RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W ISC10P32645 267 aa0.71□□□□□ -2.3
UTP20YBL004W YIL012WP40551 113 aa0.71□□□□□ -2.3
UTP20YBL004W YFL034WP43564 1073 aa0.71□□□□□ -2.3
UTP20YBL004W YJL132WP47014 750 aa0.71□□□□□ -2.3
UTP20YBL004W TCB2P48231 1178 aa0.71□□□□□ -2.3
UTP20YBL004W RNH70P53331 553 aa0.71□□□□□ -2.3
UTP20YBL004W CMS1Q07897 291 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W PUF2Q12221 1075 aaKnown RBP RIP-Chip data0.71□□□□□ -2.3 RIP-Chip
UTP20YBL004W HMG1P12683 1054 aa0.7□□□□□ -2.3
UTP20YBL004W ACO1P19414 778 aaKnown RBP RIP-Chip data0.7□□□□□ -2.3not detected
UTP20YBL004W DBP5P20449 482 aaKnown RBP0.7□□□□□ -2.3
UTP20YBL004W KAR9P32526 644 aa0.7□□□□□ -2.3
UTP20YBL004W FRE1P32791 686 aa0.7□□□□□ -2.3
UTP20YBL004W SHM1P37292 490 aaPredicted RBP0.7□□□□□ -2.3
UTP20YBL004W GLY1P37303 387 aaKnown RBP0.7□□□□□ -2.3
UTP20YBL004W AKR1P39010 764 aa0.7□□□□□ -2.3
UTP20YBL004W BUD32P53323 261 aa0.7□□□□□ -2.3
UTP20YBL004W RTC4P53850 401 aa0.7□□□□□ -2.3
UTP20YBL004W ORC1P54784 914 aaPredicted RBP0.7□□□□□ -2.3
UTP20YBL004W YMR111CQ04461 462 aaPredicted RBP0.7□□□□□ -2.3
UTP20YBL004W ROX1P25042 368 aa0.7□□□□□ -2.3
UTP20YBL004W YMC1P32331 307 aa0.7□□□□□ -2.3
UTP20YBL004W PBY1P38254 753 aa0.7□□□□□ -2.3
UTP20YBL004W CCT7P42943 550 aaKnown RBP0.7□□□□□ -2.3
UTP20YBL004W PRP24P49960 444 aaKnown RBP0.7□□□□□ -2.3
UTP20YBL004W MTD1Q02046 320 aaKnown RBP0.7□□□□□ -2.3
UTP20YBL004W SCW10Q04951 389 aa0.7□□□□□ -2.3
UTP20YBL004W TFB4Q12004 338 aa0.7□□□□□ -2.3
UTP20YBL004W MLH3Q12083 715 aa0.7□□□□□ -2.3
UTP20YBL004W TIP41Q12199 356 aa0.7□□□□□ -2.3
UTP20YBL004W RPS4AP0CX35 261 aaKnown RBP0.7□□□□□ -2.3
UTP20YBL004W RPS4BP0CX36 261 aaKnown RBP0.7□□□□□ -2.3
UTP20YBL004W SAT4P25333 603 aaKnown RBP0.7□□□□□ -2.3
UTP20YBL004W HSM3P38348 480 aa0.7□□□□□ -2.3
UTP20YBL004W YMR124WP39523 943 aaKnown RBP0.7□□□□□ -2.3
UTP20YBL004W SAE2P46946 345 aa0.7□□□□□ -2.3
UTP20YBL004W PRP38Q00723 242 aaPredicted RBP0.7□□□□□ -2.3
UTP20YBL004W PDS5Q04264 1277 aa0.7□□□□□ -2.3
UTP20YBL004W AGE1Q04412 482 aa0.7□□□□□ -2.3
UTP20YBL004W TAZ1Q06510 381 aa0.7□□□□□ -2.3
UTP20YBL004W DGR2P32330 852 aa0.7□□□□□ -2.3
UTP20YBL004W NDI1P32340 513 aa0.7□□□□□ -2.3
UTP20YBL004W GMH1P36125 273 aa0.7□□□□□ -2.3
UTP20YBL004W BNI5P53890 448 aaKnown RBP0.7□□□□□ -2.3
UTP20YBL004W HAS1Q03532 505 aaKnown RBP0.7□□□□□ -2.3
UTP20YBL004W LOT6Q07923 191 aa0.7□□□□□ -2.3
UTP20YBL004W CBS1P14066 229 aa0.7□□□□□ -2.3
UTP20YBL004W HOP1P20050 605 aa0.7□□□□□ -2.3
UTP20YBL004W PTC6P25646 442 aa0.7□□□□□ -2.3
UTP20YBL004W ARC19P33204 171 aaKnown RBP0.7□□□□□ -2.3
UTP20YBL004W ECM14P38836 430 aa0.7□□□□□ -2.3
UTP20YBL004W SLI1P53304 468 aa0.7□□□□□ -2.3
UTP20YBL004W PIR1Q03178 341 aa0.7□□□□□ -2.3
UTP20YBL004W VPS71Q03433 280 aa0.7□□□□□ -2.3
UTP20YBL004W SXM1Q04175 944 aaKnown RBP0.7□□□□□ -2.3
UTP20YBL004W YLR283WQ05867 314 aa0.7□□□□□ -2.3
UTP20YBL004W RSC3Q06639 885 aa0.7□□□□□ -2.3
UTP20YBL004W DAL1P32375 460 aa0.7□□□□□ -2.3
UTP20YBL004W SRP101P32916 621 aa0.7□□□□□ -2.3
UTP20YBL004W VID24P38263 362 aa0.7□□□□□ -2.3
UTP20YBL004W SER33P40510 469 aa0.7□□□□□ -2.3
UTP20YBL004W SLD3P53135 668 aa0.7□□□□□ -2.3
UTP20YBL004W SAM50P53969 484 aa0.7□□□□□ -2.3
UTP20YBL004W URH1Q04179 340 aa0.7□□□□□ -2.3
UTP20YBL004W YPL277CQ08989 487 aa0.7□□□□□ -2.3
UTP20YBL004W VAS1P07806 1104 aaKnown RBP0.69□□□□□ -2.3
UTP20YBL004W EST1P17214 699 aaPredicted RBP0.69□□□□□ -2.3
UTP20YBL004W YBR144CP34215 104 aa0.69□□□□□ -2.3
UTP20YBL004W PXA1P41909 870 aa0.69□□□□□ -2.3
UTP20YBL004W ATG4P53867 494 aa0.69□□□□□ -2.3
UTP20YBL004W RCO1Q04779 684 aa0.69□□□□□ -2.3
UTP20YBL004W RDL1Q12305 139 aaKnown RBP0.69□□□□□ -2.3
UTP20YBL004W AI1P03875 834 aa0.69□□□□□ -2.3
UTP20YBL004W NSP1P14907 823 aaKnown RBP0.69□□□□□ -2.3
UTP20YBL004W AIM17P23180 465 aaKnown RBP0.69□□□□□ -2.3
UTP20YBL004W PEP3P27801 918 aa0.69□□□□□ -2.3
UTP20YBL004W MRPL39P36533 70 aa0.69□□□□□ -2.3
UTP20YBL004W PZF1P39933 429 aa0.69□□□□□ -2.3
UTP20YBL004W PIG2P40187 538 aa0.69□□□□□ -2.3
UTP20YBL004W YIL001WP40560 513 aa0.69□□□□□ -2.3
UTP20YBL004W MDJ2P42834 146 aa0.69□□□□□ -2.3
UTP20YBL004W YMR279CQ03263 540 aa0.69□□□□□ -2.3
UTP20YBL004W GCN5Q03330 439 aa0.69□□□□□ -2.3
UTP20YBL004W CWC21Q03375 135 aaKnown RBP0.69□□□□□ -2.3
UTP20YBL004W TDA1Q03533 586 aa0.69□□□□□ -2.3
UTP20YBL004W NEW1Q08972 1196 aaKnown RBP0.69□□□□□ -2.3
UTP20YBL004W BEM2P39960 2167 aaKnown RBP0.69□□□□□ -2.3
UTP20YBL004W RIM11P38615 370 aa0.69□□□□□ -2.3
UTP20YBL004W YHR045WP38775 560 aa0.69□□□□□ -2.3
UTP20YBL004W TMN3P40071 706 aa0.69□□□□□ -2.3
UTP20YBL004W COS5P47187 383 aa0.69□□□□□ -2.3
UTP20YBL004W PNP1Q05788 311 aa0.69□□□□□ -2.3
UTP20YBL004W HFA1P32874 2273 aa0.69□□□□□ -2.3
UTP20YBL004W TRL1P09880 827 aaKnown RBP0.69□□□□□ -2.3
UTP20YBL004W STE6P12866 1290 aa0.69□□□□□ -2.3
UTP20YBL004W PEX6P33760 1030 aa0.69□□□□□ -2.3
UTP20YBL004W DOA1P36037 715 aa0.69□□□□□ -2.3
UTP20YBL004W ECM2P38241 364 aaKnown RBP0.69□□□□□ -2.3
UTP20YBL004W RCY1P39531 840 aa0.69□□□□□ -2.3
UTP20YBL004W LSM4P40070 187 aaKnown RBP0.69□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 76.4 ms