RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	ARG81	P05085	880 aa		1.53	□□□□□ -2.16
HMRA2	YCR096C	MTF2	P10849	440 aa		1.53	□□□□□ -2.16
HMRA2	YCR096C	AMD1	P15274	810 aa	Known RBP	1.53	□□□□□ -2.16
HMRA2	YCR096C	UBC1	P21734	215 aa	Known RBP	1.53	□□□□□ -2.16
HMRA2	YCR096C	SGV1	P23293	657 aa	Known RBP	1.53	□□□□□ -2.16
HMRA2	YCR096C	RVS161	P25343	265 aa	Known RBP	1.53	□□□□□ -2.16
HMRA2	YCR096C	ARO2	P28777	376 aa	Known RBP	1.53	□□□□□ -2.16
HMRA2	YCR096C	HCS1	P34243	683 aa		1.53	□□□□□ -2.16
HMRA2	YCR096C	DBP8	P38719	431 aa		1.53	□□□□□ -2.16
HMRA2	YCR096C	FMP10	P40098	244 aa		1.53	□□□□□ -2.16
HMRA2	YCR096C	SEC24	P40482	926 aa	Known RBP	1.53	□□□□□ -2.16
HMRA2	YCR096C	PYK2	P52489	506 aa	Known RBP	1.53	□□□□□ -2.16
HMRA2	YCR096C	DUG3	P53871	357 aa		1.53	□□□□□ -2.16
HMRA2	YCR096C	TRM8	Q12009	286 aa		1.53	□□□□□ -2.16
HMRA2	YCR096C	ERG27	Q12452	347 aa	Known RBP	1.53	□□□□□ -2.16
HMRA2	YCR096C	PUT2	P07275	575 aa		1.52	□□□□□ -2.17
HMRA2	YCR096C	RAD16	P31244	790 aa		1.52	□□□□□ -2.17
HMRA2	YCR096C	DBF20	P32328	564 aa		1.52	□□□□□ -2.17
HMRA2	YCR096C	MRP4	P32902	394 aa		1.52	□□□□□ -2.17
HMRA2	YCR096C	MID2	P36027	376 aa		1.52	□□□□□ -2.17
HMRA2	YCR096C	TIF4631	P39935	952 aa	Known RBP	1.52	□□□□□ -2.17
HMRA2	YCR096C	BUR6	P40096	142 aa		1.52	□□□□□ -2.17
HMRA2	YCR096C	YFL067W	P43537	175 aa		1.52	□□□□□ -2.17
HMRA2	YCR096C	UBX4	P54730	416 aa		1.52	□□□□□ -2.17
HMRA2	YCR096C	RHO4	Q00246	291 aa		1.52	□□□□□ -2.17
HMRA2	YCR096C	RSM23	Q01163	450 aa		1.52	□□□□□ -2.17
HMRA2	YCR096C	MRPL13	Q02204	264 aa		1.52	□□□□□ -2.17
HMRA2	YCR096C	YMR027W	Q04371	470 aa		1.52	□□□□□ -2.17
HMRA2	YCR096C	YDL009C	Q12210	107 aa		1.52	□□□□□ -2.17
HMRA2	YCR096C	CCH1	P50077	2039 aa		1.52	□□□□□ -2.17
HMRA2	YCR096C	CDC60	P26637	1090 aa	Known RBP	1.51	□□□□□ -2.17
HMRA2	YCR096C	FRE1	P32791	686 aa		1.51	□□□□□ -2.17
HMRA2	YCR096C	BMT2	P38278	337 aa		1.51	□□□□□ -2.17
HMRA2	YCR096C	NPR3	P38742	1146 aa		1.51	□□□□□ -2.17
HMRA2	YCR096C	REE1	P40893	198 aa		1.51	□□□□□ -2.17
HMRA2	YCR096C	IME4	P41833	600 aa		1.51	□□□□□ -2.17
HMRA2	YCR096C	RRN11	Q04712	507 aa		1.51	□□□□□ -2.17
HMRA2	YCR096C	SNF1	P06782	633 aa	Known RBP	1.5	□□□□□ -2.17
HMRA2	YCR096C	LPD1	P09624	499 aa	Known RBP	1.5	□□□□□ -2.17
HMRA2	YCR096C	MRP20	P32387	263 aa		1.5	□□□□□ -2.17
HMRA2	YCR096C	SNU114	P36048	1008 aa	Known RBP	1.5	□□□□□ -2.17
HMRA2	YCR096C	AXL2	P38928	823 aa		1.5	□□□□□ -2.17
HMRA2	YCR096C	HAT2	P39984	401 aa		1.5	□□□□□ -2.17
HMRA2	YCR096C	IST3	P40565	148 aa	Predicted RBP	1.5	□□□□□ -2.17
HMRA2	YCR096C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	1.5	□□□□□ -2.17	not detected
HMRA2	YCR096C	RPS7B	P48164	190 aa	Known RBP	1.5	□□□□□ -2.17
HMRA2	YCR096C	BUD32	P53323	261 aa		1.5	□□□□□ -2.17
HMRA2	YCR096C	GTR1	Q00582	310 aa		1.5	□□□□□ -2.17
HMRA2	YCR096C	BLS1	Q06071	122 aa		1.5	□□□□□ -2.17
HMRA2	YCR096C	MRPL51	Q06090	140 aa	Predicted RBP	1.5	□□□□□ -2.17
HMRA2	YCR096C	RTT109	Q07794	436 aa		1.5	□□□□□ -2.17
HMRA2	YCR096C	PAH1	P32567	862 aa		1.49	□□□□□ -2.17
HMRA2	YCR096C	TEF4	P36008	412 aa	Known RBP	1.49	□□□□□ -2.17
HMRA2	YCR096C	MRPL36	P36531	177 aa		1.49	□□□□□ -2.17
HMRA2	YCR096C	TSC10	P38342	320 aa		1.49	□□□□□ -2.17
HMRA2	YCR096C	YJR008W	P47085	338 aa		1.49	□□□□□ -2.17
HMRA2	YCR096C	PIL1	P53252	339 aa	Known RBP	1.49	□□□□□ -2.17
HMRA2	YCR096C	ZDS2	P54786	942 aa		1.49	□□□□□ -2.17
HMRA2	YCR096C	SNO4	Q04902	237 aa		1.49	□□□□□ -2.17
HMRA2	YCR096C	VID22	Q05934	901 aa		1.49	□□□□□ -2.17
HMRA2	YCR096C	HSP33	Q08914	237 aa	Known RBP	1.49	□□□□□ -2.17
HMRA2	YCR096C	HSP32	Q08992	237 aa		1.49	□□□□□ -2.17
HMRA2	YCR096C	YLR302C	O13544	120 aa		1.48	□□□□□ -2.17
HMRA2	YCR096C	RPB2	P08518	1224 aa	Known RBP	1.48	□□□□□ -2.17
HMRA2	YCR096C	ALY1	P36117	915 aa		1.48	□□□□□ -2.17
HMRA2	YCR096C	KTR3	P38130	404 aa	Predicted RBP	1.48	□□□□□ -2.17
HMRA2	YCR096C	LYS4	P49367	693 aa	Predicted RBP	1.48	□□□□□ -2.17
HMRA2	YCR096C	VPS4	P52917	437 aa		1.48	□□□□□ -2.17
HMRA2	YCR096C	SHR3	Q02774	210 aa		1.48	□□□□□ -2.17
HMRA2	YCR096C	TEN1	Q07921	160 aa		1.48	□□□□□ -2.17
HMRA2	YCR096C	YBR085C-A	O43137	85 aa		1.47	□□□□□ -2.17
HMRA2	YCR096C	CHS1	P08004	1131 aa		1.47	□□□□□ -2.17
HMRA2	YCR096C	SYN8	P31377	255 aa		1.47	□□□□□ -2.17
HMRA2	YCR096C	YKL097C	P34245	136 aa		1.47	□□□□□ -2.17
HMRA2	YCR096C	ELO1	P39540	310 aa		1.47	□□□□□ -2.17
HMRA2	YCR096C	IES5	P40060	125 aa		1.47	□□□□□ -2.17
HMRA2	YCR096C	RIC1	P40395	1056 aa		1.47	□□□□□ -2.17
HMRA2	YCR096C	ERG26	P53199	349 aa	Known RBP	1.47	□□□□□ -2.17
HMRA2	YCR096C	IRC15	Q02733	499 aa		1.47	□□□□□ -2.17
HMRA2	YCR096C	PIR3	Q03180	325 aa		1.47	□□□□□ -2.17
HMRA2	YCR096C	BNA5	Q05979	453 aa		1.47	□□□□□ -2.17
HMRA2	YCR096C	TSR1	Q07381	788 aa	Known RBP	1.47	□□□□□ -2.17
HMRA2	YCR096C	RIX7	Q07844	837 aa	Known RBP	1.47	□□□□□ -2.17
HMRA2	YCR096C	SDH5	Q08230	162 aa		1.47	□□□□□ -2.17
HMRA2	YCR096C	WTM1	Q12363	437 aa	Known RBP	1.47	□□□□□ -2.17
HMRA2	YCR096C	YBL111C	Q3E7Y5	667 aa		1.47	□□□□□ -2.17
HMRA2	YCR096C	HEM15	P16622	393 aa		1.46	□□□□□ -2.18
HMRA2	YCR096C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	1.46	□□□□□ -2.18	not detected
HMRA2	YCR096C	KGD1	P20967	1014 aa	Known RBP	1.46	□□□□□ -2.18
HMRA2	YCR096C	PWP1	P21304	576 aa	Known RBP	1.46	□□□□□ -2.18
HMRA2	YCR096C	CPR4	P25334	318 aa		1.46	□□□□□ -2.18
HMRA2	YCR096C	CNS1	P33313	385 aa		1.46	□□□□□ -2.18
HMRA2	YCR096C	PIM1	P36775	1133 aa		1.46	□□□□□ -2.18
HMRA2	YCR096C	PSY4	P38193	441 aa		1.46	□□□□□ -2.18
HMRA2	YCR096C	UIP3	P39547	235 aa		1.46	□□□□□ -2.18
HMRA2	YCR096C	YER010C	P40011	234 aa		1.46	□□□□□ -2.18
HMRA2	YCR096C	SLZ1	P40167	298 aa		1.46	□□□□□ -2.18
HMRA2	YCR096C	TMA108	P40462	946 aa		1.46	□□□□□ -2.18
HMRA2	YCR096C	SAP185	P40856	1058 aa		1.46	□□□□□ -2.18
HMRA2	YCR096C	SGM1	P47166	707 aa		1.46	□□□□□ -2.18

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms