RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W QNS1P38795 714 aaKnown RBP5.7□□□□□ -1.5
VMS1YDR049W SEC31P38968 1273 aaKnown RBP5.7□□□□□ -1.5
VMS1YDR049W SUR2P38992 349 aa5.7□□□□□ -1.5
VMS1YDR049W CEP3P40969 608 aa5.7□□□□□ -1.5
VMS1YDR049W BNA6P43619 295 aa5.7□□□□□ -1.5
VMS1YDR049W YJL132WP47014 750 aa5.7□□□□□ -1.5
VMS1YDR049W MTC3P53077 123 aa5.7□□□□□ -1.5
VMS1YDR049W YDR179W-AQ03983 463 aa5.7□□□□□ -1.5
VMS1YDR049W ARG7Q04728 441 aa5.7□□□□□ -1.5
VMS1YDR049W STE23Q06010 1027 aa5.7□□□□□ -1.5
VMS1YDR049W YPL272CQ08984 517 aa5.7□□□□□ -1.5
VMS1YDR049W PUS9Q12069 462 aa5.7□□□□□ -1.5
VMS1YDR049W SEC3P33332 1336 aaKnown RBP5.69□□□□□ -1.5
VMS1YDR049W YAK1P14680 807 aa5.69□□□□□ -1.5
VMS1YDR049W SPE2P21182 396 aa5.69□□□□□ -1.5
VMS1YDR049W MRPL10P36520 322 aa5.69□□□□□ -1.5
VMS1YDR049W MAL32P38158 584 aa5.69□□□□□ -1.5
VMS1YDR049W AKR1P39010 764 aa5.69□□□□□ -1.5
VMS1YDR049W RCY1P39531 840 aa5.69□□□□□ -1.5
VMS1YDR049W GLG2P47011 380 aa5.69□□□□□ -1.5
VMS1YDR049W BRO1P48582 844 aa5.69□□□□□ -1.5
VMS1YDR049W DRN1P53255 507 aaKnown RBP5.69□□□□□ -1.5
VMS1YDR049W MAL12P53341 584 aa5.69□□□□□ -1.5
VMS1YDR049W SLT2Q00772 484 aa5.69□□□□□ -1.5
VMS1YDR049W BNA7Q04066 261 aa5.69□□□□□ -1.5
VMS1YDR049W SPC2Q04969 178 aa5.69□□□□□ -1.5
VMS1YDR049W SOG2Q08817 791 aa5.69□□□□□ -1.5
VMS1YDR049W AEP3Q12089 606 aa5.69□□□□□ -1.5
VMS1YDR049W TY1A-DR3Q12441 440 aa5.69□□□□□ -1.5
VMS1YDR049W SIP1P32578 815 aa5.68□□□□□ -1.5
VMS1YDR049W POP7P38291 140 aa5.68□□□□□ -1.5
VMS1YDR049W RTC3P38804 111 aaPredicted RBP5.68□□□□□ -1.5
VMS1YDR049W EGD2P38879 174 aaKnown RBP5.68□□□□□ -1.5
VMS1YDR049W VFA1P40080 203 aa5.68□□□□□ -1.5
VMS1YDR049W YJL107CP42947 387 aa5.68□□□□□ -1.5
VMS1YDR049W YGR149WP48236 432 aa5.68□□□□□ -1.5
VMS1YDR049W YGL114WP53134 725 aa5.68□□□□□ -1.5
VMS1YDR049W ADE12P80210 433 aaKnown RBP5.68□□□□□ -1.5
VMS1YDR049W TRS31Q03337 283 aa5.68□□□□□ -1.5
VMS1YDR049W ACL4Q03771 387 aa5.68□□□□□ -1.5
VMS1YDR049W AIM6Q07716 390 aa5.68□□□□□ -1.5
VMS1YDR049W RPL24AP04449 155 aaKnown RBP5.68□□□□□ -1.5
VMS1YDR049W MET3P08536 511 aa5.68□□□□□ -1.5
VMS1YDR049W SCH9P11792 824 aaKnown RBP5.68□□□□□ -1.5
VMS1YDR049W GAL3P13045 520 aa5.68□□□□□ -1.5
VMS1YDR049W SPO7P18410 259 aa5.68□□□□□ -1.5
VMS1YDR049W UTR1P21373 530 aa5.68□□□□□ -1.5
VMS1YDR049W PEX1P24004 1043 aa5.68□□□□□ -1.5
VMS1YDR049W SSE2P32590 693 aaKnown RBP5.68□□□□□ -1.5
VMS1YDR049W MTC7P32633 139 aa5.68□□□□□ -1.5
VMS1YDR049W WBP1P33767 430 aaKnown RBP5.68□□□□□ -1.5
VMS1YDR049W END3P39013 349 aa5.68□□□□□ -1.5
VMS1YDR049W NMD5P46970 1048 aa5.68□□□□□ -1.5
VMS1YDR049W TAH11P47112 604 aa5.68□□□□□ -1.5
VMS1YDR049W MPS2P53159 387 aa5.68□□□□□ -1.5
VMS1YDR049W DUS1P53759 423 aaKnown RBP5.68□□□□□ -1.5
VMS1YDR049W RCR2Q03446 210 aaKnown RBP5.68□□□□□ -1.5
VMS1YDR049W MUS81Q04149 632 aaPredicted RBP5.68□□□□□ -1.5
VMS1YDR049W PDS5Q04264 1277 aa5.68□□□□□ -1.5
VMS1YDR049W BUD22Q04347 519 aaKnown RBP5.68□□□□□ -1.5
VMS1YDR049W GMC2Q06201 188 aa5.68□□□□□ -1.5
VMS1YDR049W ECM30Q06673 1274 aa5.68□□□□□ -1.5
VMS1YDR049W RDR1Q08904 546 aa5.68□□□□□ -1.5
VMS1YDR049W SRO7Q12038 1033 aa5.68□□□□□ -1.5
VMS1YDR049W SOD2P00447 233 aa5.67□□□□□ -1.5
VMS1YDR049W TCP1P12612 559 aaKnown RBP5.67□□□□□ -1.5
VMS1YDR049W KIN2P13186 1147 aaKnown RBP5.67□□□□□ -1.5
VMS1YDR049W SEC63P14906 663 aa5.67□□□□□ -1.5
VMS1YDR049W SAG1P20840 650 aa5.67□□□□□ -1.5
VMS1YDR049W KGD1P20967 1014 aaKnown RBP5.67□□□□□ -1.5
VMS1YDR049W SEC62P21825 274 aa5.67□□□□□ -1.5
VMS1YDR049W RPS7AP26786 190 aaKnown RBP5.67□□□□□ -1.5
VMS1YDR049W IDH2P28241 369 aaKnown RBP5.67□□□□□ -1.5
VMS1YDR049W BMH1P29311 267 aaKnown RBP5.67□□□□□ -1.5
VMS1YDR049W PET127P32606 800 aa5.67□□□□□ -1.5
VMS1YDR049W UBC6P33296 250 aaPredicted RBP5.67□□□□□ -1.5
VMS1YDR049W TAT1P38085 619 aa5.67□□□□□ -1.5
VMS1YDR049W SWC5P38326 303 aa5.67□□□□□ -1.5
VMS1YDR049W RTT107P38850 1070 aa5.67□□□□□ -1.5
VMS1YDR049W FKH2P41813 862 aa5.67□□□□□ -1.5
VMS1YDR049W MAF1P41910 395 aa5.67□□□□□ -1.5
VMS1YDR049W YHC3P47040 408 aa5.67□□□□□ -1.5
VMS1YDR049W CTR1P49573 406 aa5.67□□□□□ -1.5
VMS1YDR049W TAM41P53230 385 aa5.67□□□□□ -1.5
VMS1YDR049W RRG8Q06109 277 aa5.67□□□□□ -1.5
VMS1YDR049W NOP12Q08208 459 aaKnown RBP5.67□□□□□ -1.5
VMS1YDR049W NRT1Q08485 598 aa5.67□□□□□ -1.5
VMS1YDR049W ECM5Q03214 1411 aa5.67□□□□□ -1.5
VMS1YDR049W RNR1P21524 888 aaKnown RBP5.66□□□□□ -1.5
VMS1YDR049W DPB2P24482 689 aaPredicted RBP5.66□□□□□ -1.5
VMS1YDR049W YIH1P25637 258 aa5.66□□□□□ -1.5
VMS1YDR049W ICL1P28240 557 aaPredicted RBP5.66□□□□□ -1.5
VMS1YDR049W RAD14P28519 371 aa5.66□□□□□ -1.5
VMS1YDR049W PRO3P32263 286 aaKnown RBP5.66□□□□□ -1.5
VMS1YDR049W SPR1P32603 445 aa5.66□□□□□ -1.5
VMS1YDR049W APN2P38207 520 aa5.66□□□□□ -1.5
VMS1YDR049W RPN3P40016 523 aaKnown RBP5.66□□□□□ -1.5
VMS1YDR049W PCL6P40038 420 aa5.66□□□□□ -1.5
VMS1YDR049W SNZ3P43545 298 aa5.66□□□□□ -1.5
VMS1YDR049W YFL054CP43549 646 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms