RNA–Protein interactions for RNA: YPL160W

CDC60, Transcript of Cytosolic leucyl tRNA synthetase, yeastyeast

Gene CDC60, Length 3,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC60YPL160W MPS3P47069 682 aa2.05□□□□□ -2.08
CDC60YPL160W YNL247WP53852 767 aaKnown RBP2.05□□□□□ -2.08
CDC60YPL160W DAK1P54838 584 aaKnown RBP2.05□□□□□ -2.08
CDC60YPL160W MRS2Q01926 470 aa2.05□□□□□ -2.08
CDC60YPL160W KAP120Q02932 1032 aa2.05□□□□□ -2.08
CDC60YPL160W ABZ2Q03266 374 aa2.05□□□□□ -2.08
CDC60YPL160W VPS60Q03390 229 aa2.05□□□□□ -2.08
CDC60YPL160W RAD33Q04231 177 aa2.05□□□□□ -2.08
CDC60YPL160W MSC3Q05812 728 aa2.05□□□□□ -2.08
CDC60YPL160W ATG23Q06671 453 aa2.05□□□□□ -2.08
CDC60YPL160W TCO89Q08921 799 aa2.05□□□□□ -2.08
CDC60YPL160W OM45P16547 393 aa2.04□□□□□ -2.08
CDC60YPL160W YIH1P25637 258 aa2.04□□□□□ -2.08
CDC60YPL160W OMA1P36163 345 aa2.04□□□□□ -2.08
CDC60YPL160W PIM1P36775 1133 aa2.04□□□□□ -2.08
CDC60YPL160W SLM4P38247 162 aa2.04□□□□□ -2.08
CDC60YPL160W TIF5P38431 405 aaKnown RBP2.04□□□□□ -2.08
CDC60YPL160W YHR054CP38780 354 aa2.04□□□□□ -2.08
CDC60YPL160W CHS6P40955 746 aa2.04□□□□□ -2.08
CDC60YPL160W YJL107CP42947 387 aa2.04□□□□□ -2.08
CDC60YPL160W AIP1P46680 615 aaKnown RBP2.04□□□□□ -2.08
CDC60YPL160W TOM22P49334 152 aa2.04□□□□□ -2.08
CDC60YPL160W OGG1P53397 376 aaPredicted RBP2.04□□□□□ -2.08
CDC60YPL160W HST1P53685 503 aa2.04□□□□□ -2.08
CDC60YPL160W BOP3P53958 396 aa2.04□□□□□ -2.08
CDC60YPL160W CTK1Q03957 528 aaKnown RBP2.04□□□□□ -2.08
CDC60YPL160W MGR3Q04472 501 aa2.04□□□□□ -2.08
CDC60YPL160W UBX3Q12229 455 aa2.04□□□□□ -2.08
CDC60YPL160W AVL9Q12500 764 aa2.04□□□□□ -2.08
CDC60YPL160W CTF3Q12748 733 aa2.04□□□□□ -2.08
CDC60YPL160W KRE5P22023 1365 aa2.04□□□□□ -2.08
CDC60YPL160W NUP192P47054 1683 aa2.04□□□□□ -2.08
CDC60YPL160W APN1P22936 367 aa2.04□□□□□ -2.08
CDC60YPL160W YME2P32843 850 aa2.04□□□□□ -2.08
CDC60YPL160W HES1P35843 434 aa2.04□□□□□ -2.08
CDC60YPL160W MIC60P36112 540 aa2.04□□□□□ -2.08
CDC60YPL160W NTR2P36118 322 aaPredicted RBP2.04□□□□□ -2.08
CDC60YPL160W YDR089WP38966 869 aa2.04□□□□□ -2.08
CDC60YPL160W MEF2P39677 819 aa2.04□□□□□ -2.08
CDC60YPL160W UBC11P52492 156 aa2.04□□□□□ -2.08
CDC60YPL160W PAN2P53010 1115 aaPredicted RBP2.04□□□□□ -2.08
CDC60YPL160W YGR111WP53265 400 aa2.04□□□□□ -2.08
CDC60YPL160W RHO5P53879 331 aaKnown RBP2.04□□□□□ -2.08
CDC60YPL160W EFM6P53970 246 aa2.04□□□□□ -2.08
CDC60YPL160W KIN4Q01919 800 aa2.04□□□□□ -2.08
CDC60YPL160W YMR160WQ03823 816 aa2.04□□□□□ -2.08
CDC60YPL160W GGA1Q06336 557 aa2.04□□□□□ -2.08
CDC60YPL160W ECM30Q06673 1274 aa2.04□□□□□ -2.08
CDC60YPL160W YDL242WQ07746 117 aa2.04□□□□□ -2.08
CDC60YPL160W NOP12Q08208 459 aaKnown RBP2.04□□□□□ -2.08
CDC60YPL160W ERG27Q12452 347 aaKnown RBP2.04□□□□□ -2.08
CDC60YPL160W TAO3P40468 2376 aa2.04□□□□□ -2.08
CDC60YPL160W YBR085C-AO43137 85 aa2.04□□□□□ -2.08
CDC60YPL160W RNA1P11745 407 aaKnown RBP2.04□□□□□ -2.08
CDC60YPL160W PET123P17558 318 aa2.04□□□□□ -2.08
CDC60YPL160W PRP28P23394 588 aa2.04□□□□□ -2.08
CDC60YPL160W PUP3P25451 205 aaKnown RBP2.04□□□□□ -2.08
CDC60YPL160W CNE1P27825 502 aa2.04□□□□□ -2.08
CDC60YPL160W SWC3P31376 625 aa2.04□□□□□ -2.08
CDC60YPL160W APT2P36973 181 aa2.04□□□□□ -2.08
CDC60YPL160W CTP1P38152 299 aa2.04□□□□□ -2.08
CDC60YPL160W FKH2P41813 862 aa2.04□□□□□ -2.08
CDC60YPL160W HXT14P42833 540 aa2.04□□□□□ -2.08
CDC60YPL160W CCT7P42943 550 aaKnown RBP2.04□□□□□ -2.08
CDC60YPL160W CTR1P49573 406 aa2.04□□□□□ -2.08
CDC60YPL160W YAT1P80235 687 aa2.04□□□□□ -2.08
CDC60YPL160W ACL4Q03771 387 aa2.04□□□□□ -2.08
CDC60YPL160W COQ9Q05779 260 aa2.04□□□□□ -2.08
CDC60YPL160W CRN1Q06440 651 aa2.04□□□□□ -2.08
CDC60YPL160W NDL1Q06568 189 aa2.04□□□□□ -2.08
CDC60YPL160W SWA2Q06677 668 aa2.04□□□□□ -2.08
CDC60YPL160W CSR2Q12734 1121 aa2.04□□□□□ -2.08
CDC60YPL160W COX3P00420 269 aa2.03□□□□□ -2.08
CDC60YPL160W STE4P18851 423 aa2.03□□□□□ -2.08
CDC60YPL160W MSB1P21339 1137 aaKnown RBP2.03□□□□□ -2.08
CDC60YPL160W PRE8P23639 250 aa2.03□□□□□ -2.08
CDC60YPL160W PAP1P29468 568 aaKnown RBP2.03□□□□□ -2.08
CDC60YPL160W FAA1P30624 700 aaKnown RBP2.03□□□□□ -2.08
CDC60YPL160W ZUO1P32527 433 aaKnown RBP2.03□□□□□ -2.08
CDC60YPL160W SSE2P32590 693 aaKnown RBP2.03□□□□□ -2.08
CDC60YPL160W ELF1P36053 145 aa2.03□□□□□ -2.08
CDC60YPL160W AAP1P37898 856 aaKnown RBP2.03□□□□□ -2.08
CDC60YPL160W SEC31P38968 1273 aaKnown RBP2.03□□□□□ -2.08
CDC60YPL160W ELP2P42935 788 aa2.03□□□□□ -2.08
CDC60YPL160W STB2P46679 850 aa2.03□□□□□ -2.08
CDC60YPL160W RPS7BP48164 190 aaKnown RBP2.03□□□□□ -2.08
CDC60YPL160W VPS73P53142 486 aaKnown RBP2.03□□□□□ -2.08
CDC60YPL160W DRN1P53255 507 aaKnown RBP2.03□□□□□ -2.08
CDC60YPL160W SLG1P54867 378 aa2.03□□□□□ -2.08
CDC60YPL160W VTC3Q02725 835 aa2.03□□□□□ -2.08
CDC60YPL160W FIN1Q03898 291 aa2.03□□□□□ -2.08
CDC60YPL160W SPH1Q06160 661 aa2.03□□□□□ -2.08
CDC60YPL160W DIA2Q08496 732 aaPredicted RBP2.03□□□□□ -2.08
CDC60YPL160W APL4Q12028 832 aa2.03□□□□□ -2.08
CDC60YPL160W RTC5Q12108 567 aaKnown RBP2.03□□□□□ -2.08
CDC60YPL160W NCE102Q12207 173 aaRIP-Chip data2.03□□□□□ -2.08not detected
CDC60YPL160W MDY2Q12285 212 aa2.03□□□□□ -2.08
CDC60YPL160W SSK22P25390 1331 aaPredicted RBP2.03□□□□□ -2.08
CDC60YPL160W COX1P00401 534 aa2.03□□□□□ -2.08
CDC60YPL160W SEC12P11655 471 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms