RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Sec62Q8BU14 398 aaKnown RBP21.4■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Trim32Q8CH72 655 aa21.4■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Q3UK37 420 aa21.39■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Miga1Q4QQM5 600 aa21.39■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Bclaf1Q8K019 919 aaKnown RBP21.39■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Mrpl58Q8R035 206 aa21.39■■□□□ 1.02
Scn1b-203ENSMUST00000211945 C1qtnf12Q8R2Z0 308 aa21.39■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Ces1Q8VCC2 565 aa21.39■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Zcchc18Q8VD24 393 aa21.39■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Oip5A2AQ14 241 aa21.39■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Fscn2Q32M02 492 aa21.39■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Tmem63bQ3TWI9 832 aa21.39■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Ubash3aQ3V3E1 624 aa21.39■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Trappc3lQ4KL14 181 aa21.39■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Igf2bp2Q5SF07 592 aaKnown RBP21.39■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Nol12Q8BG17 217 aa21.39■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Dlk2Q8K1E3 382 aa21.39■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Lypla2Q9WTL7 231 aa21.39■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Mtmr9Q9Z2D0 545 aa21.39■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Cntnap2Q9CPW0 1332 aa21.38■■□□□ 1.01
Scn1b-203ENSMUST00000211945 NfkbieO54910 364 aa21.38■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Pik3r1P26450 724 aa21.38■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Bach1P97302 739 aa21.38■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Specc1Q5SXY1 1067 aa21.38■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Tpd52Q62393 224 aa21.38■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Kcnc4Q8R1C0 628 aa21.38■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Apobec3Q99J72 440 aaKnown RBP21.38■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Wfdc16A2A5H4 111 aa21.37■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Ampd3O08739 766 aa21.37■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Api5O35841 504 aaKnown RBP21.37■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Wnt7aP24383 349 aa21.37■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Eepd1Q3TGW2 569 aa21.37■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Zbtb7bQ64321 544 aa21.37■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Yars2Q8BYL4 472 aaKnown RBP21.37■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Lrrc56Q8K375 552 aa21.37■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Hs2st1Q8R3H7 356 aa21.37■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Spint1Q9R097 507 aa21.37■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Mad1l1Q9WTX8 717 aaKnown RBP21.37■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Krt28A6BLY7 462 aa21.36■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Gml2G5E8L7 176 aa21.36■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Nck2O55033 380 aa21.36■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Itgb5O70309 798 aa21.36■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Nploc4P60670 608 aa21.36■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Atp9bP98195 1146 aa21.36■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Gm28047Q3US59 414 aa21.36■■□□□ 1.01
Scn1b-203ENSMUST00000211945 AdpgkQ8VDL4 496 aa21.36■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Znf687Q9D2D7 1237 aa21.36■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Dennd4aE9Q8V6 1869 aa21.36■■□□□ 1.01
Scn1b-203ENSMUST00000211945 A0A0U1RNP2 1173 aa21.35■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Phldb3E9QAF4 648 aa21.35■■□□□ 1.01
Scn1b-203ENSMUST00000211945 TxnP10639 105 aaKnown RBP21.35■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Cdc25aP48964 514 aa21.35■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Lrrcc1Q69ZB0 1026 aa21.35■■□□□ 1.01
Scn1b-203ENSMUST00000211945 R3hcc1Q8BSI6 488 aa21.35■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Bloc1s4Q8VED2 215 aa21.35■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Pbx4Q99NE9 378 aa21.35■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Smchd1Q6P5D8 2007 aaKnown RBP21.35■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Cyp26c1B2RXA7 518 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Trdmt1O55055 415 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 LtkP08923 888 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 NfiaQ02780 532 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Mre11Q61216 706 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 GlmnQ8BZM1 596 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Srek1Q8BZX4 494 aaKnown RBP21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Ppp2r5dQ91V89 594 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Arpp21Q9DCB4 807 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Cntnap5cQ0V8T7 1305 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Gm43738A0A0G2JEA5 862 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Lnx1O70263 728 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 SfnO70456 248 aaKnown RBP21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Plekha7Q3UIL6 1118 aaKnown RBP21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Krt87Q6IMF0 495 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Nap1l4Q78ZA7 375 aaKnown RBP21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Dpp9Q8BVG4 862 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Kcnv2Q8CFS6 562 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Tbx20Q9ES03 445 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 Tfr2Q9JKX3 798 aa21.34■■□□□ 1.01
Scn1b-203ENSMUST00000211945 AunipE9Q6Z5 340 aa21.33■■□□□ 1
Scn1b-203ENSMUST00000211945 Kcna2P63141 499 aa21.33■■□□□ 1
Scn1b-203ENSMUST00000211945 Psg29Q3URN6 468 aa21.33■■□□□ 1
Scn1b-203ENSMUST00000211945 Fdxacb1Q3UY23 622 aa21.33■■□□□ 1
Scn1b-203ENSMUST00000211945 Meis1Q60954 390 aa21.33■■□□□ 1
Scn1b-203ENSMUST00000211945 Cnnm4Q69ZF7 771 aa21.33■■□□□ 1
Scn1b-203ENSMUST00000211945 Moxd2Q7TT41 619 aa21.33■■□□□ 1
Scn1b-203ENSMUST00000211945 Nipa1Q8BHK1 323 aa21.33■■□□□ 1
Scn1b-203ENSMUST00000211945 CrygnQ8VHL5 183 aa21.33■■□□□ 1
Scn1b-203ENSMUST00000211945 Znf704Q9ERQ3 566 aa21.33■■□□□ 1
Scn1b-203ENSMUST00000211945 GdaQ9R111 454 aa21.33■■□□□ 1
Scn1b-203ENSMUST00000211945 Gm5737A0A140LI11 423 aa21.32■■□□□ 1
Scn1b-203ENSMUST00000211945 Map7d1A2AJI0 846 aa21.32■■□□□ 1
Scn1b-203ENSMUST00000211945 Hoxd10P28359 340 aa21.32■■□□□ 1
Scn1b-203ENSMUST00000211945 Ktn1Q61595 1327 aaKnown RBP21.32■■□□□ 1
Scn1b-203ENSMUST00000211945 Atg4cQ811C2 458 aa21.32■■□□□ 1
Scn1b-203ENSMUST00000211945 Twf2Q9Z0P5 349 aaKnown RBP21.32■■□□□ 1
Scn1b-203ENSMUST00000211945 Lamb2Q61292 1799 aa21.31■■□□□ 1
Scn1b-203ENSMUST00000211945 Sbno2Q7TNB8 1349 aa21.31■■□□□ 1
Scn1b-203ENSMUST00000211945 Tbc1d2B1AVH7 922 aa21.31■■□□□ 1
Scn1b-203ENSMUST00000211945 Rasa1E9PYG6 1038 aa21.31■■□□□ 1
Scn1b-203ENSMUST00000211945 Mpp3O88910 568 aa21.31■■□□□ 1
Scn1b-203ENSMUST00000211945 Erbb2P70424 1256 aa21.31■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 51.5 ms