RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 TRIM22Q8IYM9 498 aa23.13■■□□□ 1.29
SHKBP1-222ENST00000600320 ZNF296Q8WUU4 475 aaPredicted RBP23.13■■□□□ 1.29
SHKBP1-222ENST00000600320 CLEC4DQ8WXI8 215 aa23.13■■□□□ 1.29
SHKBP1-222ENST00000600320 SHISA4Q96DD7 197 aa23.13■■□□□ 1.29
SHKBP1-222ENST00000600320 AIFM3Q96NN9 605 aa23.13■■□□□ 1.29
SHKBP1-222ENST00000600320 LLPHQ9BRT6 129 aaKnown RBP23.13■■□□□ 1.29
SHKBP1-222ENST00000600320 ORC3Q9UBD5 711 aaPredicted RBP23.13■■□□□ 1.29
SHKBP1-222ENST00000600320 SCG2P13521 617 aa23.12■■□□□ 1.29
SHKBP1-222ENST00000600320 LACTBP83111 547 aaPredicted RBP23.12■■□□□ 1.29
SHKBP1-222ENST00000600320 HEATR3Q7Z4Q2 680 aa23.12■■□□□ 1.29
SHKBP1-222ENST00000600320 TRERF1Q96PN7 1200 aa23.12■■□□□ 1.29
SHKBP1-222ENST00000600320 RBM27Q9P2N5 1060 aaKnown RBP23.12■■□□□ 1.29
SHKBP1-222ENST00000600320 PCDHA1Q9Y5I3 950 aa23.12■■□□□ 1.29
SHKBP1-222ENST00000600320 ABCB11O95342 1321 aa23.11■■□□□ 1.29
SHKBP1-222ENST00000600320 NFIBO00712 420 aa23.11■■□□□ 1.29
SHKBP1-222ENST00000600320 FKTNO75072 461 aa23.11■■□□□ 1.29
SHKBP1-222ENST00000600320 DEXIO95424 95 aa23.11■■□□□ 1.29
SHKBP1-222ENST00000600320 TKFCQ3LXA3 575 aa23.11■■□□□ 1.29
SHKBP1-222ENST00000600320 WDR78Q5VTH9 848 aa23.11■■□□□ 1.29
SHKBP1-222ENST00000600320 CD99L2Q8TCZ2 262 aa23.11■■□□□ 1.29
SHKBP1-222ENST00000600320 PNMA2Q9UL42 364 aa23.11■■□□□ 1.29
SHKBP1-222ENST00000600320 STXBP3O00186 592 aa23.1■■□□□ 1.29
SHKBP1-222ENST00000600320 OPLAHO14841 1288 aa23.1■■□□□ 1.29
SHKBP1-222ENST00000600320 COPB2P35606 906 aa23.1■■□□□ 1.29
SHKBP1-222ENST00000600320 GPR142Q7Z601 462 aa23.1■■□□□ 1.29
SHKBP1-222ENST00000600320 CHST13Q8NET6 341 aa23.1■■□□□ 1.29
SHKBP1-222ENST00000600320 MROH8Q9H579 483 aa23.1■■□□□ 1.29
SHKBP1-222ENST00000600320 ACAD9Q9H845 621 aa23.1■■□□□ 1.29
SHKBP1-222ENST00000600320 MGAMO43451 1857 aa23.09■■□□□ 1.29
SHKBP1-222ENST00000600320 MAPK4P31152 587 aa23.09■■□□□ 1.29
SHKBP1-222ENST00000600320 PSMC4P43686 418 aa23.09■■□□□ 1.29
SHKBP1-222ENST00000600320 TBC1D5Q92609 795 aa23.09■■□□□ 1.29
SHKBP1-222ENST00000600320 TRIM47Q96LD4 638 aa23.09■■□□□ 1.29
SHKBP1-222ENST00000600320 BARHL2Q9NY43 387 aa23.09■■□□□ 1.29
SHKBP1-222ENST00000600320 VPS54Q9P1Q0 977 aa23.09■■□□□ 1.29
SHKBP1-222ENST00000600320 MRPL11Q9Y3B7 192 aaKnown RBP23.09■■□□□ 1.29
SHKBP1-222ENST00000600320 PLEKHH3Q7Z736 793 aa23.08■■□□□ 1.29
SHKBP1-222ENST00000600320 CCAR1Q8IX12 1150 aaKnown RBP23.08■■□□□ 1.29
SHKBP1-222ENST00000600320 GJB4Q9NTQ9 266 aa23.08■■□□□ 1.29
SHKBP1-222ENST00000600320 FOXD4L1Q9NU39 408 aa23.08■■□□□ 1.29
SHKBP1-222ENST00000600320 PTPREP23469 700 aa23.07■■□□□ 1.28
SHKBP1-222ENST00000600320 NAPAP54920 295 aa23.07■■□□□ 1.28
SHKBP1-222ENST00000600320 FCGRTP55899 365 aa23.07■■□□□ 1.28
SHKBP1-222ENST00000600320 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.07■■□□□ 1.28
SHKBP1-222ENST00000600320 MMP19Q99542 508 aa23.07■■□□□ 1.28
SHKBP1-222ENST00000600320 ALG1Q9BT22 464 aa23.07■■□□□ 1.28
SHKBP1-222ENST00000600320 A1CFQ9NQ94 594 aaKnown RBP23.07■■□□□ 1.28
SHKBP1-222ENST00000600320 FBXO40Q9UH90 709 aa23.07■■□□□ 1.28
SHKBP1-222ENST00000600320 PLXNB2O15031 1838 aa23.07■■□□□ 1.28
SHKBP1-222ENST00000600320 DOCK3Q8IZD9 2030 aa23.06■■□□□ 1.28
SHKBP1-222ENST00000600320 hCG_1984214I3L0E3 225 aa23.06■■□□□ 1.28
SHKBP1-222ENST00000600320 TNPO2O14787 897 aaKnown RBP23.06■■□□□ 1.28
SHKBP1-222ENST00000600320 CTCFP49711 727 aaPredicted RBP23.06■■□□□ 1.28
SHKBP1-222ENST00000600320 LBX1P52954 281 aa23.06■■□□□ 1.28
SHKBP1-222ENST00000600320 FOSBP53539 338 aa23.06■■□□□ 1.28
SHKBP1-222ENST00000600320 HMGN5P82970 282 aaKnown RBP23.06■■□□□ 1.28
SHKBP1-222ENST00000600320 TRAF1Q13077 416 aa23.06■■□□□ 1.28
SHKBP1-222ENST00000600320 NSMFQ6X4W1 530 aa23.06■■□□□ 1.28
SHKBP1-222ENST00000600320 ZNF713Q8N859 430 aaPredicted RBP23.06■■□□□ 1.28
SHKBP1-222ENST00000600320 ERO1AQ96HE7 468 aa23.06■■□□□ 1.28
SHKBP1-222ENST00000600320 CWC22Q9HCG8 908 aaKnown RBP23.06■■□□□ 1.28
SHKBP1-222ENST00000600320 ADAMTS3O15072 1205 aa23.05■■□□□ 1.28
SHKBP1-222ENST00000600320 KIF22Q14807 665 aa23.05■■□□□ 1.28
SHKBP1-222ENST00000600320 PPP1R18Q6NYC8 613 aa23.05■■□□□ 1.28
SHKBP1-222ENST00000600320 SLC30A10Q6XR72 485 aa23.05■■□□□ 1.28
SHKBP1-222ENST00000600320 SMC3Q9UQE7 1217 aa23.05■■□□□ 1.28
SHKBP1-222ENST00000600320 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.05■■□□□ 1.28
SHKBP1-222ENST00000600320 FCER1AP12319 257 aa23.04■■□□□ 1.28
SHKBP1-222ENST00000600320 GJB2P29033 226 aa23.04■■□□□ 1.28
SHKBP1-222ENST00000600320 BAATQ14032 418 aaPredicted RBP23.04■■□□□ 1.28
SHKBP1-222ENST00000600320 GRB14Q14449 540 aa23.04■■□□□ 1.28
SHKBP1-222ENST00000600320 MORN1Q5T089 497 aa23.04■■□□□ 1.28
SHKBP1-222ENST00000600320 WASF1Q92558 559 aa23.04■■□□□ 1.28
SHKBP1-222ENST00000600320 INTS4Q96HW7 963 aaKnown RBP23.04■■□□□ 1.28
SHKBP1-222ENST00000600320 CYP39A1Q9NYL5 469 aa23.04■■□□□ 1.28
SHKBP1-222ENST00000600320 GJD2Q9UKL4 321 aa23.04■■□□□ 1.28
SHKBP1-222ENST00000600320 GABRQQ9UN88 632 aa23.04■■□□□ 1.28
SHKBP1-222ENST00000600320 CASP8AP2Q9UKL3 1982 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 SMCO2A6NFE2 343 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 SLC15A5A6NIM6 579 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 PGK2P07205 417 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 ADORA2AP29274 412 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 RPS6P62753 249 aaKnown RBP23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 GHRHRQ02643 423 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 KCTD2Q14681 263 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 RNF207Q6ZRF8 634 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 ABRAQ8N0Z2 381 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 ANKRD35Q8N283 1001 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 FAM184AQ8NB25 1140 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 PURBQ96QR8 312 aaKnown RBP23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 SH3GLB2Q9NR46 395 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 COL20A1Q9P218 1284 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 KCNJ14Q9UNX9 436 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 RBM19Q9Y4C8 960 aaKnown RBP23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 IVNS1ABPQ9Y6Y0 642 aa23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 RBBP6Q7Z6E9 1792 aaKnown RBP23.03■■□□□ 1.28
SHKBP1-222ENST00000600320 DNAJC25-GNG10A0A024R161 153 aa23.02■■□□□ 1.28
SHKBP1-222ENST00000600320 ESYT2A0FGR8 921 aa23.02■■□□□ 1.28
SHKBP1-222ENST00000600320 STRNO43815 780 aa23.02■■□□□ 1.28
SHKBP1-222ENST00000600320 COBLO75128 1261 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms