RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 RINT1Q6NUQ1 792 aa19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 FAM178BQ8IXR5 827 aa19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 STAG1Q8WVM7 1258 aa19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 ADPGKQ9BRR6 497 aa19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 DDX25Q9UHL0 483 aaKnown RBP19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 MGEA5O60502 916 aa19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 CYP2J2P51589 502 aa19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 CPXCR1Q8N123 301 aa19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 PABPC4Q13310 644 aaKnown RBP eCLIP19.04■□□□□ 0.643e-6■■■□□ 16
HMGXB3-206ENST00000613459 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 HESX1Q9UBX0 185 aa19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 PCDHA7Q9UN72 937 aa19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 K7ENM7 598 aa19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 COPB1P53618 953 aaKnown RBP19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 YARSP54577 528 aaKnown RBP19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 FAM47AQ5JRC9 791 aa19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 FAM102BQ5T8I3 360 aa19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 USP44Q9H0E7 712 aa19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 ZNF215Q9UL58 517 aaPredicted RBP19.04■□□□□ 0.64
HMGXB3-206ENST00000613459 FBXO11Q86XK2 927 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 MAP7D3Q8IWC1 876 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 IPO11Q9UI26 975 aaKnown RBP19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 LPXNO60711 386 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 GSPT1P15170 499 aaKnown RBP19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 HSPA6P17066 643 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 CDC23Q9UJX2 597 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 A0A0D9SFI3 127 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 ARHGEF16Q5VV41 709 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 COPRSQ9NQ92 184 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 RAD51AP2Q09MP3 1159 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 AP1ARQ63HQ0 302 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 OSBPL3Q9H4L5 887 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 TECP42680 631 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 ZYXQ15942 572 aaKnown RBP19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 DBN1Q16643 649 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 GDAP1L1Q96MZ0 367 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 RNF26Q9BY78 433 aaPredicted RBP19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 TRIM4Q9C037 500 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 SPC25Q9HBM1 224 aa19.03■□□□□ 0.64
HMGXB3-206ENST00000613459 DMP1Q13316 513 aaPredicted RBP19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 EFCAB13Q8IY85 973 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 GLG1Q92896 1179 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 CCDC17Q96LX7 622 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 GCFC2P16383 781 aaKnown RBP19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 MFAP3P55082 362 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 ADAM9Q13443 819 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 KMT5BQ4FZB7 885 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 HSP90AA5PQ58FG0 334 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 ARMC9Q7Z3E5 817 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 POLR3EQ9NVU0 708 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 ABCC12Q96J65 1359 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 KLRF2D3W0D1 207 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 LIG3P49916 1009 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 PPP2R5DQ14738 602 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 PPP2R5AQ15172 486 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 NRBP2Q9NSY0 501 aa19.02■□□□□ 0.64
HMGXB3-206ENST00000613459 LRRD1A4D1F6 860 aa19.02■□□□□ 0.63
HMGXB3-206ENST00000613459 ATP1A2P50993 1020 aa19.02■□□□□ 0.63
HMGXB3-206ENST00000613459 SLC39A14Q15043 492 aa19.02■□□□□ 0.63
HMGXB3-206ENST00000613459 FBXO18Q8NFZ0 1043 aa19.02■□□□□ 0.63
HMGXB3-206ENST00000613459 GPT2Q8TD30 523 aa19.02■□□□□ 0.63
HMGXB3-206ENST00000613459 STAMQ92783 540 aa19.02■□□□□ 0.63
HMGXB3-206ENST00000613459 LMTK3Q96Q04 1460 aa19.02■□□□□ 0.63
HMGXB3-206ENST00000613459 BFSP1Q12934 665 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 MFSD14BQ5SR56 506 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 RNF8O76064 485 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 POLR2FP61218 127 aaKnown RBP19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 ASPRV1Q53RT3 343 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 PRR16Q569H4 304 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 C10orf76Q5T2E6 689 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 FAM160B1Q5W0V3 765 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 PHLPP2Q6ZVD8 1323 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 JPH2Q9BR39 696 aaPredicted RBP19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 ABCB4P21439 1286 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 NSFP46459 744 aaKnown RBP19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 EXOC8Q8IYI6 725 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 DESI2Q9BSY9 194 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 PTH1RQ03431 593 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 XKR9Q5GH70 373 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 GPATCH4Q5T3I0 446 aaKnown RBP19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 ARMCX5Q6P1M9 558 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 FANCLQ9NW38 375 aa19.01■□□□□ 0.63
HMGXB3-206ENST00000613459 SUN1O94901 812 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 PDIA3P30101 505 aaKnown RBP19■□□□□ 0.63
HMGXB3-206ENST00000613459 EXOC3L4Q17RC7 722 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 MAP4K1Q92918 833 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 PPP1R13BQ96KQ4 1090 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 MLXIPQ9HAP2 919 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 AATKQ6ZMQ8 1374 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 XPOTO43592 962 aaKnown RBP19■□□□□ 0.63
HMGXB3-206ENST00000613459 IL9RQ01113 521 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 ASPHQ12797 758 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 SEPT2Q15019 361 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 CCHCR1Q8TD31 782 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 IFNB1P01574 187 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 LRMPQ12912 555 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 CCDC93Q567U6 631 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 LRRC8CQ8TDW0 803 aa19■□□□□ 0.63
HMGXB3-206ENST00000613459 EAF2Q96CJ1 260 aaPredicted RBP19■□□□□ 0.63
HMGXB3-206ENST00000613459 PDE11AQ9HCR9 933 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms