RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 FAM160B2Q86V87 743 aa11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 COPS5Q92905 334 aa11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 COL25A1Q9BXS0 654 aaPredicted RBP11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 FOXD4L1Q9NU39 408 aa11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 FBXO40Q9UH90 709 aa11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 CCPG1Q9ULG6 757 aa11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 SYNPO2Q9UMS6 1093 aa11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 GBF1Q92538 1859 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 CCDC171Q6TFL3 1326 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 ARVCFO00192 962 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 DYNC1LI2O43237 492 aaPredicted RBP11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 PLA2G6O60733 806 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 TIMP1P01033 207 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 CD4P01730 458 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 SLC3A2P08195 630 aaKnown RBP11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 FPGSQ05932 587 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 GRIN2CQ14957 1233 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 TMEM240Q5SV17 173 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 SYDE2Q5VT97 1194 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 BTNL9Q6UXG8 535 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 KIAA1211Q6ZU35 1233 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 NOL8Q76FK4 1167 aaKnown RBP11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 TLK2Q86UE8 772 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 CHURC1Q8WUH1 139 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 VTI1AQ96AJ9 217 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 KIF2CQ99661 725 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 UBA5Q9GZZ9 404 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 LSG1Q9H089 658 aaKnown RBP11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 TRPV6Q9H1D0 765 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 ZNF287Q9HBT7 754 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 PRDM6Q9NQX0 595 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 CXXC1Q9P0U4 656 aaPredicted RBP11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 LAMA4Q16363 1823 aa11.97□□□□□ -0.49
SOX2-OT-215ENST00000493521 MOXD2PA6NHM9 499 aa11.96□□□□□ -0.49
SOX2-OT-215ENST00000493521 EPB41L2O43491 1005 aaKnown RBP11.96□□□□□ -0.49
SOX2-OT-215ENST00000493521 ICAM1P05362 532 aa11.96□□□□□ -0.49
SOX2-OT-215ENST00000493521 NKX3-2P78367 333 aa11.96□□□□□ -0.49
SOX2-OT-215ENST00000493521 LRRFIP1Q32MZ4 808 aaKnown RBP11.96□□□□□ -0.49
SOX2-OT-215ENST00000493521 TICAM2Q86XR7 235 aa11.96□□□□□ -0.49
SOX2-OT-215ENST00000493521 SLC43A3Q8NBI5 491 aa11.96□□□□□ -0.49
SOX2-OT-215ENST00000493521 DCAF4Q8WV16 495 aa11.96□□□□□ -0.49
SOX2-OT-215ENST00000493521 TOX2Q96NM4 488 aa11.96□□□□□ -0.49
SOX2-OT-215ENST00000493521 WNT8AQ9H1J5 351 aa11.96□□□□□ -0.49
SOX2-OT-215ENST00000493521 COL20A1Q9P218 1284 aa11.96□□□□□ -0.49
SOX2-OT-215ENST00000493521 TAF6LQ9Y6J9 622 aa11.96□□□□□ -0.49
SOX2-OT-215ENST00000493521 SCN5AQ14524 2016 aa11.96□□□□□ -0.5
SOX2-OT-215ENST00000493521 ELP1O95163 1332 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 A0A0U1RQG5 324 aaPredicted RBP11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 DCDC2CA8MYV0 355 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 B4GALT4O60513 344 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 ARIH2O95376 493 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 SNHG28P0DPA3 235 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 TOP1P11387 765 aaKnown RBP11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 CALML3P27482 149 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 ALDH5A1P51649 535 aaPredicted RBP11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 CCL23P55773 120 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 SMAD3P84022 425 aaKnown RBP11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 PTH1RQ03431 593 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 ZNF543Q08ER8 600 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 FSCN1Q16658 493 aaKnown RBP11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 SLC35G1Q2M3R5 365 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 AKNAD1Q5T1N1 836 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 MFSD5Q6N075 450 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 ZNF365Q70YC5 407 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 MORC4Q8TE76 937 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 NUP133Q8WUM0 1156 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 GLT1D1Q96MS3 346 aa11.95□□□□□ -0.5
SOX2-OT-215ENST00000493521 PTPDC1A2A3K4 754 aa11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 B4E1Z4 1266 aa11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 CYP2C9P11712 490 aa11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 MYOGP15173 224 aa11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 DNAJB2P25686 324 aa11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 ITGA7Q13683 1181 aa11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 COL9A3Q14050 684 aaPredicted RBP11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 USH1GQ495M9 461 aa11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 RASIP1Q5U651 963 aa11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 MAFAQ8NHW3 353 aaPredicted RBP11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 SCLYQ96I15 445 aa11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 PBX4Q9BYU1 374 aa11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 SENP2Q9HC62 589 aa11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 TCP11L1Q9NUJ3 509 aa11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 TRMT13Q9NUP7 481 aaKnown RBP11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 YBX2Q9Y2T7 364 aaKnown RBP11.94□□□□□ -0.5
SOX2-OT-215ENST00000493521 ZMYM6O95789 1325 aa11.93□□□□□ -0.5
SOX2-OT-215ENST00000493521 ASB14A6NK59 587 aa11.93□□□□□ -0.5
SOX2-OT-215ENST00000493521 KDM4AO75164 1064 aa11.93□□□□□ -0.5
SOX2-OT-215ENST00000493521 FDX1P10109 184 aa11.93□□□□□ -0.5
SOX2-OT-215ENST00000493521 HSPA4P34932 840 aa11.93□□□□□ -0.5
SOX2-OT-215ENST00000493521 RPS6P62753 249 aaKnown RBP11.93□□□□□ -0.5
SOX2-OT-215ENST00000493521 BECN1Q14457 450 aa11.93□□□□□ -0.5
SOX2-OT-215ENST00000493521 TKFCQ3LXA3 575 aa11.93□□□□□ -0.5
SOX2-OT-215ENST00000493521 PCSK9Q8NBP7 692 aaKnown RBP11.93□□□□□ -0.5
SOX2-OT-215ENST00000493521 XIRP2A4UGR9 3374 aa11.93□□□□□ -0.5
SOX2-OT-215ENST00000493521 ARHGEF15O94989 841 aa11.92□□□□□ -0.5
SOX2-OT-215ENST00000493521 RABGGTBP53611 331 aa11.92□□□□□ -0.5
SOX2-OT-215ENST00000493521 ADGRE1Q14246 886 aa11.92□□□□□ -0.5
SOX2-OT-215ENST00000493521 RABEP1Q15276 862 aa11.92□□□□□ -0.5
SOX2-OT-215ENST00000493521 MFSD6Q6ZSS7 791 aa11.92□□□□□ -0.5
SOX2-OT-215ENST00000493521 CYB5R4Q7L1T6 521 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms