RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 USP2O75604 605 aaPredicted RBP5.74□□□□□ -1.49
CD46-216ENST00000490278 C6orf222P0C671 652 aaPredicted RBP5.74□□□□□ -1.49
CD46-216ENST00000490278 CANXP27824 592 aaKnown RBP5.74□□□□□ -1.49
CD46-216ENST00000490278 GDNFP39905 211 aa5.74□□□□□ -1.49
CD46-216ENST00000490278 GABREP78334 506 aa5.74□□□□□ -1.49
CD46-216ENST00000490278 TKFCQ3LXA3 575 aa5.74□□□□□ -1.49
CD46-216ENST00000490278 KIAA0907Q7Z7F0 614 aaPredicted RBP5.74□□□□□ -1.49
CD46-216ENST00000490278 CPNE8Q86YQ8 564 aa5.74□□□□□ -1.49
CD46-216ENST00000490278 SPPL2CQ8IUH8 684 aa5.74□□□□□ -1.49
CD46-216ENST00000490278 CCDC103Q8IW40 242 aa5.74□□□□□ -1.49
CD46-216ENST00000490278 OXR1Q8N573 874 aa5.74□□□□□ -1.49
CD46-216ENST00000490278 PDZD8Q8NEN9 1154 aa5.74□□□□□ -1.49
CD46-216ENST00000490278 DIO2Q92813 273 aa5.74□□□□□ -1.49
CD46-216ENST00000490278 PTPRN2Q92932 1015 aa5.74□□□□□ -1.49
CD46-216ENST00000490278 MRPL4Q9BYD3 311 aaKnown RBP5.74□□□□□ -1.49
CD46-216ENST00000490278 TMEFF2Q9UIK5 374 aaPredicted RBP5.74□□□□□ -1.49
CD46-216ENST00000490278 NPFFR2Q9Y5X5 522 aa5.74□□□□□ -1.49
CD46-216ENST00000490278 FITM1A5D6W6 292 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 ARNTLO00327 626 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 RNASE1P07998 156 aaKnown RBP5.73□□□□□ -1.49
CD46-216ENST00000490278 LTBRP36941 435 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 CEBPAP49715 358 aaPredicted RBP5.73□□□□□ -1.49
CD46-216ENST00000490278 RTP1P59025 263 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 CHRNEQ04844 493 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 ZNF792Q3KQV3 632 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 FNDC3BQ53EP0 1204 aaKnown RBP5.73□□□□□ -1.49
CD46-216ENST00000490278 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 STYK1Q6J9G0 422 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 RSPO2Q6UXX9 243 aaPredicted RBP5.73□□□□□ -1.49
CD46-216ENST00000490278 CEP128Q6ZU80 1094 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 MAMDC2Q7Z304 686 aaPredicted RBP5.73□□□□□ -1.49
CD46-216ENST00000490278 SLCO6A1Q86UG4 719 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 JAMLQ86YT9 394 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 FAM177A1Q8N128 213 aaPredicted RBP5.73□□□□□ -1.49
CD46-216ENST00000490278 GPR27Q9NS67 375 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 C19orf73Q9NVV2 129 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 SFMBT1Q9UHJ3 866 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 CD2APQ9Y5K6 639 aa5.73□□□□□ -1.49
CD46-216ENST00000490278 WTIPA6NIX2 430 aaPredicted RBP5.72□□□□□ -1.49
CD46-216ENST00000490278 RAPGEF3O95398 923 aa5.72□□□□□ -1.49
CD46-216ENST00000490278 GP2P55259 537 aaKnown RBP5.72□□□□□ -1.49
CD46-216ENST00000490278 CBX2Q14781 532 aaPredicted RBP5.72□□□□□ -1.49
CD46-216ENST00000490278 SLC14A2Q15849 920 aa5.72□□□□□ -1.49
CD46-216ENST00000490278 INF2Q27J81 1249 aa5.72□□□□□ -1.49
CD46-216ENST00000490278 TRIM61Q5EBN2 209 aa5.72□□□□□ -1.49
CD46-216ENST00000490278 TAF7LQ5H9L4 462 aa5.72□□□□□ -1.49
CD46-216ENST00000490278 MBLAC2Q68D91 279 aa5.72□□□□□ -1.49
CD46-216ENST00000490278 KCNT2Q6UVM3 1135 aa5.72□□□□□ -1.49
CD46-216ENST00000490278 ABI1Q8IZP0 508 aa5.72□□□□□ -1.49
CD46-216ENST00000490278 RCBTB1Q8NDN9 531 aa5.72□□□□□ -1.49
CD46-216ENST00000490278 JMJD8Q96S16 334 aa5.72□□□□□ -1.49
CD46-216ENST00000490278 ZFYVE21Q9BQ24 234 aa5.72□□□□□ -1.49
CD46-216ENST00000490278 PHF20Q9BVI0 1012 aa5.72□□□□□ -1.49
CD46-216ENST00000490278 SLKQ9H2G2 1235 aaPredicted RBP5.72□□□□□ -1.49
CD46-216ENST00000490278 RC3H2Q9HBD1 1191 aaKnown RBP5.72□□□□□ -1.49
CD46-216ENST00000490278 NDOR1Q9UHB4 597 aa5.72□□□□□ -1.49
CD46-216ENST00000490278 C7orf72A4D263 438 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 AQP7O14520 342 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 KCNQ2O43526 872 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 MYO1BO43795 1136 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 NRDCO43847 1150 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 NPHS1O60500 1241 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 EFCAB14O75071 495 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 RFPL3O75679 317 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 HPXP02790 462 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 LCP1P13796 627 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 RAC2P15153 192 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 RBM10P98175 930 aaKnown RBP5.71□□□□□ -1.5
CD46-216ENST00000490278 PABPC4Q13310 644 aaKnown RBP eCLIP5.71□□□□□ -1.5
CD46-216ENST00000490278 NR0B2Q15466 257 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 HSF5Q4G112 596 aaPredicted RBP5.71□□□□□ -1.5
CD46-216ENST00000490278 IFNL3Q8IZI9 196 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 GSTCDQ8NEC7 633 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 SLC52A2Q9HAB3 445 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 CTNND2Q9UQB3 1225 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 PLAAQ9Y263 795 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 TRAF6Q9Y4K3 522 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 TIMM13Q9Y5L4 95 aaPredicted RBP5.71□□□□□ -1.5
CD46-216ENST00000490278 ASXL2Q76L83 1435 aa5.71□□□□□ -1.5
CD46-216ENST00000490278 GYS2P54840 703 aa5.7□□□□□ -1.5
CD46-216ENST00000490278 ERVFC1P60507 584 aa5.7□□□□□ -1.5
CD46-216ENST00000490278 GPR85P60893 370 aa5.7□□□□□ -1.5
CD46-216ENST00000490278 MCTP1Q6DN14 999 aa5.7□□□□□ -1.5
CD46-216ENST00000490278 GALNT18Q6P9A2 607 aa5.7□□□□□ -1.5
CD46-216ENST00000490278 NLGN2Q8NFZ4 835 aa5.7□□□□□ -1.5
CD46-216ENST00000490278 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.7□□□□□ -1.5
CD46-216ENST00000490278 SLC7A14Q8TBB6 771 aa5.7□□□□□ -1.5
CD46-216ENST00000490278 NINJ1Q92982 152 aa5.7□□□□□ -1.5
CD46-216ENST00000490278 CLUHP3Q96NS8 147 aa5.7□□□□□ -1.5
CD46-216ENST00000490278 PCDHA2Q9Y5H9 948 aa5.7□□□□□ -1.5
CD46-216ENST00000490278 TAF6LQ9Y6J9 622 aa5.7□□□□□ -1.5
CD46-216ENST00000490278 SBNO2Q9Y2G9 1366 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.69□□□□□ -1.5
CD46-216ENST00000490278 A0A1W2PQ27 194 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 A0A1W2PQ64 194 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 A0A1W2PQC6 194 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 A0A1W2PQD8 194 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 NOTOA8MTQ0 251 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 MSCO60682 206 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 NAT1P18440 290 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms