RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Pkp1P97350 728 aaKnown RBP7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Rasa3Q60790 834 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Atp1a3Q6PIC6 1013 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Lrrc59Q922Q8 307 aaKnown RBP7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Dach1Q9QYB2 751 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Ror2Q9Z138 944 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Mtmr7Q9Z2C9 660 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Cfap70D3YVL2 1141 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Card6E9PWH2 1175 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Actn3O88990 900 aaKnown RBP7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Casp14O89094 257 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Tmod1P49813 359 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Stx1bP61264 288 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 AsnsQ61024 561 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Zrsr1Q64707 428 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Slc18a1Q8R090 521 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Ppp2r5dQ91V89 594 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Akap5D3YVF0 745 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Ift81O35594 676 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Vti1aO89116 217 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Ephb4P54761 987 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Dab2P98078 766 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Stx2Q00262 289 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Krt26Q3TRJ4 462 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Sval3Q76I99 144 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Stk38lQ7TSE6 464 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Ehd2Q8BH64 543 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Csgalnact2Q8C1F4 542 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 HibadhQ99L13 335 aaKnown RBP7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Gm43638A0A0J9YU36 694 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Pcif1P59114 706 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Mphosph8Q3TYA6 858 aaKnown RBP7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Nr1d1Q3UV55 615 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 BcrQ6PAJ1 1270 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 CnstQ8CBC4 711 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Pde6cQ91ZQ1 861 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Nek8Q91ZR4 698 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Dot1lQ6XZL8 1540 aa7.1□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Evi5P97366 809 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 InhbaQ04998 424 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Zbtb45Q52KG4 520 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 LrmpQ60664 539 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Elf1Q60775 612 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Acad11Q80XL6 779 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Q80ZQ3 298 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Basp1Q91XV3 226 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Flot1O08917 428 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Axin2O88566 840 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Ccdc153P0C7Q1 202 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Gja8P28236 440 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Nub1P54729 614 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Tor4aQ8BH02 426 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Cog5Q8C0L8 829 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Cep57Q8CEE0 500 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Pstpip2Q99M15 334 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 TbcbQ9D1E6 244 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Galnt15Q9D2N8 638 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 MycbpQ9EQS3 103 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Pex3Q9QXY9 372 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Usp42B2RQC2 1324 aaKnown RBP7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Supt3B0QZW4 406 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Pagr1bF6V0H0 108 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Aoc3O70423 765 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Pde4aO89084 844 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Ppp1r1bQ60829 194 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 MarsQ68FL6 902 aaKnown RBP7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Tmtc4Q8BG19 741 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Ttll1Q91V51 423 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Pcdhb12Q91Y07 789 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Pagr1aQ99L02 253 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Kdm8Q9CXT6 414 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Gemin5Q8BX17 1502 aaKnown RBP7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Gm6588E9Q3K0 461 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Oxr1Q4KMM3 866 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Prpsap2Q8R574 369 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Fam133bQ9CVI2 245 aaKnown RBP7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Serpina9Q9D7D2 418 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Cbx6Q9DBY5 414 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Ppp1r2Q9DCL8 206 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Orc3Q9JK30 715 aaKnown RBP7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Txnrd1Q9JMH6 613 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 A0A286YCQ6 122 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Parp2O88554 559 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 MaeaQ4VC33 396 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Cnksr2Q80YA9 1032 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Hps6Q8BLY7 805 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Rint1Q8BZ36 792 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Sdr42e1Q9D665 394 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 MrgbpQ9DAT2 204 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Abca16E9PWJ7 1678 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 IkbkbO88351 757 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Sycp3P70281 254 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Trip13Q3UA06 432 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Cplx3Q8R1B5 158 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Ophn1Q99J31 802 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Nxf1Q99JX7 618 aaKnown RBP7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Tex9Q9D845 387 aa7.09□□□□□ -1.27
Scn1a-201ENSMUST00000077489 Kiaa1551Q5DTW7 1521 aa7.09□□□□□ -1.28
Scn1a-201ENSMUST00000077489 Cyp11b2P15539 500 aa7.09□□□□□ -1.28
Scn1a-201ENSMUST00000077489 Sema3eP70275 775 aa7.09□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 80.7 ms