RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W ENT4Q07872 247 aa1.26□□□□□ -2.21
SMC1YFL008W MIS1P09440 975 aaKnown RBP1.25□□□□□ -2.21
SMC1YFL008W MCM10P32354 571 aa1.25□□□□□ -2.21
SMC1YFL008W RFC3P38629 340 aa1.25□□□□□ -2.21
SMC1YFL008W ANS1P38832 159 aa1.25□□□□□ -2.21
SMC1YFL008W MTG2P38860 518 aa1.25□□□□□ -2.21
SMC1YFL008W MET30P39014 640 aa1.25□□□□□ -2.21
SMC1YFL008W RGI2P40188 164 aa1.25□□□□□ -2.21
SMC1YFL008W MDV1P47025 714 aa1.25□□□□□ -2.21
SMC1YFL008W SGM1P47166 707 aa1.25□□□□□ -2.21
SMC1YFL008W EFM6P53970 246 aa1.25□□□□□ -2.21
SMC1YFL008W ERG13P54839 491 aaKnown RBP1.25□□□□□ -2.21
SMC1YFL008W ATG16Q03818 150 aa1.25□□□□□ -2.21
SMC1YFL008W DIC1Q06143 298 aa1.25□□□□□ -2.21
SMC1YFL008W YER078W-AQ3E7A2 54 aa1.25□□□□□ -2.21
SMC1YFL008W MGR1P25573 417 aa1.25□□□□□ -2.21
SMC1YFL008W ITR1P30605 584 aa1.25□□□□□ -2.21
SMC1YFL008W ALY1P36117 915 aa1.25□□□□□ -2.21
SMC1YFL008W PSY4P38193 441 aa1.25□□□□□ -2.21
SMC1YFL008W MSH1P25846 959 aa1.25□□□□□ -2.21
SMC1YFL008W ERG1P32476 496 aaKnown RBP1.25□□□□□ -2.21
SMC1YFL008W SWE1P32944 819 aa1.25□□□□□ -2.21
SMC1YFL008W WBP1P33767 430 aaKnown RBP1.25□□□□□ -2.21
SMC1YFL008W YPK3P38070 525 aa1.25□□□□□ -2.21
SMC1YFL008W NPR2P39923 615 aa1.25□□□□□ -2.21
SMC1YFL008W ASE1P50275 885 aa1.25□□□□□ -2.21
SMC1YFL008W SGF73P53165 657 aa1.25□□□□□ -2.21
SMC1YFL008W YPL108WQ02872 168 aaPredicted RBP1.25□□□□□ -2.21
SMC1YFL008W MRPL1Q04599 285 aa1.25□□□□□ -2.21
SMC1YFL008W NKP1Q12493 238 aa1.25□□□□□ -2.21
SMC1YFL008W RSF2P46974 1380 aa1.25□□□□□ -2.21
SMC1YFL008W FUM1P08417 488 aaKnown RBP1.24□□□□□ -2.21
SMC1YFL008W GRX7P38068 203 aa1.24□□□□□ -2.21
SMC1YFL008W PCA1P38360 1216 aa1.24□□□□□ -2.21
SMC1YFL008W RTS1P38903 757 aa1.24□□□□□ -2.21
SMC1YFL008W YJL070CP40361 888 aa1.24□□□□□ -2.21
SMC1YFL008W BUD32P53323 261 aa1.24□□□□□ -2.21
SMC1YFL008W YMR178WQ03219 274 aaKnown RBP1.24□□□□□ -2.21
SMC1YFL008W BUD7Q08754 746 aa1.24□□□□□ -2.21
SMC1YFL008W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
SMC1YFL008W INP53Q12271 1107 aa1.24□□□□□ -2.21
SMC1YFL008W HEM2P05373 342 aa1.24□□□□□ -2.21
SMC1YFL008W SPO16P17122 198 aa1.24□□□□□ -2.21
SMC1YFL008W YCK1P23291 538 aa1.24□□□□□ -2.21
SMC1YFL008W YIM1P28625 365 aa1.24□□□□□ -2.21
SMC1YFL008W NIP1P32497 812 aaKnown RBP1.24□□□□□ -2.21
SMC1YFL008W PDR3P33200 976 aa1.24□□□□□ -2.21
SMC1YFL008W DIA4P38705 446 aaPredicted RBP1.24□□□□□ -2.21
SMC1YFL008W HAT2P39984 401 aa1.24□□□□□ -2.21
SMC1YFL008W MET28P40573 187 aa1.24□□□□□ -2.21
SMC1YFL008W TRS85P46944 698 aa1.24□□□□□ -2.21
SMC1YFL008W DPB11P47027 764 aaPredicted RBP1.24□□□□□ -2.21
SMC1YFL008W ZAP1P47043 880 aa1.24□□□□□ -2.21
SMC1YFL008W DCP2P53550 970 aaKnown RBP1.24□□□□□ -2.21
SMC1YFL008W YPL071CQ02864 156 aa1.24□□□□□ -2.21
SMC1YFL008W ERP1Q05359 219 aaKnown RBP1.24□□□□□ -2.21
SMC1YFL008W POS5Q06892 414 aa1.24□□□□□ -2.21
SMC1YFL008W NRT1Q08485 598 aa1.24□□□□□ -2.21
SMC1YFL008W TRX2P22803 104 aaKnown RBP1.24□□□□□ -2.21
SMC1YFL008W BUD5P25300 642 aaPredicted RBP1.24□□□□□ -2.21
SMC1YFL008W SIP2P34164 415 aaKnown RBP1.24□□□□□ -2.21
SMC1YFL008W GCS1P35197 352 aa1.24□□□□□ -2.21
SMC1YFL008W CAB3P36076 571 aa1.24□□□□□ -2.21
SMC1YFL008W NOP16P40007 231 aaKnown RBP1.24□□□□□ -2.21
SMC1YFL008W JHD1P40034 492 aa1.24□□□□□ -2.21
SMC1YFL008W YIL169CP40442 995 aa1.24□□□□□ -2.21
SMC1YFL008W ARC1P46672 376 aaKnown RBP1.24□□□□□ -2.21
SMC1YFL008W YVH1Q02256 364 aaKnown RBP1.24□□□□□ -2.21
SMC1YFL008W PDH1Q12428 516 aaKnown RBP1.24□□□□□ -2.21
SMC1YFL008W GRX6Q12438 231 aa1.24□□□□□ -2.21
SMC1YFL008W ARD1P07347 238 aaPredicted RBP1.23□□□□□ -2.21
SMC1YFL008W CDC16P09798 840 aa1.23□□□□□ -2.21
SMC1YFL008W GLN3P18494 730 aa1.23□□□□□ -2.21
SMC1YFL008W SEC66P33754 206 aa1.23□□□□□ -2.21
SMC1YFL008W FMP46P36141 133 aaKnown RBP1.23□□□□□ -2.21
SMC1YFL008W YBR137WP38276 179 aa1.23□□□□□ -2.21
SMC1YFL008W YAP3P38749 330 aa1.23□□□□□ -2.21
SMC1YFL008W YHR210CP38893 341 aa1.23□□□□□ -2.21
SMC1YFL008W YIR014WP40570 242 aa1.23□□□□□ -2.21
SMC1YFL008W ART5P53244 586 aaKnown RBP1.23□□□□□ -2.21
SMC1YFL008W LSC1P53598 329 aaKnown RBP1.23□□□□□ -2.21
SMC1YFL008W COS1P53822 381 aa1.23□□□□□ -2.21
SMC1YFL008W YNL058CP53947 316 aa1.23□□□□□ -2.21
SMC1YFL008W TSA2Q04120 196 aa1.23□□□□□ -2.21
SMC1YFL008W RSF1Q05043 376 aa1.23□□□□□ -2.21
SMC1YFL008W ECM22Q05958 814 aaPredicted RBP1.23□□□□□ -2.21
SMC1YFL008W SNA4Q07549 140 aa1.23□□□□□ -2.21
SMC1YFL008W DSE3Q08729 430 aa1.23□□□□□ -2.21
SMC1YFL008W ROM2P51862 1356 aaKnown RBP1.23□□□□□ -2.21
SMC1YFL008W ILS1P09436 1072 aaKnown RBP1.23□□□□□ -2.21
SMC1YFL008W MRP13P12686 339 aa1.23□□□□□ -2.21
SMC1YFL008W SMK1P41808 388 aa1.23□□□□□ -2.21
SMC1YFL008W MRX6P48564 524 aa1.23□□□□□ -2.21
SMC1YFL008W SCS3P53012 380 aa1.23□□□□□ -2.21
SMC1YFL008W JJJ1P53863 590 aa1.23□□□□□ -2.21
SMC1YFL008W BLS1Q06071 122 aa1.23□□□□□ -2.21
SMC1YFL008W SYO1Q07395 620 aa1.23□□□□□ -2.21
SMC1YFL008W AYT1Q12226 474 aa1.23□□□□□ -2.21
SMC1YFL008W RRI2Q12348 645 aa1.23□□□□□ -2.21
SMC1YFL008W CHS1P08004 1131 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms