RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Sdccag8Q80UF4 717 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 BC048507Q80ZS7 89 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Igdcc3Q8BQC3 813 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 CutaQ9CQ89 177 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 VirmaA2AIV2 1811 aaKnown RBP17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Zfp646Q6NV66 1788 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Cnbd1B1AWM0 430 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Krt86P97861 486 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Lrrc55Q3UY51 311 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Pnma5Q5DTT8 618 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Akap4Q60662 849 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Lamc2Q61092 1191 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Ddx31Q6NZQ2 687 aaKnown RBP17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Armc6Q8BNU0 468 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Q8CEZ4 452 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Kiaa1024Q8K3V7 917 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Tacc2Q9JJG0 1149 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Mybl2P48972 704 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Qrich1Q3UA37 777 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Plekhg6Q8R0J1 787 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Kremen1Q99N43 473 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Pdcd6ipQ9WU78 869 aaKnown RBP17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Pip4k2aO70172 405 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Sept2P42208 361 aaKnown RBP17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Setd4P58467 439 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Cyp2e1Q05421 493 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Tmem35bQ3U0Y2 150 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Stxbp3Q60770 592 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Rasa3Q60790 834 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Mcm7Q61881 719 aaKnown RBP17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Lrrcc1Q69ZB0 1026 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Tmco3Q8BH01 678 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Pnpla2Q8BJ56 486 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Spata4Q8K3V1 295 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Tesk2Q8VCT9 570 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Uap1Q91YN5 522 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 Serpinb12Q9D7P9 423 aa17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 AdnpQ9Z103 1108 aaKnown RBP17.37■□□□□ 0.37
Vcan-201ENSMUST00000109543 StrcQ8VIM6 1809 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Etnk2A7MCT6 385 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Nedd4P46935 887 aaKnown RBP17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Fbln1Q08879 705 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Tbc1d9bQ5SVR0 1263 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Brip1Q5SXJ3 1174 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Fbxo2Q80UW2 297 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Cracr2bQ80ZJ8 394 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Znf131Q8K3J5 619 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Dhx30Q99PU8 1217 aaKnown RBP17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Dnajc7Q9QYI3 494 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Plxnb2B2RXS4 1842 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Gm7168A0AUV4 508 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Gm28042B7ZCM9 1014 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Csf1rP09581 977 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Snap25P60879 206 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Gpr101Q80T62 511 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 AacsQ9D2R0 672 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Tjap1Q9DCD5 539 aa17.36■□□□□ 0.37
Vcan-201ENSMUST00000109543 Gm45208A0A140LJ36 292 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 ByslO54825 436 aaKnown RBP17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 SarsP26638 512 aaKnown RBP17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Q66JV7 365 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Ercc6lQ8BHK9 1240 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Ttc26Q8BS45 554 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Col23a1Q8K4G2 532 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Ifih1Q8R5F7 1025 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Rab3il1Q8VDV3 383 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Glrx3Q9CQM9 337 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Ccdc105Q9D4K7 499 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 AgtP11859 477 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Abcb4P21440 1276 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Zfp781Q0P5U5 243 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Trpc6Q61143 930 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Insm1Q63ZV0 521 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Mindy1Q76LS9 468 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 MtrrQ8C1A3 696 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Hgh1Q8C3I8 393 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Ppfibp1Q8C8U0 969 aaKnown RBP17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Riox2Q8CD15 465 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Arhgef6Q8K4I3 771 aa17.35■□□□□ 0.37
Vcan-201ENSMUST00000109543 Rexo5D3YW29 759 aa17.34■□□□□ 0.37
Vcan-201ENSMUST00000109543 NpcdF8VQB8 469 aa17.34■□□□□ 0.37
Vcan-201ENSMUST00000109543 Znf280dQ68FE8 974 aa17.34■□□□□ 0.37
Vcan-201ENSMUST00000109543 Ctdp1Q7TSG2 960 aa17.34■□□□□ 0.37
Vcan-201ENSMUST00000109543 Thap3Q8BJ25 218 aa17.34■□□□□ 0.37
Vcan-201ENSMUST00000109543 Lrrc41Q8K1C9 807 aa17.34■□□□□ 0.37
Vcan-201ENSMUST00000109543 Grin3bQ91ZU9 1003 aa17.34■□□□□ 0.37
Vcan-201ENSMUST00000109543 Slc26a4Q9R155 780 aa17.34■□□□□ 0.37
Vcan-201ENSMUST00000109543 Rsrc2A2RTL5 376 aaKnown RBP17.33■□□□□ 0.37
Vcan-201ENSMUST00000109543 Ess2O70279 479 aa17.33■□□□□ 0.37
Vcan-201ENSMUST00000109543 Scfd1Q8BRF7 639 aaKnown RBP17.33■□□□□ 0.37
Vcan-201ENSMUST00000109543 Tmem39aQ9CYC3 486 aa17.33■□□□□ 0.37
Vcan-201ENSMUST00000109543 Styxl1Q9DAR2 321 aa17.33■□□□□ 0.37
Vcan-201ENSMUST00000109543 March8Q9DBD2 286 aa17.33■□□□□ 0.37
Vcan-201ENSMUST00000109543 Col1a1P11087 1453 aa17.33■□□□□ 0.36
Vcan-201ENSMUST00000109543 Chrna9G3X8Z7 479 aa17.33■□□□□ 0.36
Vcan-201ENSMUST00000109543 RaraP11416 462 aa17.33■□□□□ 0.36
Vcan-201ENSMUST00000109543 Nkx2-5P42582 318 aa17.33■□□□□ 0.36
Vcan-201ENSMUST00000109543 Hmgb1P63158 215 aaKnown RBP17.33■□□□□ 0.36
Vcan-201ENSMUST00000109543 Ncf1Q09014 390 aa17.33■□□□□ 0.36
Vcan-201ENSMUST00000109543 Vmn1r209Q5NC97 312 aa17.33■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms