RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 SLC35G1Q2M3R5 365 aa17.98■□□□□ 0.47
GHDC-209ENST00000588762 SLKQ9H2G2 1235 aaPredicted RBP17.98■□□□□ 0.47
GHDC-209ENST00000588762 FAM217BQ9NTX9 383 aaPredicted RBP17.98■□□□□ 0.47
GHDC-209ENST00000588762 GJD2Q9UKL4 321 aa17.98■□□□□ 0.47
GHDC-209ENST00000588762 TPCN1Q9ULQ1 816 aa17.98■□□□□ 0.47
GHDC-209ENST00000588762 GABRQQ9UN88 632 aa17.98■□□□□ 0.47
GHDC-209ENST00000588762 PTPN22Q9Y2R2 807 aa17.98■□□□□ 0.47
GHDC-209ENST00000588762 CPLX1O14810 134 aa17.97■□□□□ 0.47
GHDC-209ENST00000588762 ADORA2AP29274 412 aa17.97■□□□□ 0.47
GHDC-209ENST00000588762 RGS2P41220 211 aa17.97■□□□□ 0.47
GHDC-209ENST00000588762 MAP2K5Q13163 448 aa17.97■□□□□ 0.47
GHDC-209ENST00000588762 GRB14Q14449 540 aa17.97■□□□□ 0.47
GHDC-209ENST00000588762 MORN1Q5T089 497 aa17.97■□□□□ 0.47
GHDC-209ENST00000588762 FBXO46Q6PJ61 603 aaPredicted RBP17.97■□□□□ 0.47
GHDC-209ENST00000588762 CPLX2Q6PUV4 134 aaKnown RBP17.97■□□□□ 0.47
GHDC-209ENST00000588762 DPP9Q86TI2 863 aa17.97■□□□□ 0.47
GHDC-209ENST00000588762 ANKRD35Q8N283 1001 aa17.97■□□□□ 0.47
GHDC-209ENST00000588762 DDX11Q96FC9 970 aa17.97■□□□□ 0.47
GHDC-209ENST00000588762 NCOA5Q9HCD5 579 aaKnown RBP17.97■□□□□ 0.47
GHDC-209ENST00000588762 SLC5A4Q9NY91 659 aa17.97■□□□□ 0.47
GHDC-209ENST00000588762 IRF5Q13568 498 aa17.96■□□□□ 0.47
GHDC-209ENST00000588762 MUM1L1Q5H9M0 696 aa17.96■□□□□ 0.47
GHDC-209ENST00000588762 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.96■□□□□ 0.47
GHDC-209ENST00000588762 LIMCH1Q9UPQ0 1083 aa17.96■□□□□ 0.47
GHDC-209ENST00000588762 MRPL11Q9Y3B7 192 aaKnown RBP17.96■□□□□ 0.47
GHDC-209ENST00000588762 PCDHA1Q9Y5I3 950 aa17.96■□□□□ 0.47
GHDC-209ENST00000588762 PTCH2Q9Y6C5 1203 aa17.96■□□□□ 0.47
GHDC-209ENST00000588762 PFASO15067 1338 aa17.96■□□□□ 0.46
GHDC-209ENST00000588762 CNTNAP5Q8WYK1 1306 aa17.96■□□□□ 0.46
GHDC-209ENST00000588762 PFKFB2O60825 505 aa17.95■□□□□ 0.46
GHDC-209ENST00000588762 XRCC5P13010 732 aaKnown RBP17.95■□□□□ 0.46
GHDC-209ENST00000588762 TAL1P17542 331 aaPredicted RBP17.95■□□□□ 0.46
GHDC-209ENST00000588762 CYP2B6P20813 491 aa17.95■□□□□ 0.46
GHDC-209ENST00000588762 AKAP17AQ02040 695 aaKnown RBP17.95■□□□□ 0.46
GHDC-209ENST00000588762 FUT2Q10981 343 aa17.95■□□□□ 0.46
GHDC-209ENST00000588762 COL13A1Q5TAT6 717 aaPredicted RBP17.95■□□□□ 0.46
GHDC-209ENST00000588762 NSMFQ6X4W1 530 aa17.95■□□□□ 0.46
GHDC-209ENST00000588762 USP6NLQ92738 828 aa17.95■□□□□ 0.46
GHDC-209ENST00000588762 APBA2Q99767 749 aa17.95■□□□□ 0.46
GHDC-209ENST00000588762 RBM27Q9P2N5 1060 aaKnown RBP17.95■□□□□ 0.46
GHDC-209ENST00000588762 V9GY48 417 aaPredicted RBP17.95■□□□□ 0.46
GHDC-209ENST00000588762 hCG_1642624A0A1W2PR95 340 aa17.94■□□□□ 0.46
GHDC-209ENST00000588762 ADCY3O60266 1144 aa17.94■□□□□ 0.46
GHDC-209ENST00000588762 PPP1R11O60927 126 aaPredicted RBP17.94■□□□□ 0.46
GHDC-209ENST00000588762 IFNAR1P17181 557 aa17.94■□□□□ 0.46
GHDC-209ENST00000588762 MCF2L2Q86YR7 1114 aa17.94■□□□□ 0.46
GHDC-209ENST00000588762 TRMT44Q8IYL2 757 aaKnown RBP17.94■□□□□ 0.46
GHDC-209ENST00000588762 CLEC4DQ8WXI8 215 aa17.94■□□□□ 0.46
GHDC-209ENST00000588762 ZSCAN31Q96LW9 406 aaPredicted RBP17.94■□□□□ 0.46
GHDC-209ENST00000588762 MCOLN1Q9GZU1 580 aa17.94■□□□□ 0.46
GHDC-209ENST00000588762 A1CFQ9NQ94 594 aaKnown RBP17.94■□□□□ 0.46
GHDC-209ENST00000588762 NFIBO00712 420 aa17.93■□□□□ 0.46
GHDC-209ENST00000588762 CDKL5O76039 1030 aa17.93■□□□□ 0.46
GHDC-209ENST00000588762 PGK2P07205 417 aa17.93■□□□□ 0.46
GHDC-209ENST00000588762 HOXC6P09630 235 aa17.93■□□□□ 0.46
GHDC-209ENST00000588762 ME3Q16798 604 aa17.93■□□□□ 0.46
GHDC-209ENST00000588762 TRIM22Q8IYM9 498 aa17.93■□□□□ 0.46
GHDC-209ENST00000588762 SLAIN1Q8ND83 568 aa17.93■□□□□ 0.46
GHDC-209ENST00000588762 RGS22Q8NE09 1264 aa17.93■□□□□ 0.46
GHDC-209ENST00000588762 MAF1Q9H063 256 aa17.93■□□□□ 0.46
GHDC-209ENST00000588762 PTPDC1A2A3K4 754 aa17.92■□□□□ 0.46
GHDC-209ENST00000588762 POTEB2H3BUK9 544 aa17.92■□□□□ 0.46
GHDC-209ENST00000588762 PRPF3O43395 683 aaKnown RBP17.92■□□□□ 0.46
GHDC-209ENST00000588762 COBLO75128 1261 aa17.92■□□□□ 0.46
GHDC-209ENST00000588762 GRK4P32298 578 aa17.92■□□□□ 0.46
GHDC-209ENST00000588762 SSRP1Q08945 709 aaKnown RBP17.92■□□□□ 0.46
GHDC-209ENST00000588762 SCRN1Q12765 414 aa17.92■□□□□ 0.46
GHDC-209ENST00000588762 NTRK3Q16288 839 aa17.92■□□□□ 0.46
GHDC-209ENST00000588762 SLC9C1Q4G0N8 1177 aa17.92■□□□□ 0.46
GHDC-209ENST00000588762 RNF207Q6ZRF8 634 aa17.92■□□□□ 0.46
GHDC-209ENST00000588762 HEATR3Q7Z4Q2 680 aa17.92■□□□□ 0.46
GHDC-209ENST00000588762 PXYLP1Q8TE99 480 aa17.92■□□□□ 0.46
GHDC-209ENST00000588762 PHKBQ93100 1093 aa17.92■□□□□ 0.46
GHDC-209ENST00000588762 SLC26A6Q9BXS9 759 aa17.92■□□□□ 0.46
GHDC-209ENST00000588762 RNF26Q9BY78 433 aaPredicted RBP17.92■□□□□ 0.46
GHDC-209ENST00000588762 SH2B1Q9NRF2 756 aaPredicted RBP17.92■□□□□ 0.46
GHDC-209ENST00000588762 CYP39A1Q9NYL5 469 aa17.92■□□□□ 0.46
GHDC-209ENST00000588762 BIN2Q9UBW5 565 aaPredicted RBP17.92■□□□□ 0.46
GHDC-209ENST00000588762 DNAJC25-GNG10A0A024R161 153 aa17.91■□□□□ 0.46
GHDC-209ENST00000588762 hCG_1984214I3L0E3 225 aa17.91■□□□□ 0.46
GHDC-209ENST00000588762 LARGE1O95461 756 aa17.91■□□□□ 0.46
GHDC-209ENST00000588762 ELNP15502 786 aa17.91■□□□□ 0.46
GHDC-209ENST00000588762 MCM2P49736 904 aa17.91■□□□□ 0.46
GHDC-209ENST00000588762 BAATQ14032 418 aaPredicted RBP17.91■□□□□ 0.46
GHDC-209ENST00000588762 ZNF713Q8N859 430 aaPredicted RBP17.91■□□□□ 0.46
GHDC-209ENST00000588762 NECAB1Q8N987 351 aa17.91■□□□□ 0.46
GHDC-209ENST00000588762 NPLOC4Q8TAT6 608 aa17.91■□□□□ 0.46
GHDC-209ENST00000588762 GTF3C6Q969F1 213 aa17.91■□□□□ 0.46
GHDC-209ENST00000588762 DIS3Q9Y2L1 958 aaKnown RBP17.91■□□□□ 0.46
GHDC-209ENST00000588762 LCTP09848 1927 aa17.91■□□□□ 0.46
GHDC-209ENST00000588762 MCM3APO60318 1980 aa17.9■□□□□ 0.46
GHDC-209ENST00000588762 CFBP00751 764 aa17.9■□□□□ 0.46
GHDC-209ENST00000588762 SCG2P13521 617 aa17.9■□□□□ 0.46
GHDC-209ENST00000588762 CALML3P27482 149 aa17.9■□□□□ 0.46
GHDC-209ENST00000588762 PFKFB3Q16875 520 aaPredicted RBP17.9■□□□□ 0.46
GHDC-209ENST00000588762 ZNF792Q3KQV3 632 aa17.9■□□□□ 0.46
GHDC-209ENST00000588762 SAMD3Q8N6K7 520 aa17.9■□□□□ 0.46
GHDC-209ENST00000588762 GPKOWQ92917 476 aaPredicted RBP eCLIP17.9■□□□□ 0.46
GHDC-209ENST00000588762 PPFIA3O75145 1194 aa17.89■□□□□ 0.45
GHDC-209ENST00000588762 HMGCRP04035 888 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms