RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 MRFAP1L1Q96HT8 127 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 TRIM54Q9BYV2 358 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 DNAJC25Q9H1X3 360 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 SUN2Q9UH99 717 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.88□□□□□ -1.47
USF3-202ENST00000478658 VPS8Q8N3P4 1428 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 TEX46H3BTG2 121 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 RLBP1P12271 317 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 HPDP32754 393 aaPredicted RBP5.88□□□□□ -1.47
USF3-202ENST00000478658 PDAP1Q13442 181 aaKnown RBP5.88□□□□□ -1.47
USF3-202ENST00000478658 RASGRF1Q13972 1273 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 TJAP1Q5JTD0 557 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 PEG10Q86TG7 708 aaKnown RBP5.88□□□□□ -1.47
USF3-202ENST00000478658 UBE2Q2Q8WVN8 375 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 ESR2Q92731 530 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 MINK1Q8N4C8 1332 aaPredicted RBP5.88□□□□□ -1.47
USF3-202ENST00000478658 PTGES3LE9PB15 166 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 DNAJC6O75061 913 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 ATP2C2O75185 946 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 ATP2B4P23634 1241 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 SKP1P63208 163 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 DCUN1D2Q6PH85 259 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 OTOAQ7RTW8 1153 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 NUDCD3Q8IVD9 361 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 MIGA1Q8NAN2 632 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 AP1G2O75843 785 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 KRT38O76015 456 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 GJC1P36383 396 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 TRPC1P48995 793 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 PLCD1P51178 756 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 PKD2Q13563 968 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 HIF1AQ16665 826 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 SLC9C1Q4G0N8 1177 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 TRAF7Q6Q0C0 670 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 NEK8Q86SG6 692 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 NOSTRINQ8IVI9 506 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 NME8Q8N427 588 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 DNAJC7Q99615 494 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 OSBPL1AQ9BXW6 950 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 BLOC1S6Q9UL45 172 aa5.88□□□□□ -1.47
USF3-202ENST00000478658 RHOBTB1O94844 696 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 HLA-DPA1P20036 260 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 NSFP46459 744 aaKnown RBP5.87□□□□□ -1.47
USF3-202ENST00000478658 NBPF20Q3BBV1 942 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 NBPF10Q6P3W6 841 aaKnown RBP5.87□□□□□ -1.47
USF3-202ENST00000478658 C10orf88Q9H8K7 445 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 AS3MTQ9HBK9 375 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 ATICP31939 592 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 ICA1Q05084 483 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 AHI1Q8N157 1196 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 APPL2Q8NEU8 664 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 MAN1C1Q9NR34 630 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 TMOD3Q9NYL9 352 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 TELO2Q9Y4R8 837 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 ENC1O14682 589 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 SCGB2A1O75556 95 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 S100A9P06702 114 aaKnown RBP5.87□□□□□ -1.47
USF3-202ENST00000478658 MYBL2P10244 700 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 TNFAIP1Q13829 316 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 TMTC3Q6ZXV5 915 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 PPP1R14AQ96A00 147 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 PHACTR3Q96KR7 559 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 COPRSQ9NQ92 184 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 ARHGEF3Q9NR81 526 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 ZC3H7BQ9UGR2 993 aaKnown RBP5.87□□□□□ -1.47
USF3-202ENST00000478658 SFMBT1Q9UHJ3 866 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 KDM3AQ9Y4C1 1321 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 ST20-MTHFSA0A0A6YYL1 179 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 TMEM110-MUSTN1A8MSY1 372 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 CHUKO15111 745 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 GPC4O75487 556 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 STAM2O75886 525 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 NCAM1P13591 858 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 S100A5P33763 92 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 MTHFSP49914 203 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 PAK2Q13177 524 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 SNX1Q13596 522 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 UAP1Q16222 522 aaPredicted RBP5.87□□□□□ -1.47
USF3-202ENST00000478658 CDC37Q16543 378 aaPredicted RBP5.87□□□□□ -1.47
USF3-202ENST00000478658 BMP2KLQ5H9B9 411 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 KANK4Q5T7N3 995 aaPredicted RBP5.87□□□□□ -1.47
USF3-202ENST00000478658 ATAD3BQ5T9A4 648 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 SLC30A9Q6PML9 568 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 TBC1D9Q6ZT07 1266 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 KRT74Q7RTS7 529 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 FSTL5Q8N475 847 aaPredicted RBP5.87□□□□□ -1.47
USF3-202ENST00000478658 UBN1Q9NPG3 1134 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 LDOC1O95751 146 aaPredicted RBP5.87□□□□□ -1.47
USF3-202ENST00000478658 IMPDH2P12268 514 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 ANXA13P27216 316 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 PLS1Q14651 629 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 KRT71Q3SY84 523 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 DAB2IPQ5VWQ8 1189 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 ANKS6Q68DC2 871 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 EHD2Q9NZN4 543 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 SPACA6W5XKT8 324 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 CAMSAP2Q08AD1 1489 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 POTEMA6NI47 508 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 HSPA4LO95757 839 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 GRK2P25098 689 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms