI2 1143 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 BLIDQ8IZY5 108 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 FAM133AQ8N9E0 248 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 DNERQ8NFT8 737 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 BICD2Q8TD16 824 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 SYTL5Q8TDW5 730 aaPredicted RBP6.74□□□□□ -1.33
ABCF1-207ENST00000542772 MORC4Q8TE76 937 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 CUL5Q93034 780 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 TNFRSF25Q93038 417 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 C8orf76Q96K31 380 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 BEGAINQ9BUH8 593 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 FOXP1Q9H334 677 aaPredicted RBP6.74□□□□□ -1.33
ABCF1-207ENST00000542772 A1CFQ9NQ94 594 aaKnown RBP6.74□□□□□ -1.33
ABCF1-207ENST00000542772 CYP39A1Q9NYL5 469 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 PCDHA6Q9UN73 950 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 KCNJ14Q9UNX9 436 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 PCDHA8Q9Y5H6 950 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 MGAMO43451 1857 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 PFASO15067 1338 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 PLXNB2O15031 1838 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 SOWAHBA6NEL2 793 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 BTBD18B2RXH4 712 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 STX6O43752 255 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 FKTNO75072 461 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 COBLO75128 1261 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 CFBP00751 764 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 CYP3A4P08684 503 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 XRCC5P13010 732 aaKnown RBP6.73□□□□□ -1.33
ABCF1-207ENST00000542772 TAL1P17542 331 aaPredicted RBP6.73□□□□□ -1.33
ABCF1-207ENST00000542772 PSMC4P43686 418 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 USP11P51784 963 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 PRMT2P55345 433 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 AP3B2Q13367 1082 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 IRF5Q13568 498 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 TRIM29Q14134 588 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 KCTD2Q14681 263 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 ARHGEF6Q15052 776 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 MAMDC4Q6UXC1 1216 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 VSIG10LQ86VR7 867 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 ANKRD35Q8N283 1001 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 ZNF296Q8WUU4 475 aaPredicted RBP6.73□□□□□ -1.33
ABCF1-207ENST00000542772 TRIM47Q96LD4 638 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 FGD4Q96M96 766 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 TAAR1Q96RJ0 339 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 IWS1Q96ST2 819 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 FOXD4L1Q9NU39 408 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 COL20A1Q9P218 1284 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 BIN2Q9UBW5 565 aaPredicted RBP6.73□□□□□ -1.33
ABCF1-207ENST00000542772 MTMR6Q9Y217 621 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 ZDHHC9Q9Y397 364 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 FRMPD4Q14CM0 1322 aa6.73□□□□□ -1.33
ABCF1-207ENST00000542772 ZNF236Q9UL36 1845 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 CYP3A7-CYP3A51PA0A087WV96 503 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 BRD1O95696 1058 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 HSP90AA1P07900 732 aaKnown RBP6.72□□□□□ -1.33
ABCF1-207ENST00000542772 CYP3A7P24462 503 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 EDNRBP24530 442 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 HOXD10P28358 340 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 ADORA2AP29274 412 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 CIITAP33076 1130 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 KRT2P35908 639 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 ADCY7P51828 1080 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 FCGRTP55899 365 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 NUCB2P80303 420 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 MAP2K5Q13163 448 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 KIF22Q14807 665 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 SAFBQ15424 915 aaKnown RBP eCLIP6.72□□□□□ -1.33
ABCF1-207ENST00000542772 EARS2Q5JPH6 523 aaKnown RBP6.72□□□□□ -1.33
ABCF1-207ENST00000542772 XRRA1Q6P2D8 792 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 DIS3L2Q8IYB7 885 aaKnown RBP6.72□□□□□ -1.33
ABCF1-207ENST00000542772 REXO1Q8N1G1 1221 aaKnown RBP6.72□□□□□ -1.33
ABCF1-207ENST00000542772 MSL3Q8N5Y2 521 aaKnown RBP6.72□□□□□ -1.33
ABCF1-207ENST00000542772 SPRYD3Q8NCJ5 442 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 NPLOC4Q8TAT6 608 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 OXER1Q8TDS5 423 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 NSUN6Q8TEA1 469 aaKnown RBP6.72□□□□□ -1.33
ABCF1-207ENST00000542772 ERO1AQ96HE7 468 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 MBOAT7Q96N66 472 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 MMP19Q99542 508 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 NUDT12Q9BQG2 462 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 ZSCAN16Q9H4T2 348 aaPredicted RBP6.72□□□□□ -1.33
ABCF1-207ENST00000542772 HOMER2Q9NSB8 354 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 TMEM260Q9NX78 707 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 ADD3Q9UEY8 706 aaKnown RBP6.72□□□□□ -1.33
ABCF1-207ENST00000542772 CIZ1Q9ULV3 898 aaPredicted RBP6.72□□□□□ -1.33
ABCF1-207ENST00000542772 IVNS1ABPQ9Y6Y0 642 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 ASTN1O14525 1302 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 RPTORQ8N122 1335 aa6.72□□□□□ -1.33
ABCF1-207ENST00000542772 KIF28PB7ZC32 967 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms