RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 MBD3O95983 291 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 MYCP01106 439 aaPredicted RBP8.84□□□□□ -0.99
CDC42-205ENST00000498236 SNHG28P0DPA3 235 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 AKR1B1P15121 316 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 U2AF2P26368 475 aaKnown RBP eCLIP8.84□□□□□ -0.993e-11■□□□□ 10.5
CDC42-205ENST00000498236 SMCPP49901 116 aaPredicted RBP8.84□□□□□ -0.99
CDC42-205ENST00000498236 MAP3K10Q02779 954 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 DNM1Q05193 864 aaKnown RBP8.84□□□□□ -0.99
CDC42-205ENST00000498236 TCP10Q12799 353 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 FERMT3Q86UX7 667 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 SIX5Q8N196 739 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 SRBD1Q8N5C6 995 aaKnown RBP8.84□□□□□ -0.99
CDC42-205ENST00000498236 MKL1Q969V6 931 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 SYT17Q9BSW7 474 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 PGAP2Q9UHJ9 254 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 DACH1Q9UI36 760 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 MAD2L2Q9UI95 211 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 CFAP45Q9UL16 551 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 STX8Q9UNK0 236 aa8.84□□□□□ -0.99
CDC42-205ENST00000498236 DICER1Q9UPY3 1922 aaKnown RBP8.84□□□□□ -1
CDC42-205ENST00000498236 CNTNAP5Q8WYK1 1306 aa8.83□□□□□ -1
CDC42-205ENST00000498236 ERVH48-1M5A8F1 160 aa8.83□□□□□ -1
CDC42-205ENST00000498236 WNT7AO00755 349 aa8.83□□□□□ -1
CDC42-205ENST00000498236 SIAH2O43255 324 aa8.83□□□□□ -1
CDC42-205ENST00000498236 PLEKHA8P1O95397 391 aa8.83□□□□□ -1
CDC42-205ENST00000498236 XBP1P17861 261 aa8.83□□□□□ -1
CDC42-205ENST00000498236 FSHRP23945 695 aa8.83□□□□□ -1
CDC42-205ENST00000498236 TNNI2P48788 182 aa8.83□□□□□ -1
CDC42-205ENST00000498236 GMPSP49915 693 aaPredicted RBP8.83□□□□□ -1
CDC42-205ENST00000498236 UBE2HP62256 183 aa8.83□□□□□ -1
CDC42-205ENST00000498236 AKAP17AQ02040 695 aaKnown RBP8.83□□□□□ -1
CDC42-205ENST00000498236 KIF23Q02241 960 aaPredicted RBP8.83□□□□□ -1
CDC42-205ENST00000498236 DHX9Q08211 1270 aaKnown RBP8.83□□□□□ -1
CDC42-205ENST00000498236 TNFAIP1Q13829 316 aa8.83□□□□□ -1
CDC42-205ENST00000498236 TRIM29Q14134 588 aa8.83□□□□□ -1
CDC42-205ENST00000498236 PKN1Q16512 942 aa8.83□□□□□ -1
CDC42-205ENST00000498236 CERKLQ49MI3 558 aaPredicted RBP8.83□□□□□ -1
CDC42-205ENST00000498236 KRT40Q6A162 431 aa8.83□□□□□ -1
CDC42-205ENST00000498236 TMEM179Q6ZVK1 233 aa8.83□□□□□ -1
CDC42-205ENST00000498236 USP48Q86UV5 1035 aa8.83□□□□□ -1
CDC42-205ENST00000498236 ZSCAN29Q8IWY8 852 aaPredicted RBP8.83□□□□□ -1
CDC42-205ENST00000498236 GPC2Q8N158 579 aa8.83□□□□□ -1
CDC42-205ENST00000498236 CHAMP1Q96JM3 812 aa8.83□□□□□ -1
CDC42-205ENST00000498236 ZNF396Q96N95 335 aaPredicted RBP8.83□□□□□ -1
CDC42-205ENST00000498236 CSRNP1Q96S65 589 aa8.83□□□□□ -1
CDC42-205ENST00000498236 SPZ1Q9BXG8 430 aa8.83□□□□□ -1
CDC42-205ENST00000498236 KANSL2Q9H9L4 492 aa8.83□□□□□ -1
CDC42-205ENST00000498236 NYAP2Q9P242 653 aa8.83□□□□□ -1
CDC42-205ENST00000498236 GMPR2Q9P2T1 348 aaKnown RBP8.83□□□□□ -1
CDC42-205ENST00000498236 KIAA1024Q9UPX6 916 aa8.83□□□□□ -1
CDC42-205ENST00000498236 CNPY2Q9Y2B0 182 aa8.83□□□□□ -1
CDC42-205ENST00000498236 PCDHGA11Q9Y5H2 935 aa8.83□□□□□ -1
CDC42-205ENST00000498236 GOLGB1Q14789 3259 aaKnown RBP8.83□□□□□ -1
CDC42-205ENST00000498236 ZNF541Q9H0D2 1346 aa8.82□□□□□ -1
CDC42-205ENST00000498236 MYH8P13535 1937 aa8.82□□□□□ -1
CDC42-205ENST00000498236 CLRN2A0PK11 232 aa8.82□□□□□ -1
CDC42-205ENST00000498236 TTC24A2A3L6 582 aaPredicted RBP8.82□□□□□ -1
CDC42-205ENST00000498236 TCP10L2B9ZVM9 353 aa8.82□□□□□ -1
CDC42-205ENST00000498236 PPFIA3O75145 1194 aa8.82□□□□□ -1
CDC42-205ENST00000498236 MMP1P03956 469 aa8.82□□□□□ -1
CDC42-205ENST00000498236 PARP1P09874 1014 aaKnown RBP8.82□□□□□ -1
CDC42-205ENST00000498236 GUCY1A2P33402 732 aa8.82□□□□□ -1
CDC42-205ENST00000498236 GRM5P41594 1212 aa8.82□□□□□ -1
CDC42-205ENST00000498236 SAFBQ15424 915 aaKnown RBP eCLIP8.82□□□□□ -1
CDC42-205ENST00000498236 PFKFB3Q16875 520 aaPredicted RBP8.82□□□□□ -1
CDC42-205ENST00000498236 NBPF9Q3BBW0 867 aa8.82□□□□□ -1
CDC42-205ENST00000498236 ASPRV1Q53RT3 343 aa8.82□□□□□ -1
CDC42-205ENST00000498236 OTUD7BQ6GQQ9 843 aa8.82□□□□□ -1
CDC42-205ENST00000498236 ARHGAP27Q6ZUM4 889 aa8.82□□□□□ -1
CDC42-205ENST00000498236 AIFM3Q96NN9 605 aa8.82□□□□□ -1
CDC42-205ENST00000498236 FOXP1Q9H334 677 aaPredicted RBP8.82□□□□□ -1
CDC42-205ENST00000498236 SH3GLB2Q9NR46 395 aa8.82□□□□□ -1
CDC42-205ENST00000498236 CNOT7Q9UIV1 285 aaKnown RBP8.82□□□□□ -1
CDC42-205ENST00000498236 RCOR1Q9UKL0 485 aa8.82□□□□□ -1
CDC42-205ENST00000498236 TLL2Q9Y6L7 1015 aa8.82□□□□□ -1
CDC42-205ENST00000498236 DDX49Q9Y6V7 483 aaKnown RBP8.82□□□□□ -1
CDC42-205ENST00000498236 KLRF2D3W0D1 207 aa8.81□□□□□ -1
CDC42-205ENST00000498236 DKK1O94907 266 aa8.81□□□□□ -1
CDC42-205ENST00000498236 PDHBP11177 359 aa8.81□□□□□ -1
CDC42-205ENST00000498236 SCG2P13521 617 aa8.81□□□□□ -1
CDC42-205ENST00000498236 NCLP19338 710 aaKnown RBP8.81□□□□□ -1
CDC42-205ENST00000498236 SEC13P55735 322 aa8.81□□□□□ -1
CDC42-205ENST00000498236 GUCY1B3Q02153 619 aa8.81□□□□□ -1
CDC42-205ENST00000498236 SWI5Q1ZZU3 235 aa8.81□□□□□ -1
CDC42-205ENST00000498236 ABCB5Q2M3G0 1257 aa8.81□□□□□ -1
CDC42-205ENST00000498236 FOXD4L6Q3SYB3 417 aaPredicted RBP8.81□□□□□ -1
CDC42-205ENST00000498236 GPATCH4Q5T3I0 446 aaKnown RBP8.81□□□□□ -1
CDC42-205ENST00000498236 FAM173BQ6P4H8 233 aa8.81□□□□□ -1
CDC42-205ENST00000498236 FOXD4L3Q6VB84 417 aaPredicted RBP8.81□□□□□ -1
CDC42-205ENST00000498236 CMTR1Q8N1G2 835 aaKnown RBP8.81□□□□□ -1
CDC42-205ENST00000498236 STAG2Q8N3U4 1231 aa8.81□□□□□ -1
CDC42-205ENST00000498236 GMCL1P1Q8NEA9 526 aa8.81□□□□□ -1
CDC42-205ENST00000498236 TPCN2Q8NHX9 752 aa8.81□□□□□ -1
CDC42-205ENST00000498236 GPT2Q8TD30 523 aa8.81□□□□□ -1
CDC42-205ENST00000498236 LEO1Q8WVC0 666 aaPredicted RBP8.81□□□□□ -1
CDC42-205ENST00000498236 CLP1Q92989 425 aaKnown RBP8.81□□□□□ -1
CDC42-205ENST00000498236 MRGPRX2Q96LB1 330 aa8.81□□□□□ -1
CDC42-205ENST00000498236 PHF20Q9BVI0 1012 aa8.81□□□□□ -1
CDC42-205ENST00000498236 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.81□□□□□ -1
CDC42-205ENST00000498236 GINM1Q9NU53 330 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms