RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 NFE2L3Q9Y4A8 694 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 MROH7-TTC4A0A0A0MT08 1334 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 BTBD18B2RXH4 712 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 TLR3O15455 904 aaKnown RBP7.81□□□□□ -1.16
RAB5B-201ENST00000360299 ATN1P54259 1190 aaPredicted RBP7.81□□□□□ -1.16
RAB5B-201ENST00000360299 SNAP25P60880 206 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 SEPT2Q15019 361 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 HSP90AA4PQ58FG1 418 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 TMEM179Q6ZVK1 233 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 TMTC1Q8IUR5 882 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 CDAN1Q8IWY9 1227 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 RBM46Q8TBY0 533 aaKnown RBP7.81□□□□□ -1.16
RAB5B-201ENST00000360299 CCDC51Q96ER9 411 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 RNF208Q9H0X6 261 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 TAF1DQ9H5J8 278 aaPredicted RBP7.81□□□□□ -1.16
RAB5B-201ENST00000360299 TMEM63CQ9P1W3 806 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 PUF60Q9UHX1 559 aaKnown RBP7.81□□□□□ -1.16
RAB5B-201ENST00000360299 RCOR1Q9UKL0 485 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 GSTTP1A0A1W2PQM5 241 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 PRPF3O43395 683 aaKnown RBP7.8□□□□□ -1.16
RAB5B-201ENST00000360299 PTGS1P23219 599 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 MCAMP43121 646 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 CTCFP49711 727 aaPredicted RBP7.8□□□□□ -1.16
RAB5B-201ENST00000360299 TSGA10IPQ3SY00 556 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 ZNF280CQ8ND82 737 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 PSMD1Q99460 953 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 PLIN2Q99541 437 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 RPAP3Q9H6T3 665 aaPredicted RBP7.8□□□□□ -1.16
RAB5B-201ENST00000360299 PCDHA12Q9UN75 941 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 LRRC37A3O60309 1634 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 CYP2D7A0A087X1C5 515 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 PRKAB2O43741 272 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 MYL1P05976 194 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 FOXO4P98177 505 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 IFFO1Q0D2I5 559 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 SKIDA1Q1XH10 827 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 NCAPH2Q6IBW4 605 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 LCORLQ8N3X6 602 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 STAG1Q8WVM7 1258 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 RAVER2Q9HCJ3 691 aaKnown RBP7.8□□□□□ -1.16
RAB5B-201ENST00000360299 CTNND2Q9UQB3 1225 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 SUGT1Q9Y2Z0 365 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 SLIT2O94813 1529 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 H0YCG3 227 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 NR1I2O75469 434 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 KIF23Q02241 960 aaPredicted RBP7.8□□□□□ -1.16
RAB5B-201ENST00000360299 NBPF12Q5TAG4 269 aaPredicted RBP7.8□□□□□ -1.16
RAB5B-201ENST00000360299 CYP26C1Q6V0L0 522 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 OTUD6AQ7L8S5 288 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 SLF1Q9BQI6 1058 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 PIH1D3Q9NQM4 214 aaKnown RBP7.8□□□□□ -1.16
RAB5B-201ENST00000360299 DAGLAQ9Y4D2 1042 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 ARHGAP6O43182 974 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 GTPBP6O43824 516 aaPredicted RBP7.8□□□□□ -1.16
RAB5B-201ENST00000360299 TBC1D8O95759 1140 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 HLTFQ14527 1009 aaKnown RBP eCLIP7.8□□□□□ -1.16
RAB5B-201ENST00000360299 BBXQ8WY36 941 aaPredicted RBP7.8□□□□□ -1.16
RAB5B-201ENST00000360299 CTNNBL1Q8WYA6 563 aaPredicted RBP7.8□□□□□ -1.16
RAB5B-201ENST00000360299 KIFAP3Q92845 792 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 ZNF512BQ96KM6 892 aaPredicted RBP7.8□□□□□ -1.16
RAB5B-201ENST00000360299 FNBP1Q96RU3 617 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 PCDHA7Q9UN72 937 aa7.8□□□□□ -1.16
RAB5B-201ENST00000360299 hCG_1642624A0A1W2PR95 340 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 PALM3A6NDB9 673 aaPredicted RBP7.79□□□□□ -1.16
RAB5B-201ENST00000360299 STX10O60499 249 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 PRPF4BQ13523 1007 aaKnown RBP7.79□□□□□ -1.16
RAB5B-201ENST00000360299 WDR44Q5JSH3 913 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 KRBA2Q6ZNG9 492 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 ERO1BQ86YB8 467 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 GPRC5AQ8NFJ5 357 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 GOLGA5Q8TBA6 731 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 TSPYL1Q9H0U9 437 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 SUGCTQ9HAC7 445 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 ZSWIM5Q9P217 1185 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 RASAL2Q9UJF2 1139 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 FZD1Q9UP38 647 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 UTYO14607 1347 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 ONECUT3O60422 494 aaPredicted RBP7.79□□□□□ -1.16
RAB5B-201ENST00000360299 EZRP15311 586 aaKnown RBP7.79□□□□□ -1.16
RAB5B-201ENST00000360299 MAEAQ7L5Y9 396 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 ZNF784Q8NCA9 323 aaPredicted RBP7.79□□□□□ -1.16
RAB5B-201ENST00000360299 PRMT6Q96LA8 375 aaPredicted RBP7.79□□□□□ -1.16
RAB5B-201ENST00000360299 ZNF830Q96NB3 372 aaPredicted RBP7.79□□□□□ -1.16
RAB5B-201ENST00000360299 GSDMAQ96QA5 445 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 SERTAD1Q9UHV2 236 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 PCDHA4Q9UN74 947 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 GAS7O60861 476 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 C6orf222P0C671 652 aaPredicted RBP7.79□□□□□ -1.16
RAB5B-201ENST00000360299 KCNJ6P48051 423 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 FAM193AP78312 1265 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 STRN3Q13033 797 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 HACE1Q8IYU2 909 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 SYNCQ9H7C4 482 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 ARFGAP3Q9NP61 516 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 SERPINA10Q9UK55 444 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.79□□□□□ -1.16
RAB5B-201ENST00000360299 COL14A1Q05707 1796 aaKnown RBP7.79□□□□□ -1.16
RAB5B-201ENST00000360299 CDK8P49336 464 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 CDC42EP5Q6NZY7 148 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 FAM151AQ8WW52 585 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms