RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 DEFB129Q9H1M3 183 aa5.75□□□□□ -1.49
SSX9-202ENST00000608568 SPATS2LQ9NUQ6 558 aaKnown RBP5.75□□□□□ -1.49
SSX9-202ENST00000608568 C9orf78Q9NZ63 289 aaPredicted RBP5.75□□□□□ -1.49
SSX9-202ENST00000608568 GGA2Q9UJY4 613 aa5.75□□□□□ -1.49
SSX9-202ENST00000608568 RAB21Q9UL25 225 aa5.75□□□□□ -1.49
SSX9-202ENST00000608568 RFX7Q2KHR2 1363 aa5.75□□□□□ -1.49
SSX9-202ENST00000608568 PRUNE2Q8WUY3 3088 aa5.75□□□□□ -1.49
SSX9-202ENST00000608568 A0A0G2JMZ2 1700 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 GOLGA6L4A6NEF3 574 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 EBAG9O00559 213 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 SHOX2O60902 331 aaPredicted RBP5.74□□□□□ -1.49
SSX9-202ENST00000608568 SLURP2P0DP57 97 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 FGFR2P21802 821 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 SFPQP23246 707 aaKnown RBP eCLIP5.74□□□□□ -1.49
SSX9-202ENST00000608568 HNRNPH1P31943 449 aaKnown RBP5.74□□□□□ -1.49
SSX9-202ENST00000608568 PRPHP41219 470 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 CRKP46108 304 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 RGS19P49795 217 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 BCAMP50895 628 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 EVCP57679 992 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 USP46P62068 366 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 FKBP1BP68106 108 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 LMNB2Q03252 620 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 SART3Q15020 963 aaKnown RBP5.74□□□□□ -1.49
SSX9-202ENST00000608568 PPP2R5AQ15172 486 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 RBBP5Q15291 538 aaKnown RBP5.74□□□□□ -1.49
SSX9-202ENST00000608568 DLGAP5Q15398 846 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 LONRF2Q1L5Z9 754 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 CCDC57Q2TAC2 916 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 ANO6Q4KMQ2 910 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 RCSD1Q6JBY9 416 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 MICALCLQ6ZW33 695 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 ATG9AQ7Z3C6 839 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 FBXO33Q7Z6M2 555 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 ARMC2Q8NEN0 867 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 MKL1Q969V6 931 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 ESYT1Q9BSJ8 1104 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 PAGR1Q9BTK6 254 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 TMEM39BQ9GZU3 492 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 TDRD3Q9H7E2 651 aaKnown RBP5.74□□□□□ -1.49
SSX9-202ENST00000608568 HMX1Q9NP08 348 aaPredicted RBP5.74□□□□□ -1.49
SSX9-202ENST00000608568 ANO10Q9NW15 660 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 ETAA1Q9NY74 926 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 ZNF70Q9UC06 446 aaPredicted RBP5.74□□□□□ -1.49
SSX9-202ENST00000608568 MCM8Q9UJA3 840 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 TTF2Q9UNY4 1162 aaKnown RBP5.74□□□□□ -1.49
SSX9-202ENST00000608568 LIMCH1Q9UPQ0 1083 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 PA2G4Q9UQ80 394 aaKnown RBP5.74□□□□□ -1.49
SSX9-202ENST00000608568 SMC3Q9UQE7 1217 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 CNPY2Q9Y2B0 182 aa5.74□□□□□ -1.49
SSX9-202ENST00000608568 GREB1LQ9C091 1923 aaPredicted RBP5.74□□□□□ -1.49
SSX9-202ENST00000608568 A0A0C4DFX4 3053 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 CUL9Q8IWT3 2517 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 ATRNL1Q5VV63 1379 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 UNCXA6NJT0 531 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 SRRM3A6NNA2 597 aaPredicted RBP5.73□□□□□ -1.49
SSX9-202ENST00000608568 BECN2A8MW95 431 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 TCP10L2B9ZVM9 353 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 MPHOSPH10O00566 681 aaKnown RBP5.73□□□□□ -1.49
SSX9-202ENST00000608568 SMARCA5O60264 1052 aaPredicted RBP5.73□□□□□ -1.49
SSX9-202ENST00000608568 GPR37L1O60883 481 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 USP2O75604 605 aaPredicted RBP5.73□□□□□ -1.49
SSX9-202ENST00000608568 SASH3O75995 380 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 FSBPO95073 299 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 SYT1P21579 422 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 DNAJB2P25686 324 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 ADORA1P30542 326 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 HSPA4P34932 840 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 AARSP49588 968 aaKnown RBP eCLIP5.73□□□□□ -1.49
SSX9-202ENST00000608568 FKBP1AP62942 108 aaKnown RBP5.73□□□□□ -1.49
SSX9-202ENST00000608568 IFFO1Q0D2I5 559 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 GRIK3Q13003 919 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 SEMA3FQ13275 785 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 UBE4AQ14139 1066 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 RASA3Q14644 834 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 IQCB1Q15051 598 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 CCDC144BQ3MJ40 725 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 METTL24Q5JXM2 366 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 VPS53Q5VIR6 699 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 WWC2Q6AWC2 1192 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 LRRC31Q6UY01 552 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 CTU1Q7Z7A3 348 aaKnown RBP5.73□□□□□ -1.49
SSX9-202ENST00000608568 LUZP1Q86V48 1076 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 CCDC144CPQ8IYA2 1237 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 OGFOD1Q8N543 542 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 ZNF454Q8N9F8 522 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 MSANTD4Q8NCY6 345 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 PRR7Q8TB68 274 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 FAXDC2Q96IV6 333 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 UCN2Q96RP3 112 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 MEIS3Q99687 375 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 PTPN18Q99952 460 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 TM6SF1Q9BZW5 370 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 SIL1Q9H173 461 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 ELP3Q9H9T3 547 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 PDRG1Q9NUG6 133 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 FAM198AQ9UFP1 575 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 HDAC9Q9UKV0 1011 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 HPS5Q9UPZ3 1129 aa5.73□□□□□ -1.49
SSX9-202ENST00000608568 EXOC6BQ9Y2D4 811 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms