RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 PNMA1Q8ND90 353 aa20.33■□□□□ 0.85
TFF3-201ENST00000291525 GUCD1Q96NT3 240 aa20.33■□□□□ 0.85
TFF3-201ENST00000291525 KRT23Q9C075 422 aa20.33■□□□□ 0.85
TFF3-201ENST00000291525 CNNM2Q9H8M5 875 aa20.33■□□□□ 0.85
TFF3-201ENST00000291525 PDGFCQ9NRA1 345 aa20.33■□□□□ 0.85
TFF3-201ENST00000291525 EPHB4P54760 987 aa20.32■□□□□ 0.84
TFF3-201ENST00000291525 PDE4DQ08499 809 aa20.32■□□□□ 0.84
TFF3-201ENST00000291525 ITGA7Q13683 1181 aa20.32■□□□□ 0.84
TFF3-201ENST00000291525 DUSP28Q4G0W2 176 aa20.32■□□□□ 0.84
TFF3-201ENST00000291525 DNERQ8NFT8 737 aa20.32■□□□□ 0.84
TFF3-201ENST00000291525 CLEC4DQ8WXI8 215 aa20.32■□□□□ 0.84
TFF3-201ENST00000291525 MAF1Q9H063 256 aa20.32■□□□□ 0.84
TFF3-201ENST00000291525 COL6A3P12111 3177 aa20.32■□□□□ 0.84
TFF3-201ENST00000291525 RAD50Q92878 1312 aa20.31■□□□□ 0.84
TFF3-201ENST00000291525 B4E1Z4 1266 aa20.31■□□□□ 0.84
TFF3-201ENST00000291525 ASPRV1Q53RT3 343 aa20.31■□□□□ 0.84
TFF3-201ENST00000291525 BRDTQ58F21 947 aaPredicted RBP20.31■□□□□ 0.84
TFF3-201ENST00000291525 SLC30A10Q6XR72 485 aa20.31■□□□□ 0.84
TFF3-201ENST00000291525 SLC43A3Q8NBI5 491 aa20.31■□□□□ 0.84
TFF3-201ENST00000291525 PURBQ96QR8 312 aaKnown RBP20.31■□□□□ 0.84
TFF3-201ENST00000291525 ZSCAN10Q96SZ4 725 aaPredicted RBP20.31■□□□□ 0.84
TFF3-201ENST00000291525 UBAC1Q9BSL1 405 aa20.31■□□□□ 0.84
TFF3-201ENST00000291525 WDR11Q9BZH6 1224 aa20.31■□□□□ 0.84
TFF3-201ENST00000291525 POLR3EQ9NVU0 708 aa20.31■□□□□ 0.84
TFF3-201ENST00000291525 DDX49Q9Y6V7 483 aaKnown RBP20.31■□□□□ 0.84
TFF3-201ENST00000291525 MYH6P13533 1939 aa20.31■□□□□ 0.84
TFF3-201ENST00000291525 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.3■□□□□ 0.84
TFF3-201ENST00000291525 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.3■□□□□ 0.84
TFF3-201ENST00000291525 NKRFO15226 690 aaKnown RBP eCLIP20.3■□□□□ 0.84
TFF3-201ENST00000291525 CD4P01730 458 aa20.3■□□□□ 0.84
TFF3-201ENST00000291525 GOLGA8HP0CJ92 632 aa20.3■□□□□ 0.84
TFF3-201ENST00000291525 CPT1AP50416 773 aa20.3■□□□□ 0.84
TFF3-201ENST00000291525 RPS6P62753 249 aaKnown RBP20.3■□□□□ 0.84
TFF3-201ENST00000291525 USH1GQ495M9 461 aa20.3■□□□□ 0.84
TFF3-201ENST00000291525 PSRC1Q6PGN9 363 aaPredicted RBP20.3■□□□□ 0.84
TFF3-201ENST00000291525 RGS22Q8NE09 1264 aa20.3■□□□□ 0.84
TFF3-201ENST00000291525 ANKS1AQ92625 1134 aa20.3■□□□□ 0.84
TFF3-201ENST00000291525 PPP1R12CQ9BZL4 782 aa20.3■□□□□ 0.84
TFF3-201ENST00000291525 SEMA6BQ9H3T3 888 aa20.3■□□□□ 0.84
TFF3-201ENST00000291525 TNKSO95271 1327 aa20.29■□□□□ 0.84
TFF3-201ENST00000291525 ABCB11O95342 1321 aa20.29■□□□□ 0.84
TFF3-201ENST00000291525 RBM47A0AV96 593 aaKnown RBP20.29■□□□□ 0.84
TFF3-201ENST00000291525 PPP2R5BQ15173 497 aa20.29■□□□□ 0.84
TFF3-201ENST00000291525 CDC37Q16543 378 aaPredicted RBP20.29■□□□□ 0.84
TFF3-201ENST00000291525 MTIF3Q9H2K0 278 aaKnown RBP20.29■□□□□ 0.84
TFF3-201ENST00000291525 GPHNQ9NQX3 736 aaPredicted RBP20.29■□□□□ 0.84
TFF3-201ENST00000291525 DLL1O00548 723 aa20.28■□□□□ 0.84
TFF3-201ENST00000291525 PARP1P09874 1014 aaKnown RBP20.28■□□□□ 0.84
TFF3-201ENST00000291525 ENAHQ8N8S7 591 aaPredicted RBP20.28■□□□□ 0.84
TFF3-201ENST00000291525 OR6J1Q8NGC5 347 aa20.28■□□□□ 0.84
TFF3-201ENST00000291525 SCFD2Q8WU76 684 aa20.28■□□□□ 0.84
TFF3-201ENST00000291525 RUFY2Q8WXA3 655 aa20.28■□□□□ 0.84
TFF3-201ENST00000291525 CDX2Q99626 313 aaPredicted RBP20.28■□□□□ 0.84
TFF3-201ENST00000291525 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.28■□□□□ 0.84
TFF3-201ENST00000291525 UBA5Q9GZZ9 404 aa20.28■□□□□ 0.84
TFF3-201ENST00000291525 HIPK3Q9H422 1215 aa20.28■□□□□ 0.84
TFF3-201ENST00000291525 ZSWIM5Q9P217 1185 aa20.28■□□□□ 0.84
TFF3-201ENST00000291525 DHX16O60231 1041 aaKnown RBP20.27■□□□□ 0.84
TFF3-201ENST00000291525 CSF2RAP15509 400 aa20.27■□□□□ 0.84
TFF3-201ENST00000291525 EDNRBP24530 442 aa20.27■□□□□ 0.84
TFF3-201ENST00000291525 IFIT1BQ5T764 474 aaKnown RBP20.27■□□□□ 0.84
TFF3-201ENST00000291525 TTC22Q5TAA0 569 aa20.27■□□□□ 0.84
TFF3-201ENST00000291525 MCF2L2Q86YR7 1114 aa20.27■□□□□ 0.84
TFF3-201ENST00000291525 SUPT16HQ9Y5B9 1047 aaKnown RBP20.27■□□□□ 0.84
TFF3-201ENST00000291525 LAMA2P24043 3122 aaKnown RBP20.27■□□□□ 0.83
TFF3-201ENST00000291525 CYP2C18P33260 490 aa20.26■□□□□ 0.83
TFF3-201ENST00000291525 TRDNQ13061 729 aa20.26■□□□□ 0.83
TFF3-201ENST00000291525 TMEM240Q5SV17 173 aa20.26■□□□□ 0.83
TFF3-201ENST00000291525 ADGRF4Q8IZF3 695 aa20.26■□□□□ 0.83
TFF3-201ENST00000291525 TTYH1Q9H313 450 aaPredicted RBP20.26■□□□□ 0.83
TFF3-201ENST00000291525 IL23AQ9NPF7 189 aa20.26■□□□□ 0.83
TFF3-201ENST00000291525 KPNA6O60684 536 aa20.25■□□□□ 0.83
TFF3-201ENST00000291525 MYL3P08590 195 aa20.25■□□□□ 0.83
TFF3-201ENST00000291525 SUPT20HL2P0C7V6 817 aa20.25■□□□□ 0.83
TFF3-201ENST00000291525 PTGS1P23219 599 aa20.25■□□□□ 0.83
TFF3-201ENST00000291525 DNAJB2P25686 324 aa20.25■□□□□ 0.83
TFF3-201ENST00000291525 PSMC6P62333 389 aa20.25■□□□□ 0.83
TFF3-201ENST00000291525 TTLL4Q14679 1199 aa20.25■□□□□ 0.83
TFF3-201ENST00000291525 TMEM63BQ5T3F8 832 aa20.25■□□□□ 0.83
TFF3-201ENST00000291525 FBXO11Q86XK2 927 aa20.25■□□□□ 0.83
TFF3-201ENST00000291525 MTG1Q9BT17 334 aaPredicted RBP20.25■□□□□ 0.83
TFF3-201ENST00000291525 CPVLQ9H3G5 476 aa20.25■□□□□ 0.83
TFF3-201ENST00000291525 MRPL11Q9Y3B7 192 aaKnown RBP20.25■□□□□ 0.83
TFF3-201ENST00000291525 GRIN2DO15399 1336 aa20.25■□□□□ 0.83
TFF3-201ENST00000291525 B4GALT4O60513 344 aa20.24■□□□□ 0.83
TFF3-201ENST00000291525 FOSL2P15408 326 aa20.24■□□□□ 0.83
TFF3-201ENST00000291525 PURAQ00577 322 aaKnown RBP20.24■□□□□ 0.83
TFF3-201ENST00000291525 ZNF365Q70YC5 407 aa20.24■□□□□ 0.83
TFF3-201ENST00000291525 NSUN6Q8TEA1 469 aaKnown RBP20.24■□□□□ 0.83
TFF3-201ENST00000291525 TRPV6Q9H1D0 765 aa20.24■□□□□ 0.83
TFF3-201ENST00000291525 ALDH8A1Q9H2A2 487 aaPredicted RBP20.24■□□□□ 0.83
TFF3-201ENST00000291525 ACRP10323 421 aa20.23■□□□□ 0.83
TFF3-201ENST00000291525 TXNP10599 105 aaKnown RBP20.23■□□□□ 0.83
TFF3-201ENST00000291525 QRICH1Q2TAL8 776 aa20.23■□□□□ 0.83
TFF3-201ENST00000291525 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.23■□□□□ 0.83
TFF3-201ENST00000291525 RPUSD2Q8IZ73 545 aaKnown RBP20.23■□□□□ 0.83
TFF3-201ENST00000291525 MAFAQ8NHW3 353 aaPredicted RBP20.23■□□□□ 0.83
TFF3-201ENST00000291525 MYLIPQ8WY64 445 aa20.23■□□□□ 0.83
TFF3-201ENST00000291525 TIFAQ96CG3 184 aa20.23■□□□□ 0.83
TFF3-201ENST00000291525 NOC4LQ9BVI4 516 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms