RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 TOP6BLQ8N6T0 577 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 MAGEB6Q8N7X4 407 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 CHTF18Q8WVB6 975 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 JPH3Q8WXH2 748 aaPredicted RBP5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 SPOCK3Q9BQ16 436 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 MENTQ9BUN1 341 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 DUSP23Q9BVJ7 150 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 GPR27Q9NS67 375 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 B4GALT6Q9UBX8 382 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 APOBEC2Q9Y235 224 aaKnown RBP5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 SPEF1Q9Y4P9 236 aa5.57□□□□□ -1.52
HMGN3P1-201ENST00000453847 E2F8A0AVK6 867 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 SRGAP2CP0DJJ0 459 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 PLS3P13797 630 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 GMPRP36959 345 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 TRIM28Q13263 835 aaKnown RBP5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 NMIQ13287 307 aaPredicted RBP5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 PCBP2Q15366 365 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 SYCP2LQ5T4T6 812 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 MBLAC2Q68D91 279 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 DDX53Q86TM3 631 aaKnown RBP5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 TPH2Q8IWU9 490 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 RCBTB1Q8NDN9 531 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 IRF7Q92985 503 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 FUBP3Q96I24 572 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 HEXIM2Q96MH2 286 aaKnown RBP5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 GPR101Q96P66 508 aaPredicted RBP5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 ZFYVE21Q9BQ24 234 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 DSCC1Q9BVC3 393 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 SLC12A9Q9BXP2 914 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 HDAC8Q9BY41 377 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 CDIP1Q9H305 208 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 AKTIPQ9H8T0 292 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 RRAGCQ9HB90 399 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 EMC7Q9NPA0 242 aa5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 THG1LQ9NWX6 298 aaKnown RBP5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 H2AFY2Q9P0M6 372 aaPredicted RBP5.56□□□□□ -1.52
HMGN3P1-201ENST00000453847 WNT9AO14904 365 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 TGM5O43548 720 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 ARHGEF15O94989 841 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 GSNP06396 782 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 CD3EP07766 207 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 SRFP11831 508 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 NOS3P29474 1203 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 GRIK1P39086 918 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 IARSP41252 1262 aaKnown RBP5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 LSSP48449 732 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 IL2P60568 153 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 POU4F1Q01851 419 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 ODF1Q14990 250 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 PTPN21Q16825 1174 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 INF2Q27J81 1249 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 TMEM177Q53S58 311 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 MTDHQ86UE4 582 aaKnown RBP5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 ARMC10Q8N2F6 343 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 CLRN3Q8NCR9 226 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 SLC16A10Q8TF71 515 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 CELF4Q9BZC1 486 aaKnown RBP5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 TCF7L1Q9HCS4 588 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 ENAMQ9NRM1 1142 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 CLEC1BQ9P126 229 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 PPARGC1AQ9UBK2 798 aaKnown RBP5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 IP6K2Q9UHH9 426 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 BACE2Q9Y5Z0 518 aa5.55□□□□□ -1.52
HMGN3P1-201ENST00000453847 WASH4PA8MWX3 477 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 MEFVO15553 781 aaPredicted RBP5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 PCDHGA12O60330 932 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 CBX7O95931 251 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 KRT18P05783 430 aaKnown RBP5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 VAV1P15498 845 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 LTBRP36941 435 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 TNK2Q07912 1038 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 PAK1Q13153 545 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 TCIRG1Q13488 830 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 ATP13A4Q4VNC1 1196 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 RTP2Q5QGT7 225 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 PODNQ7Z5L7 613 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 CMIPQ8IY22 773 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 SHISA5Q8N114 240 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 GATA6Q92908 595 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 LENG1Q96BZ8 264 aaPredicted RBP5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 DUSP15Q9H1R2 295 aaPredicted RBP5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 FBXL7Q9UJT9 491 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 TPX2Q9ULW0 747 aaKnown RBP5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 PCDHGA9Q9Y5G4 932 aaKnown RBP5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 PCDHGA8Q9Y5G5 932 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 PCDHGA7Q9Y5G6 932 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 PCDHGA6Q9Y5G7 932 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 PCDHGA3Q9Y5H0 932 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 PCDHGA2Q9Y5H1 932 aa5.54□□□□□ -1.52
HMGN3P1-201ENST00000453847 EIF3JO75822 258 aaKnown RBP5.53□□□□□ -1.52
HMGN3P1-201ENST00000453847 SOD2P04179 222 aa5.53□□□□□ -1.52
HMGN3P1-201ENST00000453847 BMP3P12645 472 aa5.53□□□□□ -1.52
HMGN3P1-201ENST00000453847 GLB1P16278 677 aa5.53□□□□□ -1.52
HMGN3P1-201ENST00000453847 MAP4P27816 1152 aaKnown RBP5.53□□□□□ -1.52
HMGN3P1-201ENST00000453847 E4F1Q66K89 784 aaPredicted RBP5.53□□□□□ -1.52
HMGN3P1-201ENST00000453847 IQSEC1Q6DN90 963 aa5.53□□□□□ -1.52
HMGN3P1-201ENST00000453847 TMED8Q6PL24 325 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms