RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 RNF208Q9H0X6 261 aa7.56□□□□□ -1.2
RFC1-204ENST00000502706 ANAPC4Q9UJX5 808 aa7.56□□□□□ -1.2
RFC1-204ENST00000502706 DHX29Q7Z478 1369 aaKnown RBP7.56□□□□□ -1.2
RFC1-204ENST00000502706 ZNF644Q9H582 1327 aaPredicted RBP7.55□□□□□ -1.2
RFC1-204ENST00000502706 TRBV23-1A0A0A0MS06 115 aa7.55□□□□□ -1.2
RFC1-204ENST00000502706 RFPL1O75677 317 aa7.55□□□□□ -1.2
RFC1-204ENST00000502706 NBPF7P0C2Y1 421 aaPredicted RBP7.55□□□□□ -1.2
RFC1-204ENST00000502706 U2AF1L5P0DN76 240 aaPredicted RBP7.55□□□□□ -1.2
RFC1-204ENST00000502706 SDSP20132 328 aa7.55□□□□□ -1.2
RFC1-204ENST00000502706 U2AF1Q01081 240 aaKnown RBP eCLIP7.55□□□□□ -1.2
RFC1-204ENST00000502706 STAT4Q14765 748 aa7.55□□□□□ -1.2
RFC1-204ENST00000502706 DHCR24Q15392 516 aa7.55□□□□□ -1.2
RFC1-204ENST00000502706 GRAMD1BQ3KR37 738 aa7.55□□□□□ -1.2
RFC1-204ENST00000502706 COL13A1Q5TAT6 717 aaPredicted RBP7.55□□□□□ -1.2
RFC1-204ENST00000502706 INTS3Q68E01 1043 aaKnown RBP7.55□□□□□ -1.2
RFC1-204ENST00000502706 SPATS2Q86XZ4 545 aaKnown RBP7.55□□□□□ -1.2
RFC1-204ENST00000502706 SULF2Q8IWU5 870 aa7.55□□□□□ -1.2
RFC1-204ENST00000502706 TP53INP2Q8IXH6 220 aa7.55□□□□□ -1.2
RFC1-204ENST00000502706 KLHDC7BQ96G42 594 aa7.55□□□□□ -1.2
RFC1-204ENST00000502706 SWAP70Q9UH65 585 aa7.55□□□□□ -1.2
RFC1-204ENST00000502706 FBXO9Q9UK97 447 aaPredicted RBP7.55□□□□□ -1.2
RFC1-204ENST00000502706 CCDC141Q6ZP82 1450 aa7.55□□□□□ -1.2
RFC1-204ENST00000502706 UGGT1Q9NYU2 1555 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 DEPDC5O75140 1603 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 TRAV20A0A0B4J274 112 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 FAM177BA6PVY3 158 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 ZSCAN20P17040 1043 aaPredicted RBP7.54□□□□□ -1.2
RFC1-204ENST00000502706 EPHA1P21709 976 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 ARNTP27540 789 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 LMOD3Q0VAK6 560 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 SCARA3Q6AZY7 606 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 FDX2Q6P4F2 183 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 NFXL1Q6ZNB6 911 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 SCUBE1Q8IWY4 988 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 JPH3Q8WXH2 748 aaPredicted RBP7.54□□□□□ -1.2
RFC1-204ENST00000502706 SLC7A3Q8WY07 619 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 WNT8BQ93098 351 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 GAL3ST3Q96A11 431 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 OSBPL1AQ9BXW6 950 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 KRTAP4-11Q9BYQ6 195 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 PPCSQ9HAB8 311 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 CASS4Q9NQ75 786 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 PCDHB10Q9UN67 800 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.54□□□□□ -1.2
RFC1-204ENST00000502706 CAMSAP2Q08AD1 1489 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 NLRP1Q9C000 1473 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 VWDEQ8N2E2 1590 aa7.54□□□□□ -1.2
RFC1-204ENST00000502706 LTBP3Q9NS15 1303 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 NPHP4O75161 1426 aaPredicted RBP7.53□□□□□ -1.2
RFC1-204ENST00000502706 CEP162Q5TB80 1403 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 PDE2AO00408 941 aaPredicted RBP7.53□□□□□ -1.2
RFC1-204ENST00000502706 GAS2O43903 313 aaKnown RBP7.53□□□□□ -1.2
RFC1-204ENST00000502706 F2P00734 622 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 F13BP05160 661 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 PTPRAP18433 802 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 MAP4P27816 1152 aaKnown RBP7.53□□□□□ -1.2
RFC1-204ENST00000502706 NEK4P51957 841 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 SLC7A5Q01650 507 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 PICALMQ13492 652 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 HSP90AA2PQ14568 343 aaPredicted RBP7.53□□□□□ -1.2
RFC1-204ENST00000502706 CXorf57Q6NSI4 855 aaKnown RBP7.53□□□□□ -1.2
RFC1-204ENST00000502706 ADAMTSL4Q6UY14 1074 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 LHFPL2Q6ZUX7 228 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 ANKLE2Q86XL3 938 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 THEMISQ8N1K5 641 aaPredicted RBP7.53□□□□□ -1.2
RFC1-204ENST00000502706 HHIPQ96QV1 700 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 RASSF4Q9H2L5 321 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 CLEC4MQ9H2X3 399 aaPredicted RBP7.53□□□□□ -1.2
RFC1-204ENST00000502706 FBRSQ9HAH7 460 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 IQGAP1P46940 1657 aa7.53□□□□□ -1.2
RFC1-204ENST00000502706 SYNMO15061 1565 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 MED14O60244 1454 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 A0A0U1RQG5 324 aaPredicted RBP7.52□□□□□ -1.21
RFC1-204ENST00000502706 NFKBIEO00221 500 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 TBX3O15119 743 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 HTR3BO95264 441 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 HSP90AA1P07900 732 aaKnown RBP7.52□□□□□ -1.21
RFC1-204ENST00000502706 NAT2P11245 290 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 TRIM27P14373 513 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 BDNFP23560 247 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 ZYXQ15942 572 aaKnown RBP7.52□□□□□ -1.21
RFC1-204ENST00000502706 TMEM95Q3KNT9 176 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 GNPTABQ3T906 1256 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 SV2CQ496J9 727 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 INO80DQ53TQ3 878 aaPredicted RBP7.52□□□□□ -1.21
RFC1-204ENST00000502706 ACBD5Q5T8D3 534 aaPredicted RBP7.52□□□□□ -1.21
RFC1-204ENST00000502706 KRBA2Q6ZNG9 492 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 PCGF5Q86SE9 256 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 AMOTL1Q8IY63 956 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 SPICE1Q8N0Z3 855 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 FBXL6Q8N531 539 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 GRIN3AQ8TCU5 1115 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 AARSD1Q9BTE6 412 aaKnown RBP7.52□□□□□ -1.21
RFC1-204ENST00000502706 PBX4Q9BYU1 374 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 LUC7LQ9NQ29 371 aaKnown RBP7.52□□□□□ -1.21
RFC1-204ENST00000502706 PRDM11Q9NQV5 511 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 ARHGEF4Q9NR80 690 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 SH2B1Q9NRF2 756 aaPredicted RBP7.52□□□□□ -1.21
RFC1-204ENST00000502706 OBP2AQ9NY56 170 aa7.52□□□□□ -1.21
RFC1-204ENST00000502706 GMIPQ9P107 970 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms