RNA–Protein interactions for RNA: ENST00000466832.5

TRA2B-209, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-209ENST00000466832 PCDHA7Q9UN72 937 aa6.61□□□□□ -1.35
TRA2B-209ENST00000466832 SLC12A7Q9Y666 1083 aa6.61□□□□□ -1.35
TRA2B-209ENST00000466832 NEDD4P46934 1319 aa6.61□□□□□ -1.35
TRA2B-209ENST00000466832 LAMA3Q16787 3333 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 CCDC69A6NI79 296 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 KIF2AO00139 706 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-209ENST00000466832 SCAMP3O14828 347 aaKnown RBP6.6□□□□□ -1.35
TRA2B-209ENST00000466832 BACH1O14867 736 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 TREHO43280 583 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 ORC4O43929 436 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 MBD4O95243 580 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 IARSP41252 1262 aaKnown RBP6.6□□□□□ -1.35
TRA2B-209ENST00000466832 ME1P48163 572 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 NLRP12P59046 1061 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 SAFBQ15424 915 aaKnown RBP eCLIP6.6□□□□□ -1.35
TRA2B-209ENST00000466832 SBK1Q52WX2 424 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 RILPL1Q5EBL4 403 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 TMEM67Q5HYA8 995 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 AXDND1Q5T1B0 1012 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-209ENST00000466832 CYB5R4Q7L1T6 521 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 MAGEB6Q8N7X4 407 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 TRIML1Q8N9V2 468 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 MYRIPQ8NFW9 859 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 UBE2Q2Q8WVN8 375 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 KCTD15Q96SI1 283 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-209ENST00000466832 MTRQ99707 1265 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 LRRC2Q9BYS8 371 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 OSBPL5Q9H0X9 879 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-209ENST00000466832 GOLPH3LQ9H4A5 285 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 TUBE1Q9UJT0 475 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 NIP7Q9Y221 180 aaKnown RBP eCLIP6.6□□□□□ -1.35
TRA2B-209ENST00000466832 CDK5RAP2Q96SN8 1893 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 COL1A1P02452 1464 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-209ENST00000466832 FZD9O00144 591 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 RPS6KA4O75676 772 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 XBP1P17861 261 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 ZNF157P51786 506 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-209ENST00000466832 PTPAQ15257 358 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 CAVIN4Q5BKX8 364 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 RESP18Q5W5W9 173 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 SPTY2D1Q68D10 685 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-209ENST00000466832 KRT40Q6A162 431 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 KANK3Q6NY19 840 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 SCG3Q8WXD2 468 aaKnown RBP6.6□□□□□ -1.35
TRA2B-209ENST00000466832 ESR2Q92731 530 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 VTI1AQ96AJ9 217 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 CCDC34Q96HJ3 373 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 NCOA5Q9HCD5 579 aaKnown RBP6.6□□□□□ -1.35
TRA2B-209ENST00000466832 MUC6Q6W4X9 2439 aa6.6□□□□□ -1.35
TRA2B-209ENST00000466832 MMP1P03956 469 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 SLC3A2P08195 630 aaKnown RBP6.59□□□□□ -1.35
TRA2B-209ENST00000466832 MPSTP25325 297 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 ERCC5P28715 1186 aaPredicted RBP6.59□□□□□ -1.35
TRA2B-209ENST00000466832 TM4SF1P30408 202 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 SCTRP47872 440 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 PPARAQ07869 468 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 CHAF1AQ13111 956 aaPredicted RBP6.59□□□□□ -1.35
TRA2B-209ENST00000466832 WTAPQ15007 396 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 RTN1Q16799 776 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 FAM173BQ6P4H8 233 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 THSD4Q6ZMP0 1018 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 VPS37DQ86XT2 251 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 CCDC150Q8NCX0 1101 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 UBXN4Q92575 508 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 ANKS1AQ92625 1134 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.59□□□□□ -1.35
TRA2B-209ENST00000466832 DACH1Q9UI36 760 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 MAP4K5Q9Y4K4 846 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 COL4A1P02462 1669 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 IFIT3O14879 490 aaKnown RBP6.59□□□□□ -1.35
TRA2B-209ENST00000466832 CCP110O43303 1012 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 CBFA2T2O43439 604 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 HOXA7P31268 230 aaPredicted RBP6.59□□□□□ -1.35
TRA2B-209ENST00000466832 TRAPPC10P48553 1259 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 SCNN1DP51172 638 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 HAND2P61296 217 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 ERVK-9P63128 1117 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 SH3BP2P78314 561 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 SEC23AQ15436 765 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 ZRSR1Q15695 479 aaKnown RBP6.59□□□□□ -1.35
TRA2B-209ENST00000466832 PI16Q6UXB8 463 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 DHX40Q8IX18 779 aaKnown RBP6.59□□□□□ -1.35
TRA2B-209ENST00000466832 MAFAQ8NHW3 353 aaPredicted RBP6.59□□□□□ -1.35
TRA2B-209ENST00000466832 RIOK1Q9BRS2 568 aaKnown RBP6.59□□□□□ -1.35
TRA2B-209ENST00000466832 ATP8A2Q9NTI2 1148 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 ARPP21Q9UBL0 812 aaPredicted RBP6.59□□□□□ -1.35
TRA2B-209ENST00000466832 PGAP2Q9UHJ9 254 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 IQSEC3Q9UPP2 1182 aaPredicted RBP6.59□□□□□ -1.35
TRA2B-209ENST00000466832 SLC4A4Q9Y6R1 1079 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 IRS2Q9Y4H2 1338 aa6.59□□□□□ -1.35
TRA2B-209ENST00000466832 BAZ2AQ9UIF9 1905 aaKnown RBP6.59□□□□□ -1.36
TRA2B-209ENST00000466832 B4E1Z4 1266 aa6.58□□□□□ -1.36
TRA2B-209ENST00000466832 AP5Z1O43299 807 aa6.58□□□□□ -1.36
TRA2B-209ENST00000466832 PRPF3O43395 683 aaKnown RBP6.58□□□□□ -1.36
TRA2B-209ENST00000466832 APPP05067 770 aa6.58□□□□□ -1.36
TRA2B-209ENST00000466832 TDO2P48775 406 aa6.58□□□□□ -1.36
TRA2B-209ENST00000466832 RAB15P59190 212 aa6.58□□□□□ -1.36
TRA2B-209ENST00000466832 HDLBPQ00341 1268 aaKnown RBP6.58□□□□□ -1.36
TRA2B-209ENST00000466832 INTS6LQ5JSJ4 861 aaKnown RBP6.58□□□□□ -1.36
TRA2B-209ENST00000466832 NT5DC1Q5TFE4 455 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms