RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 PDIA3P30101 505 aaKnown RBP16.32■□□□□ 0.2
AC009163.3-201ENST00000563554 PPP2R5BQ15173 497 aa16.32■□□□□ 0.2
AC009163.3-201ENST00000563554 TKFCQ3LXA3 575 aa16.32■□□□□ 0.2
AC009163.3-201ENST00000563554 CCDC82Q8N4S0 544 aa16.32■□□□□ 0.2
AC009163.3-201ENST00000563554 CHST13Q8NET6 341 aa16.32■□□□□ 0.2
AC009163.3-201ENST00000563554 RRP36Q96EU6 259 aaKnown RBP16.32■□□□□ 0.2
AC009163.3-201ENST00000563554 MMP19Q99542 508 aa16.32■□□□□ 0.2
AC009163.3-201ENST00000563554 NUDT12Q9BQG2 462 aa16.32■□□□□ 0.2
AC009163.3-201ENST00000563554 SRRDQ9UH36 339 aa16.32■□□□□ 0.2
AC009163.3-201ENST00000563554 FBXO40Q9UH90 709 aa16.32■□□□□ 0.2
AC009163.3-201ENST00000563554 GABRQQ9UN88 632 aa16.32■□□□□ 0.2
AC009163.3-201ENST00000563554 ABCB11O95342 1321 aa16.31■□□□□ 0.2
AC009163.3-201ENST00000563554 FCER1AP12319 257 aa16.31■□□□□ 0.2
AC009163.3-201ENST00000563554 PTPREP23469 700 aa16.31■□□□□ 0.2
AC009163.3-201ENST00000563554 SMARCA1P28370 1054 aa16.31■□□□□ 0.2
AC009163.3-201ENST00000563554 PRMT2P55345 433 aa16.31■□□□□ 0.2
AC009163.3-201ENST00000563554 GRB14Q14449 540 aa16.31■□□□□ 0.2
AC009163.3-201ENST00000563554 KCTD2Q14681 263 aa16.31■□□□□ 0.2
AC009163.3-201ENST00000563554 FBXO11Q86XK2 927 aa16.31■□□□□ 0.2
AC009163.3-201ENST00000563554 MTMR8Q96EF0 704 aa16.31■□□□□ 0.2
AC009163.3-201ENST00000563554 ZNF274Q96GC6 653 aaPredicted RBP16.31■□□□□ 0.2
AC009163.3-201ENST00000563554 TRERF1Q96PN7 1200 aa16.31■□□□□ 0.2
AC009163.3-201ENST00000563554 AMNQ9BXJ7 453 aa16.31■□□□□ 0.2
AC009163.3-201ENST00000563554 NCOA5Q9HCD5 579 aaKnown RBP16.31■□□□□ 0.2
AC009163.3-201ENST00000563554 PNMA6FA0A0J9YX94 578 aa16.3■□□□□ 0.2
AC009163.3-201ENST00000563554 SLC15A5A6NIM6 579 aa16.3■□□□□ 0.2
AC009163.3-201ENST00000563554 ST18O60284 1047 aa16.3■□□□□ 0.2
AC009163.3-201ENST00000563554 ADORA2AP29274 412 aa16.3■□□□□ 0.2
AC009163.3-201ENST00000563554 ADD1P35611 737 aaKnown RBP16.3■□□□□ 0.2
AC009163.3-201ENST00000563554 RGS2P41220 211 aa16.3■□□□□ 0.2
AC009163.3-201ENST00000563554 FLT3LGP49771 235 aa16.3■□□□□ 0.2
AC009163.3-201ENST00000563554 MUM1L1Q5H9M0 696 aa16.3■□□□□ 0.2
AC009163.3-201ENST00000563554 RAET1EQ8TD07 263 aa16.3■□□□□ 0.2
AC009163.3-201ENST00000563554 SHISA4Q96DD7 197 aa16.3■□□□□ 0.2
AC009163.3-201ENST00000563554 SLKQ9H2G2 1235 aaPredicted RBP16.3■□□□□ 0.2
AC009163.3-201ENST00000563554 PTPN22Q9Y2R2 807 aa16.3■□□□□ 0.2
AC009163.3-201ENST00000563554 PTCH2Q9Y6C5 1203 aa16.3■□□□□ 0.2
AC009163.3-201ENST00000563554 HTTP42858 3142 aa16.29■□□□□ 0.2
AC009163.3-201ENST00000563554 hCG_1642624A0A1W2PR95 340 aa16.29■□□□□ 0.2
AC009163.3-201ENST00000563554 CPLX1O14810 134 aa16.29■□□□□ 0.2
AC009163.3-201ENST00000563554 STRNO43815 780 aa16.29■□□□□ 0.2
AC009163.3-201ENST00000563554 PPP1R11O60927 126 aaPredicted RBP16.29■□□□□ 0.2
AC009163.3-201ENST00000563554 CYP2B6P20813 491 aa16.29■□□□□ 0.2
AC009163.3-201ENST00000563554 MAP2K5Q13163 448 aa16.29■□□□□ 0.2
AC009163.3-201ENST00000563554 NTRK3Q16288 839 aa16.29■□□□□ 0.2
AC009163.3-201ENST00000563554 PKN2Q16513 984 aaKnown RBP16.29■□□□□ 0.2
AC009163.3-201ENST00000563554 MORN1Q5T089 497 aa16.29■□□□□ 0.2
AC009163.3-201ENST00000563554 FBXO46Q6PJ61 603 aaPredicted RBP16.29■□□□□ 0.2
AC009163.3-201ENST00000563554 ABRAQ8N0Z2 381 aa16.29■□□□□ 0.2
AC009163.3-201ENST00000563554 ANKRD35Q8N283 1001 aa16.29■□□□□ 0.2
AC009163.3-201ENST00000563554 APBA2Q99767 749 aa16.29■□□□□ 0.2
AC009163.3-201ENST00000563554 PFASO15067 1338 aa16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 MYH15Q9Y2K3 1946 aa16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 NFIBO00712 420 aa16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 CTDNEP1O95476 244 aa16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 SCRN1Q12765 414 aa16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 TRAF1Q13077 416 aa16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 ME3Q16798 604 aa16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 CPLX2Q6PUV4 134 aaKnown RBP16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 NSMFQ6X4W1 530 aa16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 DPP9Q86TI2 863 aa16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 DDX11Q96FC9 970 aa16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 MCOLN1Q9GZU1 580 aa16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 A1CFQ9NQ94 594 aaKnown RBP16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 PCDHA1Q9Y5I3 950 aa16.28■□□□□ 0.2
AC009163.3-201ENST00000563554 WDR81Q562E7 1941 aa16.27■□□□□ 0.2
AC009163.3-201ENST00000563554 PFKFB2O60825 505 aa16.27■□□□□ 0.2
AC009163.3-201ENST00000563554 PGK2P07205 417 aa16.27■□□□□ 0.2
AC009163.3-201ENST00000563554 IRF5Q13568 498 aa16.27■□□□□ 0.2
AC009163.3-201ENST00000563554 COL13A1Q5TAT6 717 aaPredicted RBP16.27■□□□□ 0.2
AC009163.3-201ENST00000563554 PHKBQ93100 1093 aa16.27■□□□□ 0.2
AC009163.3-201ENST00000563554 GTF3C6Q969F1 213 aa16.27■□□□□ 0.2
AC009163.3-201ENST00000563554 SLC5A4Q9NY91 659 aa16.27■□□□□ 0.2
AC009163.3-201ENST00000563554 GJD2Q9UKL4 321 aa16.27■□□□□ 0.2
AC009163.3-201ENST00000563554 MRPL11Q9Y3B7 192 aaKnown RBP16.27■□□□□ 0.2
AC009163.3-201ENST00000563554 CENPFP49454 3210 aa16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 PTPDC1A2A3K4 754 aa16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 ADCY3O60266 1144 aa16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 PPFIA3O75145 1194 aa16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 IFNAR1P17181 557 aa16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 AKAP17AQ02040 695 aaKnown RBP16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 SLC30A10Q6XR72 485 aa16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 TRIM22Q8IYM9 498 aa16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 NECAB1Q8N987 351 aa16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 SLAIN1Q8ND83 568 aa16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 USP6NLQ92738 828 aa16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 GPKOWQ92917 476 aaPredicted RBP eCLIP16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 SLC26A6Q9BXS9 759 aa16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 RNF26Q9BY78 433 aaPredicted RBP16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 RBM27Q9P2N5 1060 aaKnown RBP16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 LIMCH1Q9UPQ0 1083 aa16.26■□□□□ 0.19
AC009163.3-201ENST00000563554 CDKL5O76039 1030 aa16.25■□□□□ 0.19
AC009163.3-201ENST00000563554 ELNP15502 786 aa16.25■□□□□ 0.19
AC009163.3-201ENST00000563554 SLC9C1Q4G0N8 1177 aa16.25■□□□□ 0.19
AC009163.3-201ENST00000563554 RNF207Q6ZRF8 634 aa16.25■□□□□ 0.19
AC009163.3-201ENST00000563554 IL27Q8NEV9 243 aa16.25■□□□□ 0.19
AC009163.3-201ENST00000563554 NPLOC4Q8TAT6 608 aa16.25■□□□□ 0.19
AC009163.3-201ENST00000563554 CLEC4DQ8WXI8 215 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms