RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 JMJD4Q9H9V9 463 aa9.65□□□□□ -0.86
PSMB3-208ENST00000613870 FEM1BQ9UK73 627 aa9.65□□□□□ -0.86
PSMB3-208ENST00000613870 MYPNQ86TC9 1320 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 PNMA6FA0A0J9YX94 578 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 WDR46O15213 610 aaKnown RBP9.64□□□□□ -0.87
PSMB3-208ENST00000613870 CYTH3O43739 400 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 FLOT1O75955 427 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 BAG4O95429 457 aaKnown RBP9.64□□□□□ -0.87
PSMB3-208ENST00000613870 EN2P19622 333 aaPredicted RBP9.64□□□□□ -0.87
PSMB3-208ENST00000613870 CALML3P27482 149 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 HOXD10P28358 340 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 HOXA7P31268 230 aaPredicted RBP9.64□□□□□ -0.87
PSMB3-208ENST00000613870 KRT2P35908 639 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 FCGRTP55899 365 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 PRKCZQ05513 592 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 RESTQ13127 1097 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 PABPC4Q13310 644 aaKnown RBP eCLIP9.64□□□□□ -0.873e-15■■■□□ 14.7
PSMB3-208ENST00000613870 PKN1Q16512 942 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 CDC37Q16543 378 aaPredicted RBP9.64□□□□□ -0.87
PSMB3-208ENST00000613870 TPRNQ4KMQ1 711 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 KIAA1755Q5JYT7 1200 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 WWC2Q6AWC2 1192 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 CCDC174Q6PII3 467 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 DIS3L2Q8IYB7 885 aaKnown RBP9.64□□□□□ -0.87
PSMB3-208ENST00000613870 ANKRD13CQ8N6S4 541 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 ZNF396Q96N95 335 aaPredicted RBP9.64□□□□□ -0.87
PSMB3-208ENST00000613870 RPAP3Q9H6T3 665 aaPredicted RBP9.64□□□□□ -0.87
PSMB3-208ENST00000613870 RIOX1Q9H6W3 641 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 C6orf50Q9HD87 102 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 EMILIN3Q9NT22 766 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 PRR12Q9ULL5 1215 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 GABRQQ9UN88 632 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 MYH4Q9Y623 1939 aa9.64□□□□□ -0.87
PSMB3-208ENST00000613870 GREB1LQ9C091 1923 aaPredicted RBP9.63□□□□□ -0.87
PSMB3-208ENST00000613870 ZBTB5O15062 677 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 ZBED4O75132 1171 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 MYCP01106 439 aaPredicted RBP9.63□□□□□ -0.87
PSMB3-208ENST00000613870 MMP1P03956 469 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 VCAM1P19320 739 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 TRAF1Q13077 416 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 NBR1Q14596 966 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 CSPP1Q1MSJ5 1256 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 FAM110CQ1W6H9 321 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 SLC35G1Q2M3R5 365 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 QRICH1Q2TAL8 776 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 USH1GQ495M9 461 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 FAM173BQ6P4H8 233 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 BRAPQ7Z569 592 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 FBXO11Q86XK2 927 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 RAET1EQ8TD07 263 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 COA7Q96BR5 231 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 P2RX7Q99572 595 aaKnown RBP9.63□□□□□ -0.87
PSMB3-208ENST00000613870 SLF1Q9BQI6 1058 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 SH3GLB2Q9NR46 395 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 FBXO28Q9NVF7 368 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 BARHL2Q9NY43 387 aa9.63□□□□□ -0.87
PSMB3-208ENST00000613870 TFIP11Q9UBB9 837 aaKnown RBP9.63□□□□□ -0.87
PSMB3-208ENST00000613870 PLXNB2O15031 1838 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 SMCO2A6NFE2 343 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 BTBD18B2RXH4 712 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 STXBP3O00186 592 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 FIBPO43427 364 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 PEX10O60683 326 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 ATP2B1P20020 1258 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 GNA11P29992 359 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 GRK4P32298 578 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 GCLCP48506 637 aaPredicted RBP9.62□□□□□ -0.87
PSMB3-208ENST00000613870 FLT3LGP49771 235 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 ADCY7P51828 1080 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 KRT85P78386 507 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 CEBPZQ03701 1054 aaKnown RBP9.62□□□□□ -0.87
PSMB3-208ENST00000613870 DNM1Q05193 864 aaKnown RBP9.62□□□□□ -0.87
PSMB3-208ENST00000613870 MTFR1Q15390 333 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 POTEEQ6S8J3 1075 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 BLIDQ8IZY5 108 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 PRPF38AQ8NAV1 312 aaKnown RBP9.62□□□□□ -0.87
PSMB3-208ENST00000613870 BICD2Q8TD16 824 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 CHAMP1Q96JM3 812 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 C12orf42Q96LP6 360 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 TMEM106CQ9BVX2 250 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 AMNQ9BXJ7 453 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 MORF4L1Q9UBU8 362 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 NOL7Q9UMY1 257 aaKnown RBP9.62□□□□□ -0.87
PSMB3-208ENST00000613870 PCDHA1Q9Y5I3 950 aa9.62□□□□□ -0.87
PSMB3-208ENST00000613870 CCDC194A0A1B0GVG4 234 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 DDX11L8A8MPP1 907 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 USP17L15C9J2P7 530 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 USP17L13C9JLJ4 530 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 USP17L11C9JVI0 530 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 USP17L18D6R9N7 530 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 USP17L22D6RA61 530 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 USP17L17D6RBQ6 530 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 USP17L19D6RCP7 530 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 USP17L20D6RJB6 530 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 hCG_1984214I3L0E3 225 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 TNPO2O14787 897 aaKnown RBP9.61□□□□□ -0.87
PSMB3-208ENST00000613870 MCM4P33991 863 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 MRPL12P52815 198 aaKnown RBP9.61□□□□□ -0.87
PSMB3-208ENST00000613870 HERVK_113P62684 666 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms