RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 ZNF804BA4D1E1 1349 aa13.88□□□□□ -0.19
LITAF-221ENST00000622633 USP17L12C9JPN9 530 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 USP17L21D6R901 530 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 NMT2O60551 498 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 CUL4BQ13620 913 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 CEP85LQ5SZL2 805 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 IGSF22Q8N9C0 903 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 ABCB6Q9NP58 842 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 COL4A1P02462 1669 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 BCORQ6W2J9 1755 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 PPP1R3GB7ZBB8 358 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 RNF40O75150 1001 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 RASSF9O75901 435 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 DPYDQ12882 1025 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 PTGDRQ13258 359 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 CASP8Q14790 479 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 NPY5RQ15761 445 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 ERFEQ4G0M1 354 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 TTC38Q5R3I4 469 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 SPATA21Q7Z572 469 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 CEP57Q86XR8 500 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 FERMT2Q96AC1 680 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 KIFC2Q96AC6 838 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 ANKZF1Q9H8Y5 726 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 ATP6V0A4Q9HBG4 840 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 RAB21Q9UL25 225 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.87□□□□□ -0.19
LITAF-221ENST00000622633 SYNRGQ9UMZ2 1314 aa13.87□□□□□ -0.19
LITAF-221ENST00000622633 A0A0U1RQJ8 604 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 KIAA1328Q86T90 577 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 PPFIBP1Q86W92 1011 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 SRBD1Q8N5C6 995 aaKnown RBP13.86□□□□□ -0.19
LITAF-221ENST00000622633 ACRBPQ8NEB7 543 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 TCP11Q8WWU5 503 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 ATRIPQ8WXE1 791 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 TNFRSF25Q93038 417 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 BRIP1Q9BX63 1249 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 BLZF1Q9H2G9 400 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 COL1A1P02452 1464 aaPredicted RBP13.86□□□□□ -0.19
LITAF-221ENST00000622633 ADAMTS3O15072 1205 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 VEGFAP15692 232 aaPredicted RBP13.86□□□□□ -0.19
LITAF-221ENST00000622633 LAMB3Q13751 1172 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 CAVIN4Q5BKX8 364 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 FAM47AQ5JRC9 791 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 RAD9BQ6WBX8 426 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 TMTC3Q6ZXV5 915 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 FAM228AQ86W67 206 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 FAM84BQ96KN1 310 aaPredicted RBP13.86□□□□□ -0.19
LITAF-221ENST00000622633 PANX2Q96RD6 677 aa13.86□□□□□ -0.19
LITAF-221ENST00000622633 ADD3Q9UEY8 706 aaKnown RBP13.86□□□□□ -0.19
LITAF-221ENST00000622633 ATXN2Q99700 1313 aaKnown RBP13.86□□□□□ -0.19
LITAF-221ENST00000622633 BCL9LQ86UU0 1499 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 SYF2O95926 243 aaKnown RBP13.85□□□□□ -0.19
LITAF-221ENST00000622633 UBE4AQ14139 1066 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 CDKAL1Q5VV42 579 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 GSDMAQ96QA5 445 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 PNKPQ96T60 521 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 YIPF2Q9BWQ6 316 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 LZTFL1Q9NQ48 299 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 MINPP1Q9UNW1 487 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.85□□□□□ -0.19
LITAF-221ENST00000622633 NHSL1Q5SYE7 1610 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 TPD52L2O43399 206 aaKnown RBP13.85□□□□□ -0.19
LITAF-221ENST00000622633 BMP15O95972 392 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 CCDC175P0C221 793 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 ALDH1B1P30837 517 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 IRAK1P51617 712 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 SMTNP53814 917 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 PIK3AP1Q6ZUJ8 805 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 PROCA1Q8NCQ7 364 aaPredicted RBP13.85□□□□□ -0.19
LITAF-221ENST00000622633 CCDC12Q8WUD4 166 aaPredicted RBP13.85□□□□□ -0.19
LITAF-221ENST00000622633 TSGA10Q9BZW7 698 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 CTNND2Q9UQB3 1225 aa13.85□□□□□ -0.19
LITAF-221ENST00000622633 ZEB2O60315 1214 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 FGRP09769 529 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 CALM1P0DP23 149 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 CALM2P0DP24 149 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 CALM3P0DP25 149 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 CYP2D6P10635 497 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 KLRK1P26718 216 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 MCM7P33993 719 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 PBX1P40424 430 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 NLRP5P59047 1200 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 ATP2C1P98194 919 aaPredicted RBP13.84□□□□□ -0.19
LITAF-221ENST00000622633 ZRSR2Q15696 482 aaKnown RBP13.84□□□□□ -0.19
LITAF-221ENST00000622633 DDB1Q16531 1140 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 IL17AQ16552 155 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 B4GALNT2Q8NHY0 566 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 EHD4Q9H223 541 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 KAT14Q9H8E8 782 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 ADGRG1Q9Y653 693 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 RBM47A0AV96 593 aaKnown RBP13.84□□□□□ -0.19
LITAF-221ENST00000622633 LRRIQ3A6PVS8 624 aaPredicted RBP13.84□□□□□ -0.19
LITAF-221ENST00000622633 RPSAP08865 295 aaKnown RBP13.84□□□□□ -0.19
LITAF-221ENST00000622633 PDHBP11177 359 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 EZRP15311 586 aaKnown RBP13.84□□□□□ -0.19
LITAF-221ENST00000622633 CCT6AP40227 531 aaKnown RBP13.84□□□□□ -0.19
LITAF-221ENST00000622633 RANBP1P43487 201 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 FILIP1LQ4L180 1135 aa13.84□□□□□ -0.19
LITAF-221ENST00000622633 MFSD4BQ5TF39 518 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms