RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeast

Gene SSO1, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSO1	YPL232W	YAR066W	P0CX18	203 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	YHR214W	P0CX19	203 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	ERG11	P10614	530 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	ARG1	P22768	420 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	TSR4	P25040	408 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	MXR2	P25566	168 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	YJU2	P28320	278 aa	Predicted RBP	4.99	□□□□□ -1.61
SSO1	YPL232W	KIP2	P28743	706 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	RPS27A	P35997	82 aa	Known RBP	4.99	□□□□□ -1.61
SSO1	YPL232W	MRP21	P38175	177 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	RPS27B	P38711	82 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	YHR127W	P38833	243 aa	Known RBP	4.99	□□□□□ -1.61
SSO1	YPL232W	CUP9	P41817	306 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	BNA3	P47039	444 aa	Known RBP	4.99	□□□□□ -1.61
SSO1	YPL232W	PEX8	P53248	589 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	ERG13	P54839	491 aa	Known RBP	4.99	□□□□□ -1.61
SSO1	YPL232W	YDR209C	Q03480	137 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	RPN9	Q04062	393 aa	Known RBP	4.99	□□□□□ -1.61
SSO1	YPL232W	SLD7	Q08457	257 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	YPR022C	Q12139	1133 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	HOS1	Q12214	470 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	AVL9	Q12500	764 aa		4.99	□□□□□ -1.61
SSO1	YPL232W	CLN2	P20438	545 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	YCR099C	P25657	155 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	HRR25	P29295	494 aa	Known RBP	4.98	□□□□□ -1.61
SSO1	YPL232W	MF(ALPHA)2	P32435	120 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	KRE6	P32486	720 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
SSO1	YPL232W	SMI1	P32566	505 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	CNS1	P33313	385 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	MCM7	P38132	845 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	MEF2	P39677	819 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	YEL057C	P39983	233 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	PXA1	P41909	870 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	HOL1	P53389	586 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	BSC5	P53755	489 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	SLU7	Q02775	382 aa	Known RBP	4.98	□□□□□ -1.61
SSO1	YPL232W	TFB2	Q02939	513 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	YDR541C	Q03049	344 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	ENT4	Q07872	247 aa		4.98	□□□□□ -1.61
SSO1	YPL232W	INO1	P11986	533 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	KIN2	P13186	1147 aa	Known RBP	4.97	□□□□□ -1.61
SSO1	YPL232W	MET8	P15807	274 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	CLB1	P24868	471 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	AGP1	P25376	633 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	GID7	P25569	745 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	THI80	P35202	319 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	PCH2	P38126	564 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	PAC1	P39946	494 aa	Known RBP	4.97	□□□□□ -1.61
SSO1	YPL232W	YEL020C	P39994	560 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	BAP3	P41815	604 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	PET130	P47065	347 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	HOC1	P47124	396 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	MPS2	P53159	387 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	CPR6	P53691	371 aa	Known RBP	4.97	□□□□□ -1.61
SSO1	YPL232W	SSL2	Q00578	843 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	YDR109C	Q04585	715 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	ROY1	Q04847	553 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	YPS7	Q06325	596 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	NOP6	Q07623	225 aa	Known RBP	4.97	□□□□□ -1.61
SSO1	YPL232W	HER1	Q12276	1246 aa		4.97	□□□□□ -1.61
SSO1	YPL232W	YLR462W	O13556	202 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	ERG20	P08524	352 aa	Known RBP	4.96	□□□□□ -1.62
SSO1	YPL232W	PHO3	P24031	467 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	CHA1	P25379	360 aa	Known RBP	4.96	□□□□□ -1.62
SSO1	YPL232W	ADE1	P27616	306 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	RCK2	P38623	610 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	YHL049C	P38722	271 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	SMF2	P38778	549 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	AXL2	P38928	823 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	RPS26A	P39938	119 aa	Known RBP	4.96	□□□□□ -1.62
SSO1	YPL232W	RPS26B	P39939	119 aa	Known RBP	4.96	□□□□□ -1.62
SSO1	YPL232W	SPF1	P39986	1215 aa	Known RBP	4.96	□□□□□ -1.62
SSO1	YPL232W	VRG4	P40107	337 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	ATG3	P40344	310 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	TFG2	P41896	400 aa	Predicted RBP	4.96	□□□□□ -1.62
SSO1	YPL232W	YFL064C	P43540	174 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	PMT4	P46971	762 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	ATG36	P46983	293 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	ERG5	P54781	538 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	DIG1	Q03063	452 aa	Known RBP	4.96	□□□□□ -1.62
SSO1	YPL232W	NHX1	Q04121	633 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	YDR056C	Q12025	205 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	DAS2	Q12084	232 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	ATG29	Q12092	213 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	YBL111C	Q3E7Y5	667 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	TY4A-H	Q6Q5P6	413 aa		4.96	□□□□□ -1.62
SSO1	YPL232W	QCR6	P00127	147 aa		4.95	□□□□□ -1.62
SSO1	YPL232W	RPP2B	P02400	110 aa	Known RBP	4.95	□□□□□ -1.62
SSO1	YPL232W	NSP1	P14907	823 aa	Known RBP	4.95	□□□□□ -1.62
SSO1	YPL232W	SBA1	P28707	216 aa	Known RBP	4.95	□□□□□ -1.62
SSO1	YPL232W	TPS2	P31688	896 aa	Known RBP	4.95	□□□□□ -1.62
SSO1	YPL232W	RPN12	P32496	274 aa		4.95	□□□□□ -1.62
SSO1	YPL232W	RRP1	P35178	278 aa	Predicted RBP	4.95	□□□□□ -1.62
SSO1	YPL232W	TOM20	P35180	183 aa		4.95	□□□□□ -1.62
SSO1	YPL232W	KES1	P35844	434 aa	Known RBP	4.95	□□□□□ -1.62
SSO1	YPL232W	LHS1	P36016	881 aa		4.95	□□□□□ -1.62
SSO1	YPL232W	YBR139W	P38109	508 aa		4.95	□□□□□ -1.62
SSO1	YPL232W	YHR112C	P38716	378 aa		4.95	□□□□□ -1.62
SSO1	YPL232W	LSM4	P40070	187 aa	Known RBP	4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms