RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 PHF20Q9BVI0 1012 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 ZMYND12Q9H0C1 365 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 SLC38A10Q9HBR0 1119 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 SEC63Q9UGP8 760 aaKnown RBP8.62□□□□□ -1.03
VPS45-213ENST00000618148 AGTPBP1Q9UPW5 1226 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 TMEM88BA6NKF7 163 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 ATP2A1O14983 1001 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 RAD21O60216 631 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 MMP1P03956 469 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 XBP1P17861 261 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 U2AF2P26368 475 aaKnown RBP eCLIP8.62□□□□□ -1.03
VPS45-213ENST00000618148 GTF2A2P52657 109 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 OAZ1P54368 228 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 TRAF1Q13077 416 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 COG2Q14746 738 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 TREML2Q5T2D2 321 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 GALNT17Q6IS24 598 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 CCDC148Q8NFR7 591 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 TANGO6Q9C0B7 1094 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 GJB4Q9NTQ9 266 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 VPS54Q9P1Q0 977 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 PNMA2Q9UL42 364 aa8.62□□□□□ -1.03
VPS45-213ENST00000618148 ZNF536O15090 1300 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 SPDYE16A6NNV3 312 aaPredicted RBP8.61□□□□□ -1.03
VPS45-213ENST00000618148 FAM155AB1AL88 458 aaPredicted RBP8.61□□□□□ -1.03
VPS45-213ENST00000618148 M0R2N6 131 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 VWA5AO00534 786 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 FLOT1O75955 427 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 F13A1P00488 732 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 ICAM1P05362 532 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 SLC10A3P09131 477 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 CETPP11597 493 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 CALML3P27482 149 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 KIF23Q02241 960 aaPredicted RBP8.61□□□□□ -1.03
VPS45-213ENST00000618148 GHRHRQ02643 423 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 RESTQ13127 1097 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 RGMBQ6NW40 437 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 HOMER1Q86YM7 354 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 CCDC12Q8WUD4 166 aaPredicted RBP8.61□□□□□ -1.03
VPS45-213ENST00000618148 BRI3BPQ8WY22 251 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 GPKOWQ92917 476 aaPredicted RBP eCLIP8.61□□□□□ -1.03
VPS45-213ENST00000618148 TNFRSF25Q93038 417 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 AMNQ9BXJ7 453 aa8.61□□□□□ -1.03
VPS45-213ENST00000618148 FOXP1Q9H334 677 aaPredicted RBP8.61□□□□□ -1.03
VPS45-213ENST00000618148 ZSCAN16Q9H4T2 348 aaPredicted RBP8.61□□□□□ -1.03
VPS45-213ENST00000618148 VPS37CA5D8V6 355 aaPredicted RBP8.6□□□□□ -1.03
VPS45-213ENST00000618148 H3BQV1 296 aa8.6□□□□□ -1.03
VPS45-213ENST00000618148 IKQ13123 557 aaPredicted RBP8.6□□□□□ -1.03
VPS45-213ENST00000618148 PABPC4Q13310 644 aaKnown RBP eCLIP8.6□□□□□ -1.03
VPS45-213ENST00000618148 TRIM29Q14134 588 aa8.6□□□□□ -1.03
VPS45-213ENST00000618148 IFFO2Q5TF58 517 aa8.6□□□□□ -1.03
VPS45-213ENST00000618148 OTUD7BQ6GQQ9 843 aa8.6□□□□□ -1.03
VPS45-213ENST00000618148 POTEEQ6S8J3 1075 aa8.6□□□□□ -1.03
VPS45-213ENST00000618148 HEATR3Q7Z4Q2 680 aa8.6□□□□□ -1.03
VPS45-213ENST00000618148 ANKRD23Q86SG2 305 aa8.6□□□□□ -1.03
VPS45-213ENST00000618148 MB21D1Q8N884 522 aa8.6□□□□□ -1.03
VPS45-213ENST00000618148 KIFC2Q96AC6 838 aa8.6□□□□□ -1.03
VPS45-213ENST00000618148 ATG4CQ96DT6 458 aa8.6□□□□□ -1.03
VPS45-213ENST00000618148 MAF1Q9H063 256 aa8.6□□□□□ -1.03
VPS45-213ENST00000618148 VAT1LQ9HCJ6 419 aa8.6□□□□□ -1.03
VPS45-213ENST00000618148 ZCCHC17Q9NP64 241 aaKnown RBP8.6□□□□□ -1.03
VPS45-213ENST00000618148 HOXC10Q9NYD6 342 aa8.6□□□□□ -1.03
VPS45-213ENST00000618148 ZNF214Q9UL59 606 aaPredicted RBP8.6□□□□□ -1.03
VPS45-213ENST00000618148 PCDHA1Q9Y5I3 950 aa8.6□□□□□ -1.03
VPS45-213ENST00000618148 KIF28PB7ZC32 967 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 OPLAHO14841 1288 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 NAPAP54920 295 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 GADL1Q6ZQY3 521 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 BRAPQ7Z569 592 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 FBXO11Q86XK2 927 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 DIS3L2Q8IYB7 885 aaKnown RBP8.59□□□□□ -1.03
VPS45-213ENST00000618148 GTF3C2Q8WUA4 911 aaPredicted RBP8.59□□□□□ -1.03
VPS45-213ENST00000618148 CCDC102AQ96A19 550 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 GLT8D2Q9H1C3 349 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 ASCC2Q9H1I8 757 aaPredicted RBP8.59□□□□□ -1.03
VPS45-213ENST00000618148 RIC8AQ9NPQ8 531 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 ISY1Q9ULR0 285 aaKnown RBP8.59□□□□□ -1.03
VPS45-213ENST00000618148 PCDHA4Q9UN74 947 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 KCNJ14Q9UNX9 436 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 CCL15-CCL14A0A0B4J2E2 113 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 MANSC4A6NHS7 340 aaPredicted RBP8.59□□□□□ -1.03
VPS45-213ENST00000618148 RASSF10A6NK89 507 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 BTBD19C9JJ37 291 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 PIK3CDO00329 1044 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 GNA11P29992 359 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 CLK2P49760 499 aaKnown RBP8.59□□□□□ -1.03
VPS45-213ENST00000618148 APLP1P51693 650 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 ZNF157P51786 506 aaPredicted RBP8.59□□□□□ -1.03
VPS45-213ENST00000618148 HERVK_113P62684 666 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 GUCY1B3Q02153 619 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 SAFBQ15424 915 aaKnown RBP eCLIP8.59□□□□□ -1.03
VPS45-213ENST00000618148 CCL15Q16663 113 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.59□□□□□ -1.03
VPS45-213ENST00000618148 NOSTRINQ8IVI9 506 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 BICD2Q8TD16 824 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 PIBF1Q8WXW3 757 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 KHSRPQ92945 711 aaKnown RBP eCLIP8.59□□□□□ -1.03
VPS45-213ENST00000618148 TNPO1Q92973 898 aaKnown RBP8.59□□□□□ -1.03
VPS45-213ENST00000618148 COA7Q96BR5 231 aa8.59□□□□□ -1.03
VPS45-213ENST00000618148 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 213.6 ms