Protein–RNA interactions for Protein: Q5NC97

Vmn1r209, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r209Q5NC97 Gm25239-201ENSMUST00000174915 86 ntBASIC44.01■■■■■ 4.64
Vmn1r209Q5NC97 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.63■■■■■ 4.09
Vmn1r209Q5NC97 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.06■■■■■ 4
Vmn1r209Q5NC97 Gm15042-201ENSMUST00000120212 883 ntBASIC38.59■■■■□ 3.77
Vmn1r209Q5NC97 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
Vmn1r209Q5NC97 Gm24109-201ENSMUST00000175489 103 ntBASIC38.09■■■■□ 3.69
Vmn1r209Q5NC97 Gm15045-201ENSMUST00000117359 883 ntBASIC37.77■■■■□ 3.64
Vmn1r209Q5NC97 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
Vmn1r209Q5NC97 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
Vmn1r209Q5NC97 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.19■■■■□ 3.54
Vmn1r209Q5NC97 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.13■■■■□ 3.53
Vmn1r209Q5NC97 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
Vmn1r209Q5NC97 Gm23366-201ENSMUST00000175022 89 ntBASIC36.76■■■■□ 3.48
Vmn1r209Q5NC97 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
Vmn1r209Q5NC97 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Vmn1r209Q5NC97 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.98■■■■□ 3.35
Vmn1r209Q5NC97 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
Vmn1r209Q5NC97 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.77■■■■□ 3.32
Vmn1r209Q5NC97 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
Vmn1r209Q5NC97 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.58■■■■□ 3.29
Vmn1r209Q5NC97 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Vmn1r209Q5NC97 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.44■■■■□ 3.26
Vmn1r209Q5NC97 Psd-208ENSMUST00000224556 2034 ntBASIC35.44■■■■□ 3.26
Vmn1r209Q5NC97 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.41■■■■□ 3.26
Vmn1r209Q5NC97 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.38■■■■□ 3.25
Vmn1r209Q5NC97 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.37■■■■□ 3.25
Vmn1r209Q5NC97 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Vmn1r209Q5NC97 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.27■■■■□ 3.24
Vmn1r209Q5NC97 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.2■■■■□ 3.23
Vmn1r209Q5NC97 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.04■■■■□ 3.2
Vmn1r209Q5NC97 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.02■■■■□ 3.2
Vmn1r209Q5NC97 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Vmn1r209Q5NC97 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Vmn1r209Q5NC97 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Vmn1r209Q5NC97 Gm25238-201ENSMUST00000174914 89 ntBASIC34.69■■■■□ 3.14
Vmn1r209Q5NC97 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.64■■■■□ 3.14
Vmn1r209Q5NC97 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.59■■■■□ 3.13
Vmn1r209Q5NC97 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Vmn1r209Q5NC97 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Vmn1r209Q5NC97 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Vmn1r209Q5NC97 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.33■■■■□ 3.09
Vmn1r209Q5NC97 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Vmn1r209Q5NC97 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Vmn1r209Q5NC97 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.03■■■■□ 3.04
Vmn1r209Q5NC97 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.94■■■■□ 3.02
Vmn1r209Q5NC97 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.93■■■■□ 3.02
Vmn1r209Q5NC97 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Vmn1r209Q5NC97 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.86■■■■□ 3.01
Vmn1r209Q5NC97 Gm27325-201ENSMUST00000175467 74 ntBASIC33.84■■■■□ 3.01
Vmn1r209Q5NC97 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
Vmn1r209Q5NC97 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Vmn1r209Q5NC97 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.69■■■□□ 2.98
Vmn1r209Q5NC97 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.64■■■□□ 2.98
Vmn1r209Q5NC97 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.53■■■□□ 2.96
Vmn1r209Q5NC97 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Vmn1r209Q5NC97 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.5■■■□□ 2.95
Vmn1r209Q5NC97 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.45■■■□□ 2.94
Vmn1r209Q5NC97 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Vmn1r209Q5NC97 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Vmn1r209Q5NC97 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Vmn1r209Q5NC97 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.21■■■□□ 2.91
Vmn1r209Q5NC97 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Vmn1r209Q5NC97 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Vmn1r209Q5NC97 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Vmn1r209Q5NC97 Gm25262-201ENSMUST00000174934 133 ntBASIC33.14■■■□□ 2.9
Vmn1r209Q5NC97 Rab21-202ENSMUST00000218831 843 ntBASIC33.14■■■□□ 2.9
Vmn1r209Q5NC97 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Vmn1r209Q5NC97 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.08■■■□□ 2.89
Vmn1r209Q5NC97 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
Vmn1r209Q5NC97 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Vmn1r209Q5NC97 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
Vmn1r209Q5NC97 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.01■■■□□ 2.87
Vmn1r209Q5NC97 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Vmn1r209Q5NC97 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Vmn1r209Q5NC97 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.92■■■□□ 2.86
Vmn1r209Q5NC97 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
Vmn1r209Q5NC97 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Vmn1r209Q5NC97 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Vmn1r209Q5NC97 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Vmn1r209Q5NC97 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Vmn1r209Q5NC97 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.76■■■□□ 2.83
Vmn1r209Q5NC97 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.73■■■□□ 2.83
Vmn1r209Q5NC97 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.71■■■□□ 2.83
Vmn1r209Q5NC97 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.68■■■□□ 2.82
Vmn1r209Q5NC97 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Vmn1r209Q5NC97 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Vmn1r209Q5NC97 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Vmn1r209Q5NC97 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.61■■■□□ 2.81
Vmn1r209Q5NC97 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
Vmn1r209Q5NC97 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.53■■■□□ 2.8
Vmn1r209Q5NC97 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Vmn1r209Q5NC97 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Vmn1r209Q5NC97 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.48■■■□□ 2.79
Vmn1r209Q5NC97 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Vmn1r209Q5NC97 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Vmn1r209Q5NC97 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Vmn1r209Q5NC97 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.25■■■□□ 2.75
Vmn1r209Q5NC97 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.25■■■□□ 2.75
Vmn1r209Q5NC97 Gm26115-201ENSMUST00000175605 87 ntBASIC32.25■■■□□ 2.75
Vmn1r209Q5NC97 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms