RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN3	YER021W	YFL068W	P0CX99	160 aa		3.12	□□□□□ -1.91
RPN3	YER021W	YLL066W-A	P0CY00	160 aa		3.12	□□□□□ -1.91
RPN3	YER021W	YLL067W-A	P0CY01	160 aa		3.12	□□□□□ -1.91
RPN3	YER021W	MCM10	P32354	571 aa		3.12	□□□□□ -1.91
RPN3	YER021W	RGT1	P32862	1170 aa		3.12	□□□□□ -1.91
RPN3	YER021W	MNN2	P38069	597 aa		3.12	□□□□□ -1.91
RPN3	YER021W	KTR3	P38130	404 aa	Predicted RBP	3.12	□□□□□ -1.91
RPN3	YER021W	HXT9	P40885	567 aa		3.12	□□□□□ -1.91
RPN3	YER021W	DPB11	P47027	764 aa	Predicted RBP	3.12	□□□□□ -1.91
RPN3	YER021W	AAD10	P47182	288 aa		3.12	□□□□□ -1.91
RPN3	YER021W	ART5	P53244	586 aa	Known RBP	3.12	□□□□□ -1.91
RPN3	YER021W	BOP3	P53958	396 aa		3.12	□□□□□ -1.91
RPN3	YER021W	ARP9	Q05123	467 aa		3.12	□□□□□ -1.91
RPN3	YER021W	YMR034C	Q05131	434 aa	Predicted RBP	3.12	□□□□□ -1.91
RPN3	YER021W	SKG3	Q06315	1026 aa		3.12	□□□□□ -1.91
RPN3	YER021W	OPY2	Q06810	360 aa		3.12	□□□□□ -1.91
RPN3	YER021W	SNA4	Q07549	140 aa		3.12	□□□□□ -1.91
RPN3	YER021W	ENT4	Q07872	247 aa		3.12	□□□□□ -1.91
RPN3	YER021W	NBP2	Q12163	236 aa		3.12	□□□□□ -1.91
RPN3	YER021W	RFC1	P38630	861 aa	Known RBP	3.12	□□□□□ -1.91
RPN3	YER021W	PCL6	P40038	420 aa		3.12	□□□□□ -1.91
RPN3	YER021W	RTR1	P40084	226 aa	Predicted RBP	3.12	□□□□□ -1.91
RPN3	YER021W	SGF73	P53165	657 aa		3.12	□□□□□ -1.91
RPN3	YER021W	SVL3	Q03088	825 aa	Known RBP	3.12	□□□□□ -1.91
RPN3	YER021W	VIP1	Q06685	1146 aa	Known RBP	3.12	□□□□□ -1.91
RPN3	YER021W	SRL1	Q08673	210 aa		3.12	□□□□□ -1.91
RPN3	YER021W	INP53	Q12271	1107 aa		3.12	□□□□□ -1.91
RPN3	YER021W	YDR524C-B	Q3E6R4	66 aa		3.12	□□□□□ -1.91
RPN3	YER021W	TOR2	P32600	2474 aa	Known RBP	3.12	□□□□□ -1.91
RPN3	YER021W	KRS1	P15180	591 aa	Known RBP	3.11	□□□□□ -1.91
RPN3	YER021W	SNU114	P36048	1008 aa	Known RBP	3.11	□□□□□ -1.91
RPN3	YER021W	YBL028C	P38202	106 aa		3.11	□□□□□ -1.91
RPN3	YER021W	ARC40	P38328	384 aa	Known RBP	3.11	□□□□□ -1.91
RPN3	YER021W	VID27	P40157	782 aa		3.11	□□□□□ -1.91
RPN3	YER021W	YFH7	P43591	353 aa		3.11	□□□□□ -1.91
RPN3	YER021W	NNF2	P53253	936 aa		3.11	□□□□□ -1.91
RPN3	YER021W	BSC5	P53755	489 aa		3.11	□□□□□ -1.91
RPN3	YER021W	ESBP6	P53918	673 aa		3.11	□□□□□ -1.91
RPN3	YER021W	YMR018W	Q04364	514 aa		3.11	□□□□□ -1.91
RPN3	YER021W	ARP10	Q04549	284 aa		3.11	□□□□□ -1.91
RPN3	YER021W	ECI1	Q05871	280 aa		3.11	□□□□□ -1.91
RPN3	YER021W	UTP21	Q06078	939 aa	Predicted RBP	3.11	□□□□□ -1.91
RPN3	YER021W	MCP2	Q06567	569 aa		3.11	□□□□□ -1.91
RPN3	YER021W	MOT1	P32333	1867 aa		3.1	□□□□□ -1.91
RPN3	YER021W	VMA2	P16140	517 aa	Known RBP	3.1	□□□□□ -1.91
RPN3	YER021W	YCR043C	P25361	127 aa		3.1	□□□□□ -1.91
RPN3	YER021W	PDB1	P32473	366 aa	Known RBP	3.1	□□□□□ -1.91
RPN3	YER021W	ARP1	P38696	384 aa		3.1	□□□□□ -1.91
RPN3	YER021W	YNG2	P38806	282 aa	Known RBP	3.1	□□□□□ -1.91
RPN3	YER021W	UIP3	P39547	235 aa		3.1	□□□□□ -1.91
RPN3	YER021W	VRG4	P40107	337 aa		3.1	□□□□□ -1.91
RPN3	YER021W	ARC1	P46672	376 aa	Known RBP	3.1	□□□□□ -1.91
RPN3	YER021W	MPP10	P47083	593 aa	Known RBP	3.1	□□□□□ -1.91
RPN3	YER021W	RPS7B	P48164	190 aa	Known RBP	3.1	□□□□□ -1.91
RPN3	YER021W	YSA1	Q01976	231 aa		3.1	□□□□□ -1.91
RPN3	YER021W	YMR178W	Q03219	274 aa	Known RBP	3.1	□□□□□ -1.91
RPN3	YER021W	RAD30	Q04049	632 aa		3.1	□□□□□ -1.91
RPN3	YER021W	RPL19A	P0CX82	189 aa	Known RBP	3.09	□□□□□ -1.91
RPN3	YER021W	RPL19B	P0CX83	189 aa	Predicted RBP	3.09	□□□□□ -1.91
RPN3	YER021W	CDC24	P11433	854 aa	Predicted RBP	3.09	□□□□□ -1.91
RPN3	YER021W	PWP1	P21304	576 aa	Known RBP	3.09	□□□□□ -1.91
RPN3	YER021W	MIA40	P36046	403 aa		3.09	□□□□□ -1.91
RPN3	YER021W	NUP133	P36161	1157 aa		3.09	□□□□□ -1.91
RPN3	YER021W	DIA4	P38705	446 aa	Predicted RBP	3.09	□□□□□ -1.91
RPN3	YER021W	NOC2	P39744	710 aa	Known RBP	3.09	□□□□□ -1.91
RPN3	YER021W	BUR6	P40096	142 aa		3.09	□□□□□ -1.91
RPN3	YER021W	YIL060W	P40519	144 aa		3.09	□□□□□ -1.91
RPN3	YER021W	TES1	P41903	349 aa	Known RBP	3.09	□□□□□ -1.91
RPN3	YER021W	SMC3	P47037	1230 aa		3.09	□□□□□ -1.91
RPN3	YER021W	YKU80	Q04437	629 aa		3.09	□□□□□ -1.91
RPN3	YER021W	ADE13	Q05911	482 aa	Known RBP	3.09	□□□□□ -1.91
RPN3	YER021W	PSR1	Q07800	427 aa		3.09	□□□□□ -1.91
RPN3	YER021W	BUD7	Q08754	746 aa		3.09	□□□□□ -1.91
RPN3	YER021W	SKM1	Q12469	655 aa		3.09	□□□□□ -1.91
RPN3	YER021W	MYO1	P08964	1928 aa		3.09	□□□□□ -1.92
RPN3	YER021W	PGS1	P25578	521 aa		3.08	□□□□□ -1.92
RPN3	YER021W	MUD2	P36084	527 aa	Known RBP	3.08	□□□□□ -1.92
RPN3	YER021W	EFM2	P38347	419 aa		3.08	□□□□□ -1.92
RPN3	YER021W	YEL068C	P39977	110 aa		3.08	□□□□□ -1.92
RPN3	YER021W	STR3	P53101	465 aa	Known RBP	3.08	□□□□□ -1.92
RPN3	YER021W	LSC1	P53598	329 aa	Known RBP	3.08	□□□□□ -1.92
RPN3	YER021W	YNL234W	P53857	426 aa		3.08	□□□□□ -1.92
RPN3	YER021W	YNL181W	P53878	407 aa		3.08	□□□□□ -1.92
RPN3	YER021W	BET4	Q00618	327 aa		3.08	□□□□□ -1.92
RPN3	YER021W	DIG1	Q03063	452 aa	Known RBP	3.08	□□□□□ -1.92
RPN3	YER021W	CTL1	Q03220	320 aa	Known RBP	3.08	□□□□□ -1.92
RPN3	YER021W	EKI1	Q03764	534 aa		3.08	□□□□□ -1.92
RPN3	YER021W	NUP53	Q03790	475 aa		3.08	□□□□□ -1.92
RPN3	YER021W	APL5	Q08951	932 aa	Known RBP	3.08	□□□□□ -1.92
RPN3	YER021W	CDC16	P09798	840 aa		3.08	□□□□□ -1.92
RPN3	YER021W	RPL40A	P0CH08	128 aa	Known RBP	3.08	□□□□□ -1.92
RPN3	YER021W	RPL40B	P0CH09	128 aa	Known RBP	3.08	□□□□□ -1.92
RPN3	YER021W	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
RPN3	YER021W	GAC1	P28006	793 aa		3.08	□□□□□ -1.92
RPN3	YER021W	PDR3	P33200	976 aa		3.08	□□□□□ -1.92
RPN3	YER021W	YKL050C	P35736	922 aa		3.08	□□□□□ -1.92
RPN3	YER021W	ANS1	P38832	159 aa		3.08	□□□□□ -1.92
RPN3	YER021W	RTS1	P38903	757 aa		3.08	□□□□□ -1.92
RPN3	YER021W	MET30	P39014	640 aa		3.08	□□□□□ -1.92
RPN3	YER021W	YIL169C	P40442	995 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms