RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 NELFCDQ8IXH7 590 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 MRRFQ96E11 262 aaKnown RBP17.94■□□□□ 0.46
GPC1-201ENST00000264039 AGXT2Q9BYV1 514 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 LY9Q9HBG7 655 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 STX8Q9UNK0 236 aa17.94■□□□□ 0.46
GPC1-201ENST00000264039 USP6P35125 1406 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 ACCSLQ4AC99 568 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 TBC1D5Q92609 795 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 SWAP70Q9UH65 585 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 JAG2Q9Y219 1238 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 GSTTP1A0A1W2PQM5 241 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 PLEKHA8P1O95397 391 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 MMP14P50281 582 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 KLHL30Q0D2K2 578 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 KCNB1Q14721 858 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 LRRC14Q15048 493 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 CCDC155Q8N6L0 562 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 KCNH5Q8NCM2 988 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 TSG101Q99816 390 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 NSRP1Q9H0G5 558 aaKnown RBP17.93■□□□□ 0.46
GPC1-201ENST00000264039 CYP2D7A0A087X1C5 515 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 ANO9A1A5B4 782 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 MDM2Q00987 491 aaPredicted RBP17.93■□□□□ 0.46
GPC1-201ENST00000264039 PLBD2Q8NHP8 589 aa17.93■□□□□ 0.46
GPC1-201ENST00000264039 INTS9Q9NV88 658 aaKnown RBP17.93■□□□□ 0.46
GPC1-201ENST00000264039 AATFQ9NY61 560 aaKnown RBP eCLIP17.93■□□□□ 0.46
GPC1-201ENST00000264039 G3BP2Q9UN86 482 aaKnown RBP17.93■□□□□ 0.46
GPC1-201ENST00000264039 RGS16O15492 202 aaPredicted RBP17.92■□□□□ 0.46
GPC1-201ENST00000264039 EVI5O60447 810 aa17.92■□□□□ 0.46
GPC1-201ENST00000264039 SLC1A4P43007 532 aa17.92■□□□□ 0.46
GPC1-201ENST00000264039 FAM47AQ5JRC9 791 aa17.92■□□□□ 0.46
GPC1-201ENST00000264039 PAPD7Q5XG87 772 aaKnown RBP17.92■□□□□ 0.46
GPC1-201ENST00000264039 DNAAF5Q86Y56 855 aa17.92■□□□□ 0.46
GPC1-201ENST00000264039 SYNE4Q8N205 404 aa17.92■□□□□ 0.46
GPC1-201ENST00000264039 SCTRP47872 440 aa17.92■□□□□ 0.46
GPC1-201ENST00000264039 CCDC38Q502W7 563 aa17.92■□□□□ 0.46
GPC1-201ENST00000264039 VSIG1Q86XK7 387 aa17.92■□□□□ 0.46
GPC1-201ENST00000264039 AENQ8WTP8 325 aaKnown RBP17.92■□□□□ 0.46
GPC1-201ENST00000264039 LIMA1Q9UHB6 759 aaKnown RBP17.92■□□□□ 0.46
GPC1-201ENST00000264039 LRRC53A6NM62 1247 aa17.92■□□□□ 0.46
GPC1-201ENST00000264039 GCP02774 474 aa17.92■□□□□ 0.46
GPC1-201ENST00000264039 CCNHP51946 323 aaPredicted RBP17.92■□□□□ 0.46
GPC1-201ENST00000264039 PREPLQ4J6C6 727 aaPredicted RBP17.92■□□□□ 0.46
GPC1-201ENST00000264039 ATG9AQ7Z3C6 839 aa17.92■□□□□ 0.46
GPC1-201ENST00000264039 CALML4Q96GE6 196 aa17.92■□□□□ 0.46
GPC1-201ENST00000264039 FBXL5Q9UKA1 691 aa17.92■□□□□ 0.46
GPC1-201ENST00000264039 FSBPO95073 299 aa17.91■□□□□ 0.46
GPC1-201ENST00000264039 FGFR1OPO95684 399 aaKnown RBP17.91■□□□□ 0.46
GPC1-201ENST00000264039 PSMD2Q13200 908 aa17.91■□□□□ 0.46
GPC1-201ENST00000264039 CRYMQ14894 314 aa17.91■□□□□ 0.46
GPC1-201ENST00000264039 INF2Q27J81 1249 aa17.91■□□□□ 0.46
GPC1-201ENST00000264039 ARMC3Q5W041 872 aa17.91■□□□□ 0.46
GPC1-201ENST00000264039 MKRN4PQ13434 485 aaPredicted RBP17.91■□□□□ 0.46
GPC1-201ENST00000264039 CDKAL1Q5VV42 579 aa17.91■□□□□ 0.46
GPC1-201ENST00000264039 HAUS3Q68CZ6 603 aa17.91■□□□□ 0.46
GPC1-201ENST00000264039 FAM43BQ6ZT52 329 aaPredicted RBP17.91■□□□□ 0.46
GPC1-201ENST00000264039 PIH1D3Q9NQM4 214 aaKnown RBP17.91■□□□□ 0.46
GPC1-201ENST00000264039 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.91■□□□□ 0.46
GPC1-201ENST00000264039 CAPN11Q9UMQ6 739 aa17.91■□□□□ 0.46
GPC1-201ENST00000264039 UTP11Q9Y3A2 253 aaKnown RBP17.91■□□□□ 0.46
GPC1-201ENST00000264039 USP32Q8NFA0 1604 aa17.91■□□□□ 0.46
GPC1-201ENST00000264039 ANP32DO95626 131 aa17.9■□□□□ 0.46
GPC1-201ENST00000264039 MMEP08473 750 aa17.9■□□□□ 0.46
GPC1-201ENST00000264039 MCAMP43121 646 aa17.9■□□□□ 0.46
GPC1-201ENST00000264039 PLTPP55058 493 aa17.9■□□□□ 0.46
GPC1-201ENST00000264039 SPDYE1Q8NFV5 336 aaPredicted RBP17.9■□□□□ 0.46
GPC1-201ENST00000264039 FBF1Q8TES7 1133 aa17.9■□□□□ 0.46
GPC1-201ENST00000264039 CTNNBL1Q8WYA6 563 aaPredicted RBP17.9■□□□□ 0.46
GPC1-201ENST00000264039 ZNF233A6NK53 670 aa17.9■□□□□ 0.46
GPC1-201ENST00000264039 HIP1RO75146 1068 aa17.9■□□□□ 0.46
GPC1-201ENST00000264039 EEF1GP26641 437 aaKnown RBP17.9■□□□□ 0.46
GPC1-201ENST00000264039 TXKP42681 527 aa17.9■□□□□ 0.46
GPC1-201ENST00000264039 RFX5P48382 616 aaPredicted RBP17.9■□□□□ 0.46
GPC1-201ENST00000264039 PMS1P54277 932 aaKnown RBP17.9■□□□□ 0.46
GPC1-201ENST00000264039 PEX26Q7Z412 305 aa17.9■□□□□ 0.46
GPC1-201ENST00000264039 IFNL2Q8IZJ0 200 aa17.9■□□□□ 0.46
GPC1-201ENST00000264039 PYM1Q9BRP8 204 aaKnown RBP17.9■□□□□ 0.46
GPC1-201ENST00000264039 NOP53Q9NZM5 478 aaKnown RBP17.9■□□□□ 0.46
GPC1-201ENST00000264039 ITGA6P23229 1130 aa17.9■□□□□ 0.46
GPC1-201ENST00000264039 SARSP49591 514 aaKnown RBP17.9■□□□□ 0.46
GPC1-201ENST00000264039 PPP2R2AP63151 447 aa17.9■□□□□ 0.46
GPC1-201ENST00000264039 SEMA3EO15041 775 aa17.89■□□□□ 0.46
GPC1-201ENST00000264039 DAPK3O43293 454 aa17.89■□□□□ 0.46
GPC1-201ENST00000264039 ABCB4P21439 1286 aa17.89■□□□□ 0.46
GPC1-201ENST00000264039 ERFP50548 548 aa17.89■□□□□ 0.46
GPC1-201ENST00000264039 EARS2Q5JPH6 523 aaKnown RBP17.89■□□□□ 0.46
GPC1-201ENST00000264039 AMPD3Q01432 767 aa17.89■□□□□ 0.45
GPC1-201ENST00000264039 SFMBT2Q5VUG0 894 aa17.89■□□□□ 0.45
GPC1-201ENST00000264039 CREG2Q8IUH2 290 aa17.89■□□□□ 0.45
GPC1-201ENST00000264039 AMACRQ9UHK6 382 aa17.89■□□□□ 0.45
GPC1-201ENST00000264039 PNMA2Q9UL42 364 aa17.89■□□□□ 0.45
GPC1-201ENST00000264039 GRIN2DO15399 1336 aa17.89■□□□□ 0.45
GPC1-201ENST00000264039 IRX1P78414 480 aaPredicted RBP17.89■□□□□ 0.45
GPC1-201ENST00000264039 CCDC26Q8TAB7 109 aa17.89■□□□□ 0.45
GPC1-201ENST00000264039 CABLES1Q8TDN4 633 aa17.89■□□□□ 0.45
GPC1-201ENST00000264039 STAG1Q8WVM7 1258 aa17.89■□□□□ 0.45
GPC1-201ENST00000264039 RAD51CO43502 376 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 LGR5O75473 907 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 IGDCC4Q8TDY8 1250 aa17.88■□□□□ 0.45
GPC1-201ENST00000264039 CARD10Q9BWT7 1032 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms