RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 TTC22Q5TAA0 569 aa16.42■□□□□ 0.22
CCND1-204ENST00000539241 TMEM199Q8N511 208 aa16.42■□□□□ 0.22
CCND1-204ENST00000539241 SLC43A3Q8NBI5 491 aa16.42■□□□□ 0.22
CCND1-204ENST00000539241 CLEC4DQ8WXI8 215 aa16.42■□□□□ 0.22
CCND1-204ENST00000539241 MYLIPQ8WY64 445 aa16.42■□□□□ 0.22
CCND1-204ENST00000539241 ESR2Q92731 530 aa16.42■□□□□ 0.22
CCND1-204ENST00000539241 NEDD4P46934 1319 aa16.42■□□□□ 0.22
CCND1-204ENST00000539241 LOC102724159A0A0B4J2E5 919 aa16.41■□□□□ 0.22
CCND1-204ENST00000539241 ZNF213O14771 459 aa16.41■□□□□ 0.22
CCND1-204ENST00000539241 CSF2RAP15509 400 aa16.41■□□□□ 0.22
CCND1-204ENST00000539241 ITGA7Q13683 1181 aa16.41■□□□□ 0.22
CCND1-204ENST00000539241 PWP2Q15269 919 aaKnown RBP16.41■□□□□ 0.22
CCND1-204ENST00000539241 TMEM240Q5SV17 173 aa16.41■□□□□ 0.22
CCND1-204ENST00000539241 SLC30A10Q6XR72 485 aa16.41■□□□□ 0.22
CCND1-204ENST00000539241 SKAP1Q86WV1 359 aa16.41■□□□□ 0.22
CCND1-204ENST00000539241 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.41■□□□□ 0.22
CCND1-204ENST00000539241 DIAPH3Q9NSV4 1193 aa16.41■□□□□ 0.22
CCND1-204ENST00000539241 GTF3C3Q9Y5Q9 886 aa16.41■□□□□ 0.22
CCND1-204ENST00000539241 WDR19Q8NEZ3 1342 aa16.41■□□□□ 0.22
CCND1-204ENST00000539241 EYSQ5T1H1 3165 aa16.4■□□□□ 0.22
CCND1-204ENST00000539241 CDH23Q9H251 3354 aa16.4■□□□□ 0.22
CCND1-204ENST00000539241 DNAJB2P25686 324 aa16.4■□□□□ 0.22
CCND1-204ENST00000539241 CALML3P27482 149 aa16.4■□□□□ 0.22
CCND1-204ENST00000539241 DUSP28Q4G0W2 176 aa16.4■□□□□ 0.22
CCND1-204ENST00000539241 GPATCH4Q5T3I0 446 aaKnown RBP16.4■□□□□ 0.22
CCND1-204ENST00000539241 CWC27Q6UX04 472 aaKnown RBP16.4■□□□□ 0.22
CCND1-204ENST00000539241 RNF207Q6ZRF8 634 aa16.4■□□□□ 0.22
CCND1-204ENST00000539241 C16orf59Q7L2K0 433 aa16.4■□□□□ 0.22
CCND1-204ENST00000539241 DGKHQ86XP1 1220 aa16.4■□□□□ 0.22
CCND1-204ENST00000539241 MAFAQ8NHW3 353 aaPredicted RBP16.4■□□□□ 0.22
CCND1-204ENST00000539241 ZKSCAN3Q9BRR0 538 aa16.4■□□□□ 0.22
CCND1-204ENST00000539241 SEZ6LQ9BYH1 1024 aa16.4■□□□□ 0.22
CCND1-204ENST00000539241 WDR11Q9BZH6 1224 aa16.4■□□□□ 0.22
CCND1-204ENST00000539241 GRIN2DO15399 1336 aa16.4■□□□□ 0.22
CCND1-204ENST00000539241 GOLGA8HP0CJ92 632 aa16.39■□□□□ 0.21
CCND1-204ENST00000539241 ACRP10323 421 aa16.39■□□□□ 0.21
CCND1-204ENST00000539241 GSPT1P15170 499 aaKnown RBP16.39■□□□□ 0.21
CCND1-204ENST00000539241 CYP2C18P33260 490 aa16.39■□□□□ 0.21
CCND1-204ENST00000539241 NT5C2P49902 561 aa16.39■□□□□ 0.21
CCND1-204ENST00000539241 RPS6P62753 249 aaKnown RBP16.39■□□□□ 0.21
CCND1-204ENST00000539241 PSRC1Q6PGN9 363 aaPredicted RBP16.39■□□□□ 0.21
CCND1-204ENST00000539241 IQCA1Q86XH1 822 aa16.39■□□□□ 0.21
CCND1-204ENST00000539241 HIPK3Q9H422 1215 aa16.39■□□□□ 0.21
CCND1-204ENST00000539241 RBM47A0AV96 593 aaKnown RBP16.38■□□□□ 0.21
CCND1-204ENST00000539241 HIP1O00291 1037 aa16.38■□□□□ 0.21
CCND1-204ENST00000539241 KDM4AO75164 1064 aa16.38■□□□□ 0.21
CCND1-204ENST00000539241 FOSL2P15408 326 aa16.38■□□□□ 0.21
CCND1-204ENST00000539241 PSMC6P62333 389 aa16.38■□□□□ 0.21
CCND1-204ENST00000539241 CCDC178Q5BJE1 867 aa16.38■□□□□ 0.21
CCND1-204ENST00000539241 RASIP1Q5U651 963 aa16.38■□□□□ 0.21
CCND1-204ENST00000539241 ZNF365Q70YC5 407 aa16.38■□□□□ 0.21
CCND1-204ENST00000539241 TIFAQ96CG3 184 aa16.38■□□□□ 0.21
CCND1-204ENST00000539241 UBA5Q9GZZ9 404 aa16.38■□□□□ 0.21
CCND1-204ENST00000539241 TRPV6Q9H1D0 765 aa16.38■□□□□ 0.21
CCND1-204ENST00000539241 IL23AQ9NPF7 189 aa16.38■□□□□ 0.21
CCND1-204ENST00000539241 LRRC37A2A6NM11 1700 aa16.38■□□□□ 0.21
CCND1-204ENST00000539241 PRUNE2Q8WUY3 3088 aa16.37■□□□□ 0.21
CCND1-204ENST00000539241 B4E1Z4 1266 aa16.37■□□□□ 0.21
CCND1-204ENST00000539241 B4GALT4O60513 344 aa16.37■□□□□ 0.21
CCND1-204ENST00000539241 EDNRBP24530 442 aa16.37■□□□□ 0.21
CCND1-204ENST00000539241 PDE4DQ08499 809 aa16.37■□□□□ 0.21
CCND1-204ENST00000539241 USH1GQ495M9 461 aa16.37■□□□□ 0.21
CCND1-204ENST00000539241 PNMA1Q8ND90 353 aa16.37■□□□□ 0.21
CCND1-204ENST00000539241 DNERQ8NFT8 737 aa16.37■□□□□ 0.21
CCND1-204ENST00000539241 OR6J1Q8NGC5 347 aa16.37■□□□□ 0.21
CCND1-204ENST00000539241 MPHOSPH6Q99547 160 aaKnown RBP16.37■□□□□ 0.21
CCND1-204ENST00000539241 DSCC1Q9BVC3 393 aa16.37■□□□□ 0.21
CCND1-204ENST00000539241 CPVLQ9H3G5 476 aa16.37■□□□□ 0.21
CCND1-204ENST00000539241 KAT14Q9H8E8 782 aa16.37■□□□□ 0.21
CCND1-204ENST00000539241 POLR3EQ9NVU0 708 aa16.37■□□□□ 0.21
CCND1-204ENST00000539241 UMODL1Q5DID0 1318 aa16.37■□□□□ 0.21
CCND1-204ENST00000539241 CPT1AP50416 773 aa16.36■□□□□ 0.21
CCND1-204ENST00000539241 CCL23P55773 120 aa16.36■□□□□ 0.21
CCND1-204ENST00000539241 GRIN2CQ14957 1233 aa16.36■□□□□ 0.21
CCND1-204ENST00000539241 PPP2R5BQ15173 497 aa16.36■□□□□ 0.21
CCND1-204ENST00000539241 CDC37Q16543 378 aaPredicted RBP16.36■□□□□ 0.21
CCND1-204ENST00000539241 IMMTQ16891 758 aaKnown RBP16.36■□□□□ 0.21
CCND1-204ENST00000539241 BMP2KLQ5H9B9 411 aa16.36■□□□□ 0.21
CCND1-204ENST00000539241 HERVK_113Q902F9 699 aa16.36■□□□□ 0.21
CCND1-204ENST00000539241 ANKS1AQ92625 1134 aa16.36■□□□□ 0.21
CCND1-204ENST00000539241 ZSCAN10Q96SZ4 725 aaPredicted RBP16.36■□□□□ 0.21
CCND1-204ENST00000539241 NOC4LQ9BVI4 516 aaKnown RBP16.36■□□□□ 0.21
CCND1-204ENST00000539241 ALDH8A1Q9H2A2 487 aaPredicted RBP16.36■□□□□ 0.21
CCND1-204ENST00000539241 ZNF576Q9H609 170 aa16.36■□□□□ 0.21
CCND1-204ENST00000539241 GRXCR1A8MXD5 290 aa16.35■□□□□ 0.21
CCND1-204ENST00000539241 B4DLN1 442 aa16.35■□□□□ 0.21
CCND1-204ENST00000539241 NKRFO15226 690 aaKnown RBP eCLIP16.35■□□□□ 0.21
CCND1-204ENST00000539241 MYL3P08590 195 aa16.35■□□□□ 0.21
CCND1-204ENST00000539241 PBX2P40425 430 aa16.35■□□□□ 0.21
CCND1-204ENST00000539241 MRPL12P52815 198 aaKnown RBP16.35■□□□□ 0.21
CCND1-204ENST00000539241 PURAQ00577 322 aaKnown RBP16.35■□□□□ 0.21
CCND1-204ENST00000539241 RGS22Q8NE09 1264 aa16.35■□□□□ 0.21
CCND1-204ENST00000539241 SCFD2Q8WU76 684 aa16.35■□□□□ 0.21
CCND1-204ENST00000539241 COL25A1Q9BXS0 654 aaPredicted RBP16.35■□□□□ 0.21
CCND1-204ENST00000539241 PBX4Q9BYU1 374 aa16.35■□□□□ 0.21
CCND1-204ENST00000539241 MTIF3Q9H2K0 278 aaKnown RBP16.35■□□□□ 0.21
CCND1-204ENST00000539241 GPHNQ9NQX3 736 aaPredicted RBP16.35■□□□□ 0.21
CCND1-204ENST00000539241 CTNNA3Q9UI47 895 aa16.35■□□□□ 0.21
CCND1-204ENST00000539241 LCTP09848 1927 aa16.35■□□□□ 0.21
CCND1-204ENST00000539241 FGBP02675 491 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms