RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 CACNB3P54284 484 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 FANCCQ00597 558 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 TNFAIP1Q13829 316 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 KCNB1Q14721 858 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 NOLC1Q14978 699 aaKnown RBP eCLIP11.74□□□□□ -0.53
VPS25-203ENST00000589520 SEPT2Q15019 361 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 IL17AQ16552 155 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 PDXDC2PQ6P474 469 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 MOXD1Q6UVY6 613 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 CCDC150Q8NCX0 1101 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 KIAA1524Q8TCG1 905 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 CALML4Q96GE6 196 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 ZBED3Q96IU2 234 aaPredicted RBP11.74□□□□□ -0.53
VPS25-203ENST00000589520 CTAGE1Q96RT6 745 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 AMNQ9BXJ7 453 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 GOPCQ9HD26 462 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 SPTLC3Q9NUV7 552 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 BIN2Q9UBW5 565 aaPredicted RBP11.74□□□□□ -0.53
VPS25-203ENST00000589520 FOXN1O15353 648 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 SERPINC1P01008 464 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 CDK11BP21127 795 aaKnown RBP11.73□□□□□ -0.53
VPS25-203ENST00000589520 AFMP43652 599 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 UBASH3AP57075 661 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 CXCL9Q07325 125 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 SPATA1Q5VX52 437 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 JAKMIP3Q5VZ66 844 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 KCTD1Q719H9 257 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 CABP7Q86V35 215 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 SIAH1Q8IUQ4 282 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 RASSF8Q8NHQ8 419 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 CHURC1Q8WUH1 139 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 DPF2Q92785 391 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 COA7Q96BR5 231 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 MTMR9Q96QG7 549 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 CPVLQ9H3G5 476 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 TTC12Q9H892 705 aaPredicted RBP11.73□□□□□ -0.53
VPS25-203ENST00000589520 LTBP3Q9NS15 1303 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 TMX2Q9Y320 296 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 PCDHAC2Q9Y5I4 1007 aa11.73□□□□□ -0.53
VPS25-203ENST00000589520 SCN9AQ15858 1988 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 CYP3A7-CYP3A51PA0A087WV96 503 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 A0A087X0B3 334 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.72□□□□□ -0.53
VPS25-203ENST00000589520 TCP10L2B9ZVM9 353 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 USP17L10C9JJH3 530 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 GH2P01242 217 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 PRR29P0C7W0 189 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 BMP6P22004 513 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 CYP3A7P24462 503 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 ZNF280AP59817 542 aaPredicted RBP11.72□□□□□ -0.53
VPS25-203ENST00000589520 SPAG1Q07617 926 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 STIM1Q13586 685 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 GPR162Q16538 588 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 CDC37Q16543 378 aaPredicted RBP11.72□□□□□ -0.53
VPS25-203ENST00000589520 CALCRLQ16602 461 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 QRICH1Q2TAL8 776 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 ZNF658Q5TYW1 1059 aaPredicted RBP11.72□□□□□ -0.53
VPS25-203ENST00000589520 SYDE2Q5VT97 1194 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 ISM2Q6H9L7 571 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 TTBK2Q6IQ55 1244 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 LRRC8AQ8IWT6 810 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 KCTD17Q8N5Z5 321 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 IGSF22Q8N9C0 903 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 TMEM60Q9H2L4 133 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 IFNKQ9P0W0 207 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 STK17AQ9UEE5 414 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 PNMA2Q9UL42 364 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 PCDHA1Q9Y5I3 950 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 PSME4Q14997 1843 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 KIF13BQ9NQT8 1826 aa11.72□□□□□ -0.53
VPS25-203ENST00000589520 ADAMTS3O15072 1205 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 TBX3O15119 743 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 NDUFB10O96000 172 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 RPN1P04843 607 aaKnown RBP11.71□□□□□ -0.53
VPS25-203ENST00000589520 ZNF18P17022 549 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 PTGS1P23219 599 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 KRT79Q5XKE5 535 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 FAM160B2Q86V87 743 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 FBXO11Q86XK2 927 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 ANKRD20A12PQ8NF67 263 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 HOOK2Q96ED9 719 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 ZNF830Q96NB3 372 aaPredicted RBP11.71□□□□□ -0.53
VPS25-203ENST00000589520 XPO4Q9C0E2 1151 aaKnown RBP11.71□□□□□ -0.53
VPS25-203ENST00000589520 KCND1Q9NSA2 647 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 KBTBD4Q9NVX7 518 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 FANCLQ9NW38 375 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 LRWD1Q9UFC0 647 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 RWDD2AQ9UIY3 292 aa11.71□□□□□ -0.53
VPS25-203ENST00000589520 ZNF646O15015 1829 aaPredicted RBP11.71□□□□□ -0.54
VPS25-203ENST00000589520 MYH8P13535 1937 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 A0A087WWV3 80 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 PPP1R3GB7ZBB8 358 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 TMEM232C9JQI7 657 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 CCP110O43303 1012 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 MARCH6O60337 910 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 GDF11O95390 407 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 TUBB4AP04350 444 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 ASNSP08243 561 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 LMOD1P29536 600 aaPredicted RBP11.7□□□□□ -0.54
VPS25-203ENST00000589520 SLC16A2P36021 539 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms