RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 VWA5AO00534 786 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 MEIS2O14770 477 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 NEMFO60524 1076 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 TDP2O95551 362 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 POLR2MP0CAP2 368 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 PTPREP23469 700 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 DSG3P32926 999 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 NDUFA8P51970 172 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 FKBP1BP68106 108 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 IRX3P78415 501 aaPredicted RBP7.86□□□□□ -1.15
PDAP1-203ENST00000488214 GRIN1Q05586 938 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 MKRN3Q13064 507 aaKnown RBP7.86□□□□□ -1.15
PDAP1-203ENST00000488214 PLS1Q14651 629 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 CAMK4Q16566 473 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 SPECC1Q5M775 1068 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 RESP18Q5W5W9 173 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 SNRNP48Q6IEG0 339 aaKnown RBP7.86□□□□□ -1.15
PDAP1-203ENST00000488214 CHADLQ6NUI6 762 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 SHC4Q6S5L8 630 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 CATSPERGQ6ZRH7 1159 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 FCHSD1Q86WN1 690 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 POTEDQ86YR6 584 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 C2orf69Q8N8R5 385 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 PROCA1Q8NCQ7 364 aaPredicted RBP7.86□□□□□ -1.15
PDAP1-203ENST00000488214 FERMT2Q96AC1 680 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 TNMDQ9H2S6 317 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 CLSTN2Q9H4D0 955 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 RNF146Q9NTX7 359 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 FAM13BQ9NYF5 915 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 PNMA2Q9UL42 364 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 KCNH4Q9UQ05 1017 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 PIK3CDO00329 1044 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 NFIBO00712 420 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 CXCL11O14625 94 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 SLC37A4O43826 429 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 FDX1P10109 184 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 CMA1P23946 247 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 GJA5P36382 358 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 SREBF1P36956 1147 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 UBXN2AP68543 259 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 ARHGAP4P98171 946 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 ORC2Q13416 577 aaPredicted RBP7.85□□□□□ -1.15
PDAP1-203ENST00000488214 SNAPC2Q13487 334 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 GSE1Q14687 1217 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 COG2Q14746 738 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 CALCRLQ16602 461 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 MUM1L1Q5H9M0 696 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 LDLRAD1Q5T700 205 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 MCTP2Q6DN12 878 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 SLC30A10Q6XR72 485 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 REPS2Q8NFH8 660 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 SYMPKQ92797 1274 aaKnown RBP7.85□□□□□ -1.15
PDAP1-203ENST00000488214 SLC10A4Q96EP9 437 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 P2RX7Q99572 595 aaKnown RBP7.85□□□□□ -1.15
PDAP1-203ENST00000488214 CSRNP2Q9H175 543 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 TMEM60Q9H2L4 133 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 EHMT1Q9H9B1 1298 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 DDX25Q9UHL0 483 aaKnown RBP7.85□□□□□ -1.15
PDAP1-203ENST00000488214 AGTPBP1Q9UPW5 1226 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 SRPRBQ9Y5M8 271 aaKnown RBP7.85□□□□□ -1.15
PDAP1-203ENST00000488214 MORC2Q9Y6X9 1032 aaPredicted RBP7.85□□□□□ -1.15
PDAP1-203ENST00000488214 LOXHD1Q8IVV2 1947 aa7.85□□□□□ -1.15
PDAP1-203ENST00000488214 LAD1O00515 517 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 FOSP01100 380 aaPredicted RBP7.84□□□□□ -1.15
PDAP1-203ENST00000488214 GCFC2P16383 781 aaKnown RBP7.84□□□□□ -1.15
PDAP1-203ENST00000488214 TXLNAP40222 546 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 PRPHP41219 470 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 SYKP43405 635 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 OAZ1P54368 228 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 ZNF445P59923 1031 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 PABPC4Q13310 644 aaKnown RBP eCLIP7.84□□□□□ -1.15
PDAP1-203ENST00000488214 SNW1Q13573 536 aaKnown RBP7.84□□□□□ -1.15
PDAP1-203ENST00000488214 TMEM132BQ14DG7 1078 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 TMEM266Q2M3C6 531 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 ARL6IP4Q66PJ3 421 aaKnown RBP7.84□□□□□ -1.15
PDAP1-203ENST00000488214 NSMFQ6X4W1 530 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 DTHD1Q6ZMT9 781 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 FASTKD5Q7L8L6 764 aaKnown RBP7.84□□□□□ -1.15
PDAP1-203ENST00000488214 MCF2L2Q86YR7 1114 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 TEX2Q8IWB9 1127 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 CKAP2LQ8IYA6 745 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 FMR1NBQ8N0W7 255 aaPredicted RBP7.84□□□□□ -1.15
PDAP1-203ENST00000488214 ZNF579Q8NAF0 562 aaKnown RBP7.84□□□□□ -1.15
PDAP1-203ENST00000488214 ENGASEQ8NFI3 743 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 RASSF8Q8NHQ8 419 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 CLEC4DQ8WXI8 215 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 TBC1D5Q92609 795 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 TRERF1Q96PN7 1200 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 NAP1L4Q99733 375 aaKnown RBP7.84□□□□□ -1.15
PDAP1-203ENST00000488214 PAGR1Q9BTK6 254 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 TEX13BQ9BXU2 312 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 ASCC2Q9H1I8 757 aaPredicted RBP7.84□□□□□ -1.15
PDAP1-203ENST00000488214 GPBP1L1Q9HC44 474 aaPredicted RBP7.84□□□□□ -1.15
PDAP1-203ENST00000488214 ZNF214Q9UL59 606 aaPredicted RBP7.84□□□□□ -1.15
PDAP1-203ENST00000488214 HPSEQ9Y251 543 aa7.84□□□□□ -1.15
PDAP1-203ENST00000488214 WDR81Q562E7 1941 aa7.84□□□□□ -1.16
PDAP1-203ENST00000488214 ZNFX1Q9P2E3 1918 aaKnown RBP7.84□□□□□ -1.16
PDAP1-203ENST00000488214 MCM3APO60318 1980 aa7.83□□□□□ -1.16
PDAP1-203ENST00000488214 CCL15-CCL14A0A0B4J2E2 113 aa7.83□□□□□ -1.16
PDAP1-203ENST00000488214 FAM237AA0A1B0GTK4 181 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms