RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 SV2BQ7L1I2 683 aa9.79□□□□□ -0.84
CALCOCO2-201ENST00000258947 TRMT1Q9NXH9 659 aaKnown RBP9.79□□□□□ -0.84
CALCOCO2-201ENST00000258947 CCPG1Q9ULG6 757 aa9.79□□□□□ -0.84
CALCOCO2-201ENST00000258947 MYH6P13533 1939 aa9.79□□□□□ -0.84
CALCOCO2-201ENST00000258947 MAST2Q6P0Q8 1798 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 GTPBP6O43824 516 aaPredicted RBP9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 SLC37A4O43826 429 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 CAP2P40123 477 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 TRAF1Q13077 416 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 DCAF15Q66K64 600 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 NSMFQ6X4W1 530 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 RNF181Q9P0P0 153 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 TUBE1Q9UJT0 475 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 COL11A2P13942 1736 aaPredicted RBP9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 DDX39AO00148 427 aaKnown RBP9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 PPP1R11O60927 126 aaPredicted RBP9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 RPN1P04843 607 aaKnown RBP9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 TPM1P09493 284 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 NBPF12Q5TAG4 269 aaPredicted RBP9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 GGA3Q9NZ52 723 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 SAMM50Q9Y512 469 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 TPM2P07951 284 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 SNHG28P0DPA3 235 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 ERCC3P19447 782 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 INPP5BP32019 993 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 CYP4A11Q02928 519 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 IL17AQ16552 155 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 GSDMAQ96QA5 445 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 VCPKMTQ9H867 229 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 SAMSN1Q9NSI8 373 aaKnown RBP9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 GDAQ9Y2T3 454 aa9.78□□□□□ -0.84
CALCOCO2-201ENST00000258947 ESYT2A0FGR8 921 aa9.77□□□□□ -0.84
CALCOCO2-201ENST00000258947 GCOM1H8Y6P7 765 aaPredicted RBP9.77□□□□□ -0.84
CALCOCO2-201ENST00000258947 PSMA7O14818 248 aa9.77□□□□□ -0.84
CALCOCO2-201ENST00000258947 POLR2MP0CAP2 368 aa9.77□□□□□ -0.84
CALCOCO2-201ENST00000258947 SKILP12757 684 aa9.77□□□□□ -0.84
CALCOCO2-201ENST00000258947 ARID5BQ14865 1188 aa9.77□□□□□ -0.84
CALCOCO2-201ENST00000258947 ZKSCAN4Q969J2 545 aaPredicted RBP9.77□□□□□ -0.84
CALCOCO2-201ENST00000258947 C16orf45Q96MC5 204 aaPredicted RBP9.77□□□□□ -0.84
CALCOCO2-201ENST00000258947 GMLQ99445 158 aa9.77□□□□□ -0.84
CALCOCO2-201ENST00000258947 PLIN4Q96Q06 1357 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 N4BP3O15049 544 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 ARHGAP4P98171 946 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 DGKZQ13574 1117 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 MTMR2Q13614 643 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 PPP1R18Q6NYC8 613 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 FAM83AQ86UY5 434 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 PPFIBP1Q86W92 1011 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 TRIML1Q8N9V2 468 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 EHMT1Q9H9B1 1298 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 TBC1D7Q9P0N9 293 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 ZHX2Q9Y6X8 837 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 NPM3O75607 178 aaKnown RBP9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 PRKCSHP14314 528 aaPredicted RBP9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 RPS12P25398 132 aaKnown RBP9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 PAK1Q13153 545 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 MCM6Q14566 821 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 NOLC1Q14978 699 aaKnown RBP eCLIP9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 ERMNQ8TAM6 284 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 NELFBQ8WX92 580 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 MKL1Q969V6 931 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 HOOK2Q96ED9 719 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 AK8Q96MA6 479 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 FHDC1Q9C0D6 1143 aaPredicted RBP9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 VPS33BQ9H267 617 aa9.77□□□□□ -0.85
CALCOCO2-201ENST00000258947 FMR1Q06787 632 aaKnown RBP eCLIP9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 EAPPQ56P03 285 aaPredicted RBP9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 WDR78Q5VTH9 848 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 MRFAP1L1Q96HT8 127 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 GMCL1Q96IK5 515 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 VPS16Q9H269 839 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 KIAA1024Q9UPX6 916 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 TMX2Q9Y320 296 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 MRPL11Q9Y3B7 192 aaKnown RBP9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 IKBKBO14920 756 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 MYCLP12524 364 aaPredicted RBP9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 STAT3P40763 770 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 CACNB1Q02641 598 aaPredicted RBP9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 GPR162Q16538 588 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 CCDC144BQ3MJ40 725 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 SULF1Q8IWU6 871 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 GMCL1P1Q8NEA9 526 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 NAP1L4Q99733 375 aaKnown RBP9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 RAVER2Q9HCJ3 691 aaKnown RBP9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 SLC39A2Q9NP94 309 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 PYCARDQ9ULZ3 195 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 CLEC11AQ9Y240 323 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 SCN9AQ15858 1988 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 MEIS1O00470 390 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 DDNO94850 711 aaPredicted RBP9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 GSDMDP57764 484 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 PLA2G4DQ86XP0 818 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 SIAH1Q8IUQ4 282 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 FAM177A1Q8N128 213 aaPredicted RBP9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 NOC3LQ8WTT2 800 aaKnown RBP9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 LARP4BQ92615 738 aaKnown RBP9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 ZNF408Q9H9D4 720 aa9.76□□□□□ -0.85
CALCOCO2-201ENST00000258947 FOSP01100 380 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms