RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 FAM50BQ9Y247 325 aa8.12□□□□□ -1.11
SF3A3-205ENST00000470585 COG6Q9Y2V7 657 aa8.12□□□□□ -1.11
SF3A3-205ENST00000470585 UMODL1Q5DID0 1318 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 RBM47A0AV96 593 aaKnown RBP8.11□□□□□ -1.11
SF3A3-205ENST00000470585 DYNC1LI2O43237 492 aaPredicted RBP8.11□□□□□ -1.11
SF3A3-205ENST00000470585 IFIT2P09913 472 aaKnown RBP8.11□□□□□ -1.11
SF3A3-205ENST00000470585 BMP3P12645 472 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 SMPD1P17405 629 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 RABGGTBP53611 331 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 PURAQ00577 322 aaKnown RBP8.11□□□□□ -1.11
SF3A3-205ENST00000470585 BEX3Q00994 111 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 TTLL4Q14679 1199 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 RCSD1Q6JBY9 416 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 TAPT1Q6NXT6 567 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 FAM178BQ8IXR5 827 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 CPXCR1Q8N123 301 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 MICALL1Q8N3F8 863 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 RETREG2Q8NC44 543 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 AFAP1L1Q8TED9 768 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 KIFC2Q96AC6 838 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 CLUAP1Q96AJ1 413 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 MPHOSPH6Q99547 160 aaKnown RBP8.11□□□□□ -1.11
SF3A3-205ENST00000470585 MTG1Q9BT17 334 aaPredicted RBP8.11□□□□□ -1.11
SF3A3-205ENST00000470585 TRPV6Q9H1D0 765 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 MKNK2Q9HBH9 465 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 RAVER2Q9HCJ3 691 aaKnown RBP8.11□□□□□ -1.11
SF3A3-205ENST00000470585 GPHNQ9NQX3 736 aaPredicted RBP8.11□□□□□ -1.11
SF3A3-205ENST00000470585 CYP39A1Q9NYL5 469 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 PRKAG3Q9UGI9 489 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 CTNNA3Q9UI47 895 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 SLC4A4Q9Y6R1 1079 aa8.11□□□□□ -1.11
SF3A3-205ENST00000470585 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.1□□□□□ -1.11
SF3A3-205ENST00000470585 B4DLN1 442 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 NCK2O43639 380 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 PRKAB2O43741 272 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 RAD21O60216 631 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 LPXNO60711 386 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 IQCF3P0C7M6 154 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 MS4A1P11836 297 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 MYOGP15173 224 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 KCNJ6P48051 423 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 MRPL12P52815 198 aaKnown RBP8.1□□□□□ -1.11
SF3A3-205ENST00000470585 CNTN2Q02246 1040 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 GRB10Q13322 594 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 PKN1Q16512 942 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 SESTD1Q86VW0 696 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 GJD3Q8N144 294 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 STAG1Q8WVM7 1258 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 SAMD11Q96NU1 681 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 TGS1Q96RS0 853 aaKnown RBP8.1□□□□□ -1.11
SF3A3-205ENST00000470585 DNAJC2Q99543 621 aaKnown RBP8.1□□□□□ -1.11
SF3A3-205ENST00000470585 PRRX2Q99811 253 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 CHMP4BQ9H444 224 aaKnown RBP8.1□□□□□ -1.11
SF3A3-205ENST00000470585 UBE2ZQ9H832 354 aaPredicted RBP8.1□□□□□ -1.11
SF3A3-205ENST00000470585 RNF146Q9NTX7 359 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 EXOC6BQ9Y2D4 811 aa8.1□□□□□ -1.11
SF3A3-205ENST00000470585 TET1Q8NFU7 2136 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 ZNF536O15090 1300 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 COL4A6Q14031 1691 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 ABHD14A-ACY1A0A1B0GW23 586 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 SOWAHBA6NEL2 793 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 A6NJR5 290 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 ZFYP08048 801 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-205ENST00000470585 MRE11P49959 708 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 ERVK-21P61565 698 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 IRX5P78411 483 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-205ENST00000470585 COL19A1Q14993 1142 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 ITPRIPQ8IWB1 547 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 ZNF444Q8N0Y2 327 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-205ENST00000470585 DNERQ8NFT8 737 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 NEDD1Q8NHV4 660 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 ARNTL2Q8WYA1 636 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 SCLYQ96I15 445 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 TRERF1Q96PN7 1200 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 STRBPQ96SI9 672 aaKnown RBP8.09□□□□□ -1.11
SF3A3-205ENST00000470585 NUP88Q99567 741 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-205ENST00000470585 RAD9AQ99638 391 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 UPF3BQ9BZI7 483 aaKnown RBP8.09□□□□□ -1.11
SF3A3-205ENST00000470585 CLIP2Q9UDT6 1046 aa8.09□□□□□ -1.11
SF3A3-205ENST00000470585 CYP2D7A0A087X1C5 515 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 POTEB3A0JP26 581 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 EPOPA6NHQ4 379 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 GSG1L2A8MUP6 293 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 CCER2I3L3R5 266 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 DCXO43602 365 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 GJB5O95377 273 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 SEC24BO95487 1268 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 CXCL10P02778 98 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 ICAM1P05362 532 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 SLC3A2P08195 630 aaKnown RBP8.08□□□□□ -1.12
SF3A3-205ENST00000470585 FOXK2Q01167 660 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 PDE4BQ07343 736 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 PTPROQ16827 1216 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 CSPP1Q1MSJ5 1256 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 TIGD5Q53EQ6 642 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 SLFN13Q68D06 897 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 CNKSR3Q6P9H4 555 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 POTEBQ6S5H4 581 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 KIAA1211Q6ZU35 1233 aa8.08□□□□□ -1.12
SF3A3-205ENST00000470585 ALYREFQ86V81 257 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms