RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SLCO6A1Q86UG4 719 aa6.52□□□□□ -1.37
CCDC54-201ENST00000261058 AGBL5Q8NDL9 886 aa6.52□□□□□ -1.37
CCDC54-201ENST00000261058 SLC7A14Q8TBB6 771 aa6.52□□□□□ -1.37
CCDC54-201ENST00000261058 CLUHP3Q96NS8 147 aa6.52□□□□□ -1.37
CCDC54-201ENST00000261058 ZFYVE21Q9BQ24 234 aa6.52□□□□□ -1.37
CCDC54-201ENST00000261058 TRIM39Q9HCM9 518 aa6.52□□□□□ -1.37
CCDC54-201ENST00000261058 GPR27Q9NS67 375 aa6.52□□□□□ -1.37
CCDC54-201ENST00000261058 PCMTD2Q9NV79 361 aa6.52□□□□□ -1.37
CCDC54-201ENST00000261058 ASXL2Q76L83 1435 aa6.52□□□□□ -1.37
CCDC54-201ENST00000261058 NPHP3-ACAD11A0A0J9YXS1 232 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.51□□□□□ -1.37
CCDC54-201ENST00000261058 BLACEA4D250 179 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 NOTOA8MTQ0 251 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 MEFVO15553 781 aaPredicted RBP6.51□□□□□ -1.37
CCDC54-201ENST00000261058 RAPGEF3O95398 923 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 TBC1D8O95759 1140 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 LTBRP36941 435 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 PABPC4Q13310 644 aaKnown RBP eCLIP6.51□□□□□ -1.37
CCDC54-201ENST00000261058 NR0B2Q15466 257 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 INF2Q27J81 1249 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 USP53Q70EK8 1073 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 ANKS4BQ8N8V4 417 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 NLGN2Q8NFZ4 835 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 NINJ1Q92982 152 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 SLC52A2Q9HAB3 445 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 PRDM7Q9NQW5 492 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 MBNL3Q9NUK0 354 aaKnown RBP6.51□□□□□ -1.37
CCDC54-201ENST00000261058 SLAMF8Q9P0V8 285 aa6.51□□□□□ -1.37
CCDC54-201ENST00000261058 A0A1W2PQ45 241 aaPredicted RBP6.5□□□□□ -1.37
CCDC54-201ENST00000261058 A0A1W2PQY0 241 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 EFCAB14O75071 495 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 GYS2P54840 703 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 HLA-DQA1Q5Y7H0 255 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 RCBTB1Q8NDN9 531 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 PDZD8Q8NEN9 1154 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 DIO2Q92813 273 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 CCDC120Q96HB5 630 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 TMX1Q9H3N1 280 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 SFMBT1Q9UHJ3 866 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 C7orf72A4D263 438 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 CLSTN1O94985 981 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 HPXP02790 462 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 RNASE1P07998 156 aaKnown RBP6.5□□□□□ -1.37
CCDC54-201ENST00000261058 GDNFP39905 211 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 CORO7P57737 925 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 CHRNEQ04844 493 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 TM4SF20Q53R12 229 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 KCNT2Q6UVM3 1135 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 Q8N1Y9 231 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 NAT16Q8N8M0 369 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.5□□□□□ -1.37
CCDC54-201ENST00000261058 PHF20Q9BVI0 1012 aa6.5□□□□□ -1.37
CCDC54-201ENST00000261058 INTS7Q9NVH2 962 aaKnown RBP6.5□□□□□ -1.37
CCDC54-201ENST00000261058 AQP7O14520 342 aa6.49□□□□□ -1.37
CCDC54-201ENST00000261058 MSCO60682 206 aa6.49□□□□□ -1.37
CCDC54-201ENST00000261058 EFEMP2O95967 443 aa6.49□□□□□ -1.37
CCDC54-201ENST00000261058 LCP1P13796 627 aa6.49□□□□□ -1.37
CCDC54-201ENST00000261058 GPR85P60893 370 aa6.49□□□□□ -1.37
CCDC54-201ENST00000261058 RBM10P98175 930 aaKnown RBP6.49□□□□□ -1.37
CCDC54-201ENST00000261058 PI4K2BQ8TCG2 481 aa6.49□□□□□ -1.37
CCDC54-201ENST00000261058 SYTL4Q96C24 671 aaPredicted RBP6.49□□□□□ -1.37
CCDC54-201ENST00000261058 ASIC4Q96FT7 647 aa6.49□□□□□ -1.37
CCDC54-201ENST00000261058 SCLYQ96I15 445 aa6.49□□□□□ -1.37
CCDC54-201ENST00000261058 JMJD8Q96S16 334 aa6.49□□□□□ -1.37
CCDC54-201ENST00000261058 CDIP1Q9H305 208 aa6.49□□□□□ -1.37
CCDC54-201ENST00000261058 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCDC54-201ENST00000261058 PRKAB1Q9Y478 270 aa6.49□□□□□ -1.37
CCDC54-201ENST00000261058 TRAF6Q9Y4K3 522 aa6.49□□□□□ -1.37
CCDC54-201ENST00000261058 FITM1A5D6W6 292 aa6.48□□□□□ -1.37
CCDC54-201ENST00000261058 FAM83GA6ND36 823 aa6.48□□□□□ -1.37
CCDC54-201ENST00000261058 WNT9AO14904 365 aa6.48□□□□□ -1.37
CCDC54-201ENST00000261058 NRDCO43847 1150 aa6.48□□□□□ -1.37
CCDC54-201ENST00000261058 USP2O75604 605 aaPredicted RBP6.48□□□□□ -1.37
CCDC54-201ENST00000261058 DNAJC8O75937 253 aaPredicted RBP6.48□□□□□ -1.37
CCDC54-201ENST00000261058 PLCL1Q15111 1095 aa6.48□□□□□ -1.37
CCDC54-201ENST00000261058 ZNF792Q3KQV3 632 aa6.48□□□□□ -1.37
CCDC54-201ENST00000261058 HSF5Q4G112 596 aaPredicted RBP6.48□□□□□ -1.37
CCDC54-201ENST00000261058 LBX2Q6XYB7 198 aa6.48□□□□□ -1.37
CCDC54-201ENST00000261058 BRAPQ7Z569 592 aa6.48□□□□□ -1.37
CCDC54-201ENST00000261058 CPNE8Q86YQ8 564 aa6.48□□□□□ -1.37
CCDC54-201ENST00000261058 NIM1KQ8IY84 436 aa6.48□□□□□ -1.37
CCDC54-201ENST00000261058 DPF3Q92784 378 aa6.48□□□□□ -1.37
CCDC54-201ENST00000261058 MFSD3Q96ES6 412 aa6.48□□□□□ -1.37
CCDC54-201ENST00000261058 ARVCFO00192 962 aa6.47□□□□□ -1.37
CCDC54-201ENST00000261058 VIL1P09327 827 aaKnown RBP6.47□□□□□ -1.37
CCDC54-201ENST00000261058 RTP1P59025 263 aa6.47□□□□□ -1.37
CCDC54-201ENST00000261058 LAPTM5Q13571 262 aa6.47□□□□□ -1.37
CCDC54-201ENST00000261058 CBLL1Q75N03 491 aa6.47□□□□□ -1.37
CCDC54-201ENST00000261058 FGD2Q7Z6J4 655 aa6.47□□□□□ -1.37
CCDC54-201ENST00000261058 SPPL2CQ8IUH8 684 aa6.47□□□□□ -1.37
CCDC54-201ENST00000261058 TP53INP2Q8IXH6 220 aa6.47□□□□□ -1.37
CCDC54-201ENST00000261058 IFNL3Q8IZI9 196 aa6.47□□□□□ -1.37
CCDC54-201ENST00000261058 MAGEC2Q9UBF1 373 aaPredicted RBP6.47□□□□□ -1.37
CCDC54-201ENST00000261058 NDOR1Q9UHB4 597 aa6.47□□□□□ -1.37
CCDC54-201ENST00000261058 FBXL7Q9UJT9 491 aa6.47□□□□□ -1.37
CCDC54-201ENST00000261058 ACSL6Q9UKU0 697 aa6.47□□□□□ -1.37
CCDC54-201ENST00000261058 CTNND2Q9UQB3 1225 aa6.47□□□□□ -1.37
CCDC54-201ENST00000261058 A0A087X0B3 334 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 TCRBV16S1A1N1A0A5B0 115 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 WTIPA6NIX2 430 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms