RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W YGR127WP53275 312 aa2.67□□□□□ -1.98
CTK3YML112W EFM6P53970 246 aa2.67□□□□□ -1.98
CTK3YML112W SHR3Q02774 210 aa2.67□□□□□ -1.98
CTK3YML112W FUM1P08417 488 aaKnown RBP2.66□□□□□ -1.98
CTK3YML112W RPL20AP0CX23 172 aaKnown RBP2.66□□□□□ -1.98
CTK3YML112W RPL20BP0CX24 172 aaPredicted RBP2.66□□□□□ -1.98
CTK3YML112W BOS1P25385 244 aa2.66□□□□□ -1.98
CTK3YML112W PUP3P25451 205 aaKnown RBP2.66□□□□□ -1.98
CTK3YML112W AUR1P36107 401 aaPredicted RBP2.66□□□□□ -1.98
CTK3YML112W PCA1P38360 1216 aa2.66□□□□□ -1.98
CTK3YML112W SPG5P42933 373 aa2.66□□□□□ -1.98
CTK3YML112W FAR3P46671 204 aa2.66□□□□□ -1.98
CTK3YML112W ARC1P46672 376 aaKnown RBP2.66□□□□□ -1.98
CTK3YML112W SNG1P46950 547 aa2.66□□□□□ -1.98
CTK3YML112W RLI1Q03195 608 aaKnown RBP2.66□□□□□ -1.98
CTK3YML112W RAD30Q04049 632 aa2.66□□□□□ -1.98
CTK3YML112W SYO1Q07395 620 aa2.66□□□□□ -1.98
CTK3YML112W SKM1Q12469 655 aa2.66□□□□□ -1.98
CTK3YML112W CAR1P00812 333 aaKnown RBP2.65□□□□□ -1.99
CTK3YML112W CDC24P11433 854 aaPredicted RBP2.65□□□□□ -1.99
CTK3YML112W REV1P12689 985 aa2.65□□□□□ -1.99
CTK3YML112W SUI2P20459 304 aaKnown RBP2.65□□□□□ -1.99
CTK3YML112W IMG1P25626 169 aa2.65□□□□□ -1.99
CTK3YML112W DPB3P27344 201 aa2.65□□□□□ -1.99
CTK3YML112W SAC6P32599 642 aaKnown RBP2.65□□□□□ -1.99
CTK3YML112W YBL055CP34220 418 aaPredicted RBP2.65□□□□□ -1.99
CTK3YML112W YKL023WP36103 277 aaKnown RBP2.65□□□□□ -1.99
CTK3YML112W NUP133P36161 1157 aa2.65□□□□□ -1.99
CTK3YML112W RPL32P38061 130 aaKnown RBP2.65□□□□□ -1.99
CTK3YML112W TIF5P38431 405 aaKnown RBP2.65□□□□□ -1.99
CTK3YML112W IDP2P41939 412 aa2.65□□□□□ -1.99
CTK3YML112W ALT2P52892 507 aa2.65□□□□□ -1.99
CTK3YML112W BUD32P53323 261 aa2.65□□□□□ -1.99
CTK3YML112W BSC5P53755 489 aa2.65□□□□□ -1.99
CTK3YML112W MSC1Q03104 513 aa2.65□□□□□ -1.99
CTK3YML112W HEM2P05373 342 aa2.64□□□□□ -1.99
CTK3YML112W ARD1P07347 238 aaPredicted RBP2.64□□□□□ -1.99
CTK3YML112W AMD1P15274 810 aaKnown RBP2.64□□□□□ -1.99
CTK3YML112W RER1P25560 188 aa2.64□□□□□ -1.99
CTK3YML112W YCR022CP25620 114 aa2.64□□□□□ -1.99
CTK3YML112W PWP2P25635 923 aaKnown RBP2.64□□□□□ -1.99
CTK3YML112W YBR144CP34215 104 aa2.64□□□□□ -1.99
CTK3YML112W VPS24P36095 224 aaKnown RBP2.64□□□□□ -1.99
CTK3YML112W AFG3P39925 761 aa2.64□□□□□ -1.99
CTK3YML112W DSD1P53095 428 aa2.64□□□□□ -1.99
CTK3YML112W YML131WQ03102 365 aa2.64□□□□□ -1.99
CTK3YML112W YMR018WQ04364 514 aa2.64□□□□□ -1.99
CTK3YML112W BNA5Q05979 453 aa2.64□□□□□ -1.99
CTK3YML112W YPL272CQ08984 517 aa2.64□□□□□ -1.99
CTK3YML112W NCE102Q12207 173 aaRIP-Chip data2.64□□□□□ -1.99not detected
CTK3YML112W YDL009CQ12210 107 aa2.64□□□□□ -1.99
CTK3YML112W MF(ALPHA)1P01149 165 aa2.63□□□□□ -1.99
CTK3YML112W SGF29P25554 259 aa2.63□□□□□ -1.99
CTK3YML112W SSE2P32590 693 aaKnown RBP2.63□□□□□ -1.99
CTK3YML112W PMU1P36069 295 aa2.63□□□□□ -1.99
CTK3YML112W TUL1P36096 758 aa2.63□□□□□ -1.99
CTK3YML112W SHO1P40073 367 aa2.63□□□□□ -1.99
CTK3YML112W SCD6P45978 349 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99 RIP-Chip
CTK3YML112W YGL242CP53066 181 aa2.63□□□□□ -1.99
CTK3YML112W YGR126WP53274 230 aa2.63□□□□□ -1.99
CTK3YML112W YSA1Q01976 231 aa2.63□□□□□ -1.99
CTK3YML112W SLD5Q03406 294 aa2.63□□□□□ -1.99
CTK3YML112W BUD22Q04347 519 aaKnown RBP2.63□□□□□ -1.99
CTK3YML112W MRPL51Q06090 140 aaPredicted RBP2.63□□□□□ -1.99
CTK3YML112W YDL057WQ07379 328 aa2.63□□□□□ -1.99
CTK3YML112W LUC7Q07508 261 aaPredicted RBP2.63□□□□□ -1.99
CTK3YML112W ATR1P13090 542 aa2.62□□□□□ -1.99
CTK3YML112W SWH1P35845 1188 aa2.62□□□□□ -1.99
CTK3YML112W UBP11P36026 717 aa2.62□□□□□ -1.99
CTK3YML112W YBL029WP38201 376 aa2.62□□□□□ -1.99
CTK3YML112W DPH1P40487 425 aaKnown RBP2.62□□□□□ -1.99
CTK3YML112W MKT1P40850 830 aaKnown RBP2.62□□□□□ -1.99
CTK3YML112W APT1P49435 187 aaKnown RBP2.62□□□□□ -1.99
CTK3YML112W SHE10P53075 577 aa2.62□□□□□ -1.99
CTK3YML112W PMR1P13586 950 aa2.61□□□□□ -1.99
CTK3YML112W YCK1P23291 538 aa2.61□□□□□ -1.99
CTK3YML112W YIH1P25637 258 aa2.61□□□□□ -1.99
CTK3YML112W FRE1P32791 686 aa2.61□□□□□ -1.99
CTK3YML112W YHR210CP38893 341 aa2.61□□□□□ -1.99
CTK3YML112W CIN4P39110 191 aa2.61□□□□□ -1.99
CTK3YML112W ALG8P40351 577 aa2.61□□□□□ -1.99
CTK3YML112W YJR154WP47181 346 aa2.61□□□□□ -1.99
CTK3YML112W DRN1P53255 507 aaKnown RBP2.61□□□□□ -1.99
CTK3YML112W WSC2P53832 503 aa2.61□□□□□ -1.99
CTK3YML112W IRC15Q02733 499 aa2.61□□□□□ -1.99
CTK3YML112W ADD37Q03233 198 aa2.61□□□□□ -1.99
CTK3YML112W VPS74Q06385 345 aa2.61□□□□□ -1.99
CTK3YML112W SSP2Q08646 371 aa2.61□□□□□ -1.99
CTK3YML112W HNT3Q08702 217 aa2.61□□□□□ -1.99
CTK3YML112W YOR365CQ08844 703 aa2.61□□□□□ -1.99
CTK3YML112W YCL021W-AQ96VH3 125 aa2.61□□□□□ -1.99
CTK3YML112W SUC2P00724 532 aa2.6□□□□□ -1.99
CTK3YML112W RAD52P06778 471 aaKnown RBP2.6□□□□□ -1.99
CTK3YML112W RPL19AP0CX82 189 aaKnown RBP2.6□□□□□ -1.99
CTK3YML112W RPL19BP0CX83 189 aaPredicted RBP2.6□□□□□ -1.99
CTK3YML112W KAR3P17119 729 aa2.6□□□□□ -1.99
CTK3YML112W LDB16P25587 256 aa2.6□□□□□ -1.99
CTK3YML112W POL4P25615 582 aa2.6□□□□□ -1.99
CTK3YML112W TIF3P34167 436 aaKnown RBP2.6□□□□□ -1.99
CTK3YML112W MRPL4P36517 319 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms