RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 HDAC1Q13547 482 aaPredicted RBP28.7■■■□□ 2.18
CDKN3-202ENST00000335183 DUSP28Q4G0W2 176 aa28.7■■■□□ 2.18
CDKN3-202ENST00000335183 SEZ6LQ9BYH1 1024 aa28.7■■■□□ 2.18
CDKN3-202ENST00000335183 MTIF3Q9H2K0 278 aaKnown RBP28.7■■■□□ 2.18
CDKN3-202ENST00000335183 FGBP02675 491 aa28.69■■■□□ 2.18
CDKN3-202ENST00000335183 PDHBP11177 359 aa28.69■■■□□ 2.18
CDKN3-202ENST00000335183 SLC30A10Q6XR72 485 aa28.69■■■□□ 2.18
CDKN3-202ENST00000335183 HERVK_113Q902F9 699 aa28.69■■■□□ 2.18
CDKN3-202ENST00000335183 RILPL2Q969X0 211 aa28.69■■■□□ 2.18
CDKN3-202ENST00000335183 GAS2L1Q99501 681 aaPredicted RBP28.69■■■□□ 2.18
CDKN3-202ENST00000335183 NOC4LQ9BVI4 516 aaKnown RBP28.69■■■□□ 2.18
CDKN3-202ENST00000335183 WDR11Q9BZH6 1224 aa28.69■■■□□ 2.18
CDKN3-202ENST00000335183 CXXC1Q9P0U4 656 aaPredicted RBP28.69■■■□□ 2.18
CDKN3-202ENST00000335183 ZMYM6O95789 1325 aa28.69■■■□□ 2.18
CDKN3-202ENST00000335183 CCDC171Q6TFL3 1326 aa28.69■■■□□ 2.18
CDKN3-202ENST00000335183 MFSD6Q6ZSS7 791 aa28.68■■■□□ 2.18
CDKN3-202ENST00000335183 OTOP2Q7RTS6 562 aa28.68■■■□□ 2.18
CDKN3-202ENST00000335183 USP38Q8NB14 1042 aa28.68■■■□□ 2.18
CDKN3-202ENST00000335183 LNPKQ9C0E8 428 aa28.68■■■□□ 2.18
CDKN3-202ENST00000335183 MSRAQ9UJ68 235 aa28.68■■■□□ 2.18
CDKN3-202ENST00000335183 AKNAD1Q5T1N1 836 aa28.67■■■□□ 2.18
CDKN3-202ENST00000335183 RNF207Q6ZRF8 634 aa28.67■■■□□ 2.18
CDKN3-202ENST00000335183 PRDM12Q9H4Q4 367 aa28.67■■■□□ 2.18
CDKN3-202ENST00000335183 LOC102724159A0A0B4J2E5 919 aa28.66■■■□□ 2.18
CDKN3-202ENST00000335183 MYL3P08590 195 aa28.66■■■□□ 2.18
CDKN3-202ENST00000335183 ZNF543Q08ER8 600 aa28.66■■■□□ 2.18
CDKN3-202ENST00000335183 PWP2Q15269 919 aaKnown RBP28.66■■■□□ 2.18
CDKN3-202ENST00000335183 RAB30Q15771 203 aa28.66■■■□□ 2.18
CDKN3-202ENST00000335183 OR6J1Q8NGC5 347 aa28.66■■■□□ 2.18
CDKN3-202ENST00000335183 CLEC4DQ8WXI8 215 aa28.66■■■□□ 2.18
CDKN3-202ENST00000335183 PPM1EQ8WY54 764 aa28.66■■■□□ 2.18
CDKN3-202ENST00000335183 WNT8AQ9H1J5 351 aa28.66■■■□□ 2.18
CDKN3-202ENST00000335183 POLR3EQ9NVU0 708 aa28.66■■■□□ 2.18
CDKN3-202ENST00000335183 LAMA4Q16363 1823 aa28.65■■■□□ 2.18
CDKN3-202ENST00000335183 TICAM2Q86XR7 235 aa28.65■■■□□ 2.18
CDKN3-202ENST00000335183 TBC1D10CQ8IV04 446 aa28.65■■■□□ 2.18
CDKN3-202ENST00000335183 TTC14Q96N46 770 aa28.65■■■□□ 2.18
CDKN3-202ENST00000335183 ALDH8A1Q9H2A2 487 aaPredicted RBP28.65■■■□□ 2.18
CDKN3-202ENST00000335183 PNMA2Q9UL42 364 aa28.65■■■□□ 2.18
CDKN3-202ENST00000335183 SCN5AQ14524 2016 aa28.65■■■□□ 2.18
CDKN3-202ENST00000335183 MYH6P13533 1939 aa28.65■■■□□ 2.18
CDKN3-202ENST00000335183 CPT1AP50416 773 aa28.64■■■□□ 2.18
CDKN3-202ENST00000335183 PDE4DQ08499 809 aa28.64■■■□□ 2.18
CDKN3-202ENST00000335183 SCLYQ96I15 445 aa28.64■■■□□ 2.18
CDKN3-202ENST00000335183 MPHOSPH6Q99547 160 aaKnown RBP28.64■■■□□ 2.18
CDKN3-202ENST00000335183 ZKSCAN3Q9BRR0 538 aa28.64■■■□□ 2.18
CDKN3-202ENST00000335183 NKX2-4Q9H2Z4 354 aa28.64■■■□□ 2.18
CDKN3-202ENST00000335183 GPHNQ9NQX3 736 aaPredicted RBP28.64■■■□□ 2.18
CDKN3-202ENST00000335183 PRUNE2Q8WUY3 3088 aa28.63■■■□□ 2.17
CDKN3-202ENST00000335183 RBM47A0AV96 593 aaKnown RBP28.63■■■□□ 2.17
CDKN3-202ENST00000335183 PCP11498 1178 aaKnown RBP28.63■■■□□ 2.17
CDKN3-202ENST00000335183 RPS6P62753 249 aaKnown RBP28.63■■■□□ 2.17
CDKN3-202ENST00000335183 PURAQ00577 322 aaKnown RBP28.63■■■□□ 2.17
CDKN3-202ENST00000335183 RPUSD2Q8IZ73 545 aaKnown RBP28.63■■■□□ 2.17
CDKN3-202ENST00000335183 SYMPKQ92797 1274 aaKnown RBP28.63■■■□□ 2.17
CDKN3-202ENST00000335183 RNF41Q9H4P4 317 aaPredicted RBP28.63■■■□□ 2.17
CDKN3-202ENST00000335183 TRMT13Q9NUP7 481 aaKnown RBP28.63■■■□□ 2.17
CDKN3-202ENST00000335183 GOLGA8HP0CJ92 632 aa28.62■■■□□ 2.17
CDKN3-202ENST00000335183 MFAP1P55081 439 aaKnown RBP28.62■■■□□ 2.17
CDKN3-202ENST00000335183 PPP2R5BQ15173 497 aa28.62■■■□□ 2.17
CDKN3-202ENST00000335183 USH1GQ495M9 461 aa28.62■■■□□ 2.17
CDKN3-202ENST00000335183 B4GALNT3Q6L9W6 998 aa28.62■■■□□ 2.17
CDKN3-202ENST00000335183 ESR2Q92731 530 aa28.62■■■□□ 2.17
CDKN3-202ENST00000335183 SCN10AQ9Y5Y9 1956 aa28.62■■■□□ 2.17
CDKN3-202ENST00000335183 TNKSO95271 1327 aa28.62■■■□□ 2.17
CDKN3-202ENST00000335183 NEDD4P46934 1319 aa28.62■■■□□ 2.17
CDKN3-202ENST00000335183 WDR19Q8NEZ3 1342 aa28.62■■■□□ 2.17
CDKN3-202ENST00000335183 ZBBXA8MT70 800 aa28.61■■■□□ 2.17
CDKN3-202ENST00000335183 SUPT20HL2P0C7V6 817 aa28.61■■■□□ 2.17
CDKN3-202ENST00000335183 SNHG28P0DPA3 235 aa28.61■■■□□ 2.17
CDKN3-202ENST00000335183 CYP2C9P11712 490 aa28.61■■■□□ 2.17
CDKN3-202ENST00000335183 BRDTQ58F21 947 aaPredicted RBP28.61■■■□□ 2.17
CDKN3-202ENST00000335183 FAM47CQ5HY64 1035 aa28.61■■■□□ 2.17
CDKN3-202ENST00000335183 MTG1Q9BT17 334 aaPredicted RBP28.61■■■□□ 2.17
CDKN3-202ENST00000335183 SLC28A3Q9HAS3 691 aa28.61■■■□□ 2.17
CDKN3-202ENST00000335183 PRDM6Q9NQX0 595 aa28.61■■■□□ 2.17
CDKN3-202ENST00000335183 SDSP20132 328 aa28.6■■■□□ 2.17
CDKN3-202ENST00000335183 GPATCH4Q5T3I0 446 aaKnown RBP28.6■■■□□ 2.17
CDKN3-202ENST00000335183 COPS5Q92905 334 aa28.6■■■□□ 2.17
CDKN3-202ENST00000335183 UBA5Q9GZZ9 404 aa28.6■■■□□ 2.17
CDKN3-202ENST00000335183 CPVLQ9H3G5 476 aa28.6■■■□□ 2.17
CDKN3-202ENST00000335183 YBX2Q9Y2T7 364 aaKnown RBP28.6■■■□□ 2.17
CDKN3-202ENST00000335183 SLC4A7Q9Y6M7 1214 aa28.6■■■□□ 2.17
CDKN3-202ENST00000335183 RAD50Q92878 1312 aa28.6■■■□□ 2.17
CDKN3-202ENST00000335183 ZNF213O14771 459 aa28.59■■■□□ 2.17
CDKN3-202ENST00000335183 NKRFO15226 690 aaKnown RBP eCLIP28.59■■■□□ 2.17
CDKN3-202ENST00000335183 IGFBP4P22692 258 aa28.59■■■□□ 2.17
CDKN3-202ENST00000335183 RABGGTBP53611 331 aa28.59■■■□□ 2.17
CDKN3-202ENST00000335183 DNERQ8NFT8 737 aa28.59■■■□□ 2.17
CDKN3-202ENST00000335183 SCFD2Q8WU76 684 aa28.59■■■□□ 2.17
CDKN3-202ENST00000335183 PPP1R13LQ8WUF5 828 aa28.59■■■□□ 2.17
CDKN3-202ENST00000335183 B4DLN1 442 aa28.58■■■□□ 2.17
CDKN3-202ENST00000335183 MRPL12P52815 198 aaKnown RBP28.58■■■□□ 2.17
CDKN3-202ENST00000335183 TJAP1Q5JTD0 557 aa28.58■■■□□ 2.17
CDKN3-202ENST00000335183 DEFB128Q7Z7B8 93 aa28.58■■■□□ 2.17
CDKN3-202ENST00000335183 TANC1Q9C0D5 1861 aa28.57■■■□□ 2.16
CDKN3-202ENST00000335183 TXNP10599 105 aaKnown RBP28.57■■■□□ 2.16
CDKN3-202ENST00000335183 EDNRBP24530 442 aa28.57■■■□□ 2.16
CDKN3-202ENST00000335183 ADGRE1Q14246 886 aa28.57■■■□□ 2.16
CDKN3-202ENST00000335183 CCDC85BQ15834 202 aaPredicted RBP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms