RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 POM121Q96HA1 1249 aa13.64□□□□□ -0.23
CYB561A3-214ENST00000540139 AGBL1Q96MI9 1066 aa13.64□□□□□ -0.23
CYB561A3-214ENST00000540139 SLC26A6Q9BXS9 759 aa13.64□□□□□ -0.23
CYB561A3-214ENST00000540139 BARHL2Q9NY43 387 aa13.64□□□□□ -0.23
CYB561A3-214ENST00000540139 PCDHA1Q9Y5I3 950 aa13.64□□□□□ -0.23
CYB561A3-214ENST00000540139 PPP1R11O60927 126 aaPredicted RBP13.63□□□□□ -0.23
CYB561A3-214ENST00000540139 HOXD10P28358 340 aa13.63□□□□□ -0.23
CYB561A3-214ENST00000540139 CTCFP49711 727 aaPredicted RBP13.63□□□□□ -0.23
CYB561A3-214ENST00000540139 FCGRTP55899 365 aa13.63□□□□□ -0.23
CYB561A3-214ENST00000540139 GALNT17Q6IS24 598 aa13.63□□□□□ -0.23
CYB561A3-214ENST00000540139 HOMER1Q86YM7 354 aa13.63□□□□□ -0.23
CYB561A3-214ENST00000540139 CCDC83Q8IWF9 413 aa13.63□□□□□ -0.23
CYB561A3-214ENST00000540139 CLEC4DQ8WXI8 215 aa13.63□□□□□ -0.23
CYB561A3-214ENST00000540139 PHKBQ93100 1093 aa13.63□□□□□ -0.23
CYB561A3-214ENST00000540139 TRERF1Q96PN7 1200 aa13.63□□□□□ -0.23
CYB561A3-214ENST00000540139 ACAD9Q9H845 621 aa13.63□□□□□ -0.23
CYB561A3-214ENST00000540139 ORC3Q9UBD5 711 aaPredicted RBP13.63□□□□□ -0.23
CYB561A3-214ENST00000540139 KIF3AQ9Y496 699 aa13.63□□□□□ -0.23
CYB561A3-214ENST00000540139 RIPK3Q9Y572 518 aa13.63□□□□□ -0.23
CYB561A3-214ENST00000540139 ESYT2A0FGR8 921 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 SLC15A5A6NIM6 579 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 FCER1AP12319 257 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 ALAS1P13196 640 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 FDPSP14324 419 aaKnown RBP13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 XBP1P17861 261 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 FECHP22830 423 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 PRMT2P55345 433 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 SNAP25P60880 206 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 CACNB1Q02641 598 aaPredicted RBP13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 BECN1Q14457 450 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 PLEKHH3Q7Z736 793 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 NCAPG2Q86XI2 1143 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 ZNF296Q8WUU4 475 aaPredicted RBP13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 GZF1Q9H116 711 aaPredicted RBP13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 PORCNQ9H237 461 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 RNF146Q9NTX7 359 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 IVNS1ABPQ9Y6Y0 642 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 PFASO15067 1338 aa13.62□□□□□ -0.23
CYB561A3-214ENST00000540139 LOC102724159A0A0B4J2E5 919 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 PTPDC1A2A3K4 754 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 PIK3CDO00329 1044 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 HSPA1AP0DMV8 641 aaKnown RBP13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 HSPA1BP0DMV9 641 aaKnown RBP13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 HSPA8P11142 646 aaKnown RBP13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 PTPREP23469 700 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 PSMC4P43686 418 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 GRB14Q14449 540 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 PWP2Q15269 919 aaKnown RBP13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 WWC2Q6AWC2 1192 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 MCTP2Q6DN12 878 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 GPR142Q7Z601 462 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 CCDC148Q8NFR7 591 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 SOCS4Q8WXH5 440 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 COA7Q96BR5 231 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 ZMYND12Q9H0C1 365 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 EFCC1Q9HA90 598 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 PLSCR2Q9NRY7 297 aa13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 DIS3Q9Y2L1 958 aaKnown RBP13.61□□□□□ -0.23
CYB561A3-214ENST00000540139 GRXCR2A6NFK2 248 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 SMCHD1A6NHR9 2005 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 STXBP3O00186 592 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 TNPO2O14787 897 aaKnown RBP13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 FOXN1O15353 648 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 PEX10O60683 326 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 HOXC6P09630 235 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 XRCC5P13010 732 aaKnown RBP13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 GNA11P29992 359 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 MRPL12P52815 198 aaKnown RBP13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 KCTD2Q14681 263 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 USH1GQ495M9 461 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 MORN1Q5T089 497 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 HEATR3Q7Z4Q2 680 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 OXER1Q8TDS5 423 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 USP6NLQ92738 828 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 NUDT12Q9BQG2 462 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 PSTPIP2Q9H939 334 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 SLC5A4Q9NY91 659 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 GJD2Q9UKL4 321 aa13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 COL11A1P12107 1806 aaPredicted RBP13.6□□□□□ -0.23
CYB561A3-214ENST00000540139 DOCK3Q8IZD9 2030 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 DNAJC25-GNG10A0A024R161 153 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 hCG_1642624A0A1W2PR95 340 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 GCOM1H8Y6P7 765 aaPredicted RBP13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 JAK2O60674 1132 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 POLR2MP0CAP2 368 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 CALML3P27482 149 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 HSD17B4P51659 736 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 IRF5Q13568 498 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 MUM1L1Q5H9M0 696 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 RNF207Q6ZRF8 634 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 BICD2Q8TD16 824 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 PIBF1Q8WXW3 757 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 TRIM47Q96LD4 638 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 MMP19Q99542 508 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 ALG1Q9BT22 464 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 CWC22Q9HCG8 908 aaKnown RBP13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 C6orf50Q9HD87 102 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 RIC8AQ9NPQ8 531 aa13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 A1CFQ9NQ94 594 aaKnown RBP13.59□□□□□ -0.23
CYB561A3-214ENST00000540139 PRDM10Q9NQV6 1147 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms