RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SCO2A0A1W2PP80 73 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 PDHXO00330 501 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 ADAM11O75078 769 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 ALADP13716 330 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 CDC25BP30305 580 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 SUPT20HL1Q3ZLR7 823 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 TTC39BQ5VTQ0 682 aaPredicted RBP6.74□□□□□ -1.33
SDCBP-205ENST00000447267 SULT6B1Q6IMI4 303 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 PRR23CQ6ZRP0 262 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 CCDC129Q6ZRS4 1044 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 DDX46Q7L014 1031 aaKnown RBP6.74□□□□□ -1.33
SDCBP-205ENST00000447267 DGLUCYQ7Z3D6 616 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 GTF3C2Q8WUA4 911 aaPredicted RBP6.74□□□□□ -1.33
SDCBP-205ENST00000447267 UBL7Q96S82 380 aaPredicted RBP6.74□□□□□ -1.33
SDCBP-205ENST00000447267 EYA3Q99504 573 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 PBX4Q9BYU1 374 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 MRPL18Q9H0U6 180 aaKnown RBP6.74□□□□□ -1.33
SDCBP-205ENST00000447267 FAM13BQ9NYF5 915 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 ATP11BQ9Y2G3 1177 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 PPME1Q9Y570 386 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 PCDHAC2Q9Y5I4 1007 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 GTF3C3Q9Y5Q9 886 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 CFAP47Q6ZTR5 3102 aa6.74□□□□□ -1.33
SDCBP-205ENST00000447267 TPRP12270 2363 aaKnown RBP6.73□□□□□ -1.33
SDCBP-205ENST00000447267 C5orf42Q9H799 3197 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 CLRN2A0PK11 232 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 TRIM43BA6NCK2 446 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 DDX3YO15523 660 aaKnown RBP6.73□□□□□ -1.33
SDCBP-205ENST00000447267 PDGFAP04085 211 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 CYP2C8P10632 490 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 RTP1P59025 263 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 DNM1Q05193 864 aaKnown RBP6.73□□□□□ -1.33
SDCBP-205ENST00000447267 VGLL4Q14135 290 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 SLC10A5Q5PT55 438 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 HGSNATQ68CP4 663 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 PDE12Q6L8Q7 609 aaKnown RBP6.73□□□□□ -1.33
SDCBP-205ENST00000447267 FOXD4L4Q8WXT5 416 aaPredicted RBP6.73□□□□□ -1.33
SDCBP-205ENST00000447267 ATOH1Q92858 354 aaPredicted RBP6.73□□□□□ -1.33
SDCBP-205ENST00000447267 ZNF428Q96B54 188 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 TRIM43Q96BQ3 446 aaPredicted RBP6.73□□□□□ -1.33
SDCBP-205ENST00000447267 FMNL2Q96PY5 1086 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 RBSNQ9H1K0 784 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 ZFP64Q9NPA5 681 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 SALL4Q9UJQ4 1053 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 FNDC3AQ9Y2H6 1198 aaKnown RBP6.73□□□□□ -1.33
SDCBP-205ENST00000447267 ZNF318Q5VUA4 2279 aa6.73□□□□□ -1.33
SDCBP-205ENST00000447267 FASNP49327 2511 aaKnown RBP6.72□□□□□ -1.33
SDCBP-205ENST00000447267 RFXAPO00287 272 aa6.72□□□□□ -1.33
SDCBP-205ENST00000447267 TNPO2O14787 897 aaKnown RBP6.72□□□□□ -1.33
SDCBP-205ENST00000447267 HYAL3O43820 417 aaPredicted RBP6.72□□□□□ -1.33
SDCBP-205ENST00000447267 CDC27P30260 824 aa6.72□□□□□ -1.33
SDCBP-205ENST00000447267 EIF1AXP47813 144 aaKnown RBP6.72□□□□□ -1.33
SDCBP-205ENST00000447267 KRT40Q6A162 431 aa6.72□□□□□ -1.33
SDCBP-205ENST00000447267 TTLL7Q6ZT98 887 aa6.72□□□□□ -1.33
SDCBP-205ENST00000447267 CELF1Q92879 486 aaKnown RBP6.72□□□□□ -1.33
SDCBP-205ENST00000447267 RMDN1Q96DB5 314 aa6.72□□□□□ -1.33
SDCBP-205ENST00000447267 ZBED3Q96IU2 234 aaPredicted RBP6.72□□□□□ -1.33
SDCBP-205ENST00000447267 MFSD14AQ96MC6 490 aa6.72□□□□□ -1.33
SDCBP-205ENST00000447267 ADAM19Q9H013 955 aa6.72□□□□□ -1.33
SDCBP-205ENST00000447267 SRA1Q9HD15 236 aaKnown RBP6.72□□□□□ -1.33
SDCBP-205ENST00000447267 AOX1Q06278 1338 aa6.72□□□□□ -1.33
SDCBP-205ENST00000447267 SETXQ7Z333 2677 aaKnown RBP6.72□□□□□ -1.33
SDCBP-205ENST00000447267 ROCK2O75116 1388 aaKnown RBP6.71□□□□□ -1.33
SDCBP-205ENST00000447267 ATRNL1Q5VV63 1379 aa6.71□□□□□ -1.33
SDCBP-205ENST00000447267 DDX60LQ5H9U9 1706 aaKnown RBP6.71□□□□□ -1.34
SDCBP-205ENST00000447267 GPR179Q6PRD1 2367 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 DCXO43602 365 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 HMGCRP04035 888 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 SNAPC2Q13487 334 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 LRP8Q14114 963 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 XKR5Q6UX68 686 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 KIAA1211Q6ZU35 1233 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 ZNF438Q7Z4V0 828 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 MAP4K3Q8IVH8 894 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 ZNF34Q8IZ26 560 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 ARMC10Q8N2F6 343 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 HERVK_113Q902F9 699 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 NKX2-4Q9H2Z4 354 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 ZCCHC17Q9NP64 241 aaKnown RBP6.71□□□□□ -1.34
SDCBP-205ENST00000447267 CHD6Q8TD26 2715 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 DCHS1Q96JQ0 3298 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 NCOR2Q9Y618 2525 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 XIRP2A4UGR9 3374 aa6.71□□□□□ -1.34
SDCBP-205ENST00000447267 SCN9AQ15858 1988 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 FSCN2O14926 492 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 SMNDC1O75940 238 aaKnown RBP eCLIP6.7□□□□□ -1.34
SDCBP-205ENST00000447267 UFL1O94874 794 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 NPR3P17342 541 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 RASA3Q14644 834 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 MTHFSDQ2M296 383 aaKnown RBP6.7□□□□□ -1.34
SDCBP-205ENST00000447267 DACT2Q5SW24 774 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 NCAPG2Q86XI2 1143 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 LURAP1LQ8IV03 231 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 KIAA0825Q8IV33 1275 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 FAM178BQ8IXR5 827 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.7□□□□□ -1.34
SDCBP-205ENST00000447267 UBASH3BQ8TF42 649 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 ZKSCAN4Q969J2 545 aaPredicted RBP6.7□□□□□ -1.34
SDCBP-205ENST00000447267 KLHDC7BQ96G42 594 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 KRTAP9-2Q9BYQ4 174 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms