RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 RUFY2Q8WXA3 655 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 HERPUD2Q9BSE4 406 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 RHOBTB2Q9BYZ6 727 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 TM6SF1Q9BZW5 370 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 UTP6Q9NYH9 597 aaKnown RBP8.84□□□□□ -0.99
BRCC3-208ENST00000453705 DDX20Q9UHI6 824 aaKnown RBP8.84□□□□□ -0.99
BRCC3-208ENST00000453705 DMTF1Q9Y222 760 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 CNTNAP4Q9C0A0 1308 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 IPO7O95373 1038 aaKnown RBP8.83□□□□□ -1
BRCC3-208ENST00000453705 MYL6BP14649 208 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 STIP1P31948 543 aaKnown RBP8.83□□□□□ -1
BRCC3-208ENST00000453705 CLCN6P51797 869 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 SWI5Q1ZZU3 235 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 MAP7D1Q3KQU3 841 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 KIF6Q6ZMV9 814 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 TTLL7Q6ZT98 887 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 FAM26EQ8N5C1 309 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 ZBTB38Q8NAP3 1195 aaPredicted RBP8.83□□□□□ -1
BRCC3-208ENST00000453705 SLC4A9Q96Q91 983 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 NUDT12Q9BQG2 462 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 RRN3Q9NYV6 651 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 MAST2Q6P0Q8 1798 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 UBR3Q6ZT12 1888 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 QSER1Q2KHR3 1735 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 LINC00854A0A1B0GVQ3 168 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 OATP04181 439 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 MPSTP25325 297 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 GUCA2AQ02747 115 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 ASIC2Q16515 512 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 TSGA10IPQ3SY00 556 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 FKBP15Q5T1M5 1219 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 BTN2A1Q7KYR7 527 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 CATSPER4Q7RTX7 472 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 ZNF34Q8IZ26 560 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 POF1BQ8WVV4 589 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 ANAPC16Q96DE5 110 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 RBCK1Q9BYM8 510 aa8.83□□□□□ -1
BRCC3-208ENST00000453705 LSG1Q9H089 658 aaKnown RBP8.83□□□□□ -1
BRCC3-208ENST00000453705 A0A087WZG4 1122 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 TNFRSF21O75509 655 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 KIF20AO95235 890 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 CD4P01730 458 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 SLC5A1P13866 664 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 CUL4AQ13619 759 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 SLC45A4Q5BKX6 768 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 IGF2-ASQ6U949 168 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 SPOCD1Q6ZMY3 1216 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 ATG9AQ7Z3C6 839 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 TBC1D1Q86TI0 1168 aaPredicted RBP8.82□□□□□ -1
BRCC3-208ENST00000453705 DNAJC10Q8IXB1 793 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 TCEAL8Q8IYN2 117 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 GIMAP1Q8WWP7 306 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 CRELD1Q96HD1 420 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 CFHR5Q9BXR6 569 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 GIMAP2Q9UG22 337 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 NOD1Q9Y239 953 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 AFG3L2Q9Y4W6 797 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 A0A0B4J203 849 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 CTAGE5O15320 804 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 BBOX1O75936 387 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 A1BGP04217 495 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 XRCC6P12956 609 aaKnown RBP eCLIP8.82□□□□□ -1
BRCC3-208ENST00000453705 HTR3AP46098 478 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 SH3BGRP55822 239 aaPredicted RBP8.82□□□□□ -1
BRCC3-208ENST00000453705 ITKQ08881 620 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 AIMP1Q12904 312 aaKnown RBP8.82□□□□□ -1
BRCC3-208ENST00000453705 TNNI3KQ59H18 835 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 FIP1L1Q6UN15 594 aaKnown RBP8.82□□□□□ -1
BRCC3-208ENST00000453705 MTERF4Q7Z6M4 381 aaKnown RBP8.82□□□□□ -1
BRCC3-208ENST00000453705 VPS52Q8N1B4 723 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 CARNMT1Q8N4J0 409 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 TRPM4Q8TD43 1214 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 EAF2Q96CJ1 260 aaPredicted RBP8.82□□□□□ -1
BRCC3-208ENST00000453705 INTS4Q96HW7 963 aaKnown RBP8.82□□□□□ -1
BRCC3-208ENST00000453705 SARGQ9BW04 601 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 GTPBP4Q9BZE4 634 aaKnown RBP8.82□□□□□ -1
BRCC3-208ENST00000453705 FANCFQ9NPI8 374 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 FPGT-TNNI3KV9GXZ4 949 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 DUOX1Q9NRD9 1551 aa8.82□□□□□ -1
BRCC3-208ENST00000453705 BRWD3Q6RI45 1802 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 A0A087X0B3 334 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 SLC27A2O14975 620 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 ZBTB24O43167 697 aaPredicted RBP8.81□□□□□ -1
BRCC3-208ENST00000453705 CYP2E1P05181 493 aaPredicted RBP8.81□□□□□ -1
BRCC3-208ENST00000453705 TPM3P06753 285 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 BCAMP50895 628 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 SCNN1DP51172 638 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 CACNB2Q08289 660 aaPredicted RBP8.81□□□□□ -1
BRCC3-208ENST00000453705 IRGCQ6NXR0 463 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 TRIM22Q8IYM9 498 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 EFR3BQ9Y2G0 817 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 HCN4Q9Y3Q4 1203 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 TIAM2Q8IVF5 1701 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 SH3TC1Q8TE82 1336 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 RPAP1Q9BWH6 1393 aaPredicted RBP8.81□□□□□ -1
BRCC3-208ENST00000453705 J3KRW8 73 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 EYA2O00167 538 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 STXBP3O00186 592 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 ST18O60284 1047 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 PDE8AO60658 829 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms