RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR78, Length 87 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR78	snR78	CBF2	P32504	956 aa		4.68	□□□□□ -1.66
snR78	snR78	ICS2	P38284	255 aa		4.68	□□□□□ -1.66
snR78	snR78	SNG1	P46950	547 aa		4.68	□□□□□ -1.66
snR78	snR78	ENT4	Q07872	247 aa		4.68	□□□□□ -1.66
snR78	snR78	SGV1	P23293	657 aa	Known RBP	4.67	□□□□□ -1.66
snR78	snR78	BOS1	P25385	244 aa		4.67	□□□□□ -1.66
snR78	snR78	SAC6	P32599	642 aa	Known RBP	4.67	□□□□□ -1.66
snR78	snR78	TIF3	P34167	436 aa	Known RBP	4.67	□□□□□ -1.66
snR78	snR78	PMU1	P36069	295 aa		4.67	□□□□□ -1.66
snR78	snR78	TUL1	P36096	758 aa		4.67	□□□□□ -1.66
snR78	snR78	YKL023W	P36103	277 aa	Known RBP	4.67	□□□□□ -1.66
snR78	snR78	MRPL4	P36517	319 aa		4.67	□□□□□ -1.66
snR78	snR78	MAL33	P38157	468 aa		4.67	□□□□□ -1.66
snR78	snR78	LYS4	P49367	693 aa	Predicted RBP	4.67	□□□□□ -1.66
snR78	snR78	ALT2	P52892	507 aa		4.67	□□□□□ -1.66
snR78	snR78	BUD32	P53323	261 aa		4.67	□□□□□ -1.66
snR78	snR78	CBK1	P53894	756 aa		4.67	□□□□□ -1.66
snR78	snR78	EFM6	P53970	246 aa		4.67	□□□□□ -1.66
snR78	snR78	SYO1	Q07395	620 aa		4.67	□□□□□ -1.66
snR78	snR78	YDL009C	Q12210	107 aa		4.67	□□□□□ -1.66
snR78	snR78	AMD1	P15274	810 aa	Known RBP	4.66	□□□□□ -1.66
snR78	snR78	PRE8	P23639	250 aa		4.66	□□□□□ -1.66
snR78	snR78	LDB16	P25587	256 aa		4.66	□□□□□ -1.66
snR78	snR78	YBL055C	P34220	418 aa	Predicted RBP	4.66	□□□□□ -1.66
snR78	snR78	YEL068C	P39977	110 aa		4.66	□□□□□ -1.66
snR78	snR78	FAR3	P46671	204 aa		4.66	□□□□□ -1.66
snR78	snR78	KGD1	P20967	1014 aa	Known RBP	4.65	□□□□□ -1.67
snR78	snR78	PUP3	P25451	205 aa	Known RBP	4.65	□□□□□ -1.67
snR78	snR78	SGF29	P25554	259 aa		4.65	□□□□□ -1.67
snR78	snR78	YCR022C	P25620	114 aa		4.65	□□□□□ -1.67
snR78	snR78	SYN8	P31377	255 aa		4.65	□□□□□ -1.67
snR78	snR78	RPL32	P38061	130 aa	Known RBP	4.65	□□□□□ -1.67
snR78	snR78	IES5	P40060	125 aa		4.65	□□□□□ -1.67
snR78	snR78	SHO1	P40073	367 aa		4.65	□□□□□ -1.67
snR78	snR78	SIP4	P46954	829 aa		4.65	□□□□□ -1.67
snR78	snR78	ATR1	P13090	542 aa		4.64	□□□□□ -1.67
snR78	snR78	IMG1	P25626	169 aa		4.64	□□□□□ -1.67
snR78	snR78	NUP133	P36161	1157 aa		4.64	□□□□□ -1.67
snR78	snR78	TPM2	P40414	161 aa		4.64	□□□□□ -1.67
snR78	snR78	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
snR78	snR78	DSD1	P53095	428 aa		4.64	□□□□□ -1.67
snR78	snR78	WSC2	P53832	503 aa		4.64	□□□□□ -1.67
snR78	snR78	ATG16	Q03818	150 aa		4.64	□□□□□ -1.67
snR78	snR78	RAD30	Q04049	632 aa		4.64	□□□□□ -1.67
snR78	snR78	RER1	P25560	188 aa		4.63	□□□□□ -1.67
snR78	snR78	RRN3	P36070	627 aa		4.63	□□□□□ -1.67
snR78	snR78	ARC1	P46672	376 aa	Known RBP	4.63	□□□□□ -1.67
snR78	snR78	YGR126W	P53274	230 aa		4.63	□□□□□ -1.67
snR78	snR78	MRPL51	Q06090	140 aa	Predicted RBP	4.63	□□□□□ -1.67
snR78	snR78	VIP1	Q06685	1146 aa	Known RBP	4.63	□□□□□ -1.67
snR78	snR78	YDL057W	Q07379	328 aa		4.63	□□□□□ -1.67
snR78	snR78	YCL021W-A	Q96VH3	125 aa		4.63	□□□□□ -1.67
snR78	snR78	CDC24	P11433	854 aa	Predicted RBP	4.62	□□□□□ -1.67
snR78	snR78	SUI2	P20459	304 aa	Known RBP	4.62	□□□□□ -1.67
snR78	snR78	AUR1	P36107	401 aa	Predicted RBP	4.62	□□□□□ -1.67
snR78	snR78	ALG8	P40351	577 aa		4.62	□□□□□ -1.67
snR78	snR78	MSC1	Q03104	513 aa		4.62	□□□□□ -1.67
snR78	snR78	BNA5	Q05979	453 aa		4.62	□□□□□ -1.67
snR78	snR78	SKM1	Q12469	655 aa		4.62	□□□□□ -1.67
snR78	snR78	ARD1	P07347	238 aa	Predicted RBP	4.61	□□□□□ -1.67
snR78	snR78	PMR1	P13586	950 aa		4.61	□□□□□ -1.67
snR78	snR78	FRE1	P32791	686 aa		4.61	□□□□□ -1.67
snR78	snR78	FAA2	P39518	744 aa		4.61	□□□□□ -1.67
snR78	snR78	YJR008W	P47085	338 aa		4.61	□□□□□ -1.67
snR78	snR78	BSC5	P53755	489 aa		4.61	□□□□□ -1.67
snR78	snR78	SLD5	Q03406	294 aa		4.61	□□□□□ -1.67
snR78	snR78	BUD22	Q04347	519 aa	Known RBP	4.61	□□□□□ -1.67
snR78	snR78	HNT3	Q08702	217 aa		4.61	□□□□□ -1.67
snR78	snR78	MF(ALPHA)1	P01149	165 aa		4.6	□□□□□ -1.67
snR78	snR78	FUM1	P08417	488 aa	Known RBP	4.6	□□□□□ -1.67
snR78	snR78	YBR144C	P34215	104 aa		4.6	□□□□□ -1.67
snR78	snR78	YJR154W	P47181	346 aa		4.6	□□□□□ -1.67
snR78	snR78	VMS1	Q04311	632 aa	Known RBP	4.6	□□□□□ -1.67
snR78	snR78	NCE102	Q12207	173 aa	RIP-Chip data	4.6	□□□□□ -1.67	not detected
snR78	snR78	SSE2	P32590	693 aa	Known RBP	4.59	□□□□□ -1.67
snR78	snR78	AFG3	P39925	761 aa		4.59	□□□□□ -1.67
snR78	snR78	MSO1	P53604	210 aa	Known RBP	4.59	□□□□□ -1.67
snR78	snR78	IRC15	Q02733	499 aa		4.59	□□□□□ -1.67
snR78	snR78	IVY1	Q04934	453 aa		4.59	□□□□□ -1.67
snR78	snR78	VPS74	Q06385	345 aa		4.59	□□□□□ -1.67
snR78	snR78	LUC7	Q07508	261 aa	Predicted RBP	4.59	□□□□□ -1.67
snR78	snR78	YCR007C	P25354	239 aa		4.58	□□□□□ -1.68
snR78	snR78	FUN19	P28003	413 aa	Predicted RBP	4.58	□□□□□ -1.68
snR78	snR78	UBP11	P36026	717 aa		4.58	□□□□□ -1.68
snR78	snR78	CIN4	P39110	191 aa		4.58	□□□□□ -1.68
snR78	snR78	APT1	P49435	187 aa	Known RBP	4.58	□□□□□ -1.68
snR78	snR78	PUT3	P25502	979 aa	Predicted RBP	4.57	□□□□□ -1.68
snR78	snR78	YIH1	P25637	258 aa		4.57	□□□□□ -1.68
snR78	snR78	YHR210C	P38893	341 aa		4.57	□□□□□ -1.68
snR78	snR78	RBG2	P53295	368 aa	Known RBP	4.57	□□□□□ -1.68
snR78	snR78	HEL2	Q05580	639 aa	Known RBP	4.57	□□□□□ -1.68
snR78	snR78	CTF3	Q12748	733 aa		4.57	□□□□□ -1.68
snR78	snR78	RAD52	P06778	471 aa	Known RBP	4.56	□□□□□ -1.68
snR78	snR78	EXO70	P19658	623 aa		4.56	□□□□□ -1.68
snR78	snR78	HAT2	P39984	401 aa		4.56	□□□□□ -1.68
snR78	snR78	YSA1	Q01976	231 aa		4.56	□□□□□ -1.68
snR78	snR78	YOR365C	Q08844	703 aa		4.56	□□□□□ -1.68
snR78	snR78	YPL272C	Q08984	517 aa		4.56	□□□□□ -1.68
snR78	snR78	LSP1	Q12230	341 aa	Known RBP	4.56	□□□□□ -1.68
snR78	snR78	UTR4	P32626	227 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 81.3 ms