RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 CSRNP2Q9H175 543 aa19.2■□□□□ 0.66
PTPN21-208ENST00000556564 MYL3P08590 195 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 IFRD2Q12894 506 aaPredicted RBP19.19■□□□□ 0.66
PTPN21-208ENST00000556564 RNF207Q6ZRF8 634 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 LSM14BQ9BX40 385 aaKnown RBP19.19■□□□□ 0.66
PTPN21-208ENST00000556564 TFDP1Q14186 410 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 PPP1R7Q15435 360 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 ATP6V0A1Q93050 837 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 ZNRF3Q9ULT6 936 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 ABL1P00519 1130 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 ARMCX5Q6P1M9 558 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 RSPH3Q86UC2 560 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 TBC1D10CQ8IV04 446 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 ZNF34Q8IZ26 560 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 BRD1O95696 1058 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 LONP1P36776 959 aaKnown RBP19.19■□□□□ 0.66
PTPN21-208ENST00000556564 TRIM14Q14142 442 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 ZFP91Q96JP5 570 aaPredicted RBP19.19■□□□□ 0.66
PTPN21-208ENST00000556564 SNX16P57768 344 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 NSUN7Q8NE18 718 aaKnown RBP19.19■□□□□ 0.66
PTPN21-208ENST00000556564 DCAF4Q8WV16 495 aa19.19■□□□□ 0.66
PTPN21-208ENST00000556564 CNOT7Q9UIV1 285 aaKnown RBP19.19■□□□□ 0.66
PTPN21-208ENST00000556564 CACNB1Q02641 598 aaPredicted RBP19.18■□□□□ 0.66
PTPN21-208ENST00000556564 LONRF3Q496Y0 759 aa19.18■□□□□ 0.66
PTPN21-208ENST00000556564 RETREG2Q8NC44 543 aa19.18■□□□□ 0.66
PTPN21-208ENST00000556564 FOXP1Q9H334 677 aaPredicted RBP19.18■□□□□ 0.66
PTPN21-208ENST00000556564 ZBTB12Q9Y330 459 aaPredicted RBP19.18■□□□□ 0.66
PTPN21-208ENST00000556564 PAXBP1Q9Y5B6 917 aa19.18■□□□□ 0.66
PTPN21-208ENST00000556564 FAM207AQ9NSI2 230 aaPredicted RBP19.18■□□□□ 0.66
PTPN21-208ENST00000556564 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.18■□□□□ 0.66
PTPN21-208ENST00000556564 COL4A3BPQ9Y5P4 624 aa19.18■□□□□ 0.66
PTPN21-208ENST00000556564 A0A1W2PRG0 241 aa19.18■□□□□ 0.66
PTPN21-208ENST00000556564 PPP1R14CQ8TAE6 165 aa19.18■□□□□ 0.66
PTPN21-208ENST00000556564 STAG1Q8WVM7 1258 aa19.18■□□□□ 0.66
PTPN21-208ENST00000556564 NLRP7Q8WX94 980 aa19.18■□□□□ 0.66
PTPN21-208ENST00000556564 MYO1AQ9UBC5 1043 aa19.18■□□□□ 0.66
PTPN21-208ENST00000556564 GOLGA6L7A0A1B0GV03 622 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 CYP26C1Q6V0L0 522 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 RPS6KC1Q96S38 1066 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 PCDHA7Q9UN72 937 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 HSF2BPO75031 334 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 RPN1P04843 607 aaKnown RBP19.17■□□□□ 0.66
PTPN21-208ENST00000556564 NOLC1Q14978 699 aaKnown RBP eCLIP19.17■□□□□ 0.66
PTPN21-208ENST00000556564 ZNF827Q17R98 1081 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 CPVLQ9H3G5 476 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 UTYO14607 1347 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 SPP2Q13103 211 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 NR5A1Q13285 461 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 ODR4Q5SWX8 454 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 DCUN1D2Q6PH85 259 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 FBXO18Q8NFZ0 1043 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 POMGNT1Q8WZA1 660 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 POLR3GO15318 223 aaPredicted RBP19.17■□□□□ 0.66
PTPN21-208ENST00000556564 COBLO75128 1261 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 XRCC6P12956 609 aaKnown RBP eCLIP19.17■□□□□ 0.66
PTPN21-208ENST00000556564 MTERF2Q49AM1 385 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 DCP1AQ9NPI6 582 aaPredicted RBP19.17■□□□□ 0.66
PTPN21-208ENST00000556564 PARP2Q9UGN5 583 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 CCDC127Q96BQ5 260 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 NLRC4Q9NPP4 1024 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 CGNQ9P2M7 1197 aaKnown RBP19.17■□□□□ 0.66
PTPN21-208ENST00000556564 LRFN2Q9ULH4 789 aa19.17■□□□□ 0.66
PTPN21-208ENST00000556564 XRCC5P13010 732 aaKnown RBP19.16■□□□□ 0.66
PTPN21-208ENST00000556564 PKP1Q13835 747 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 CCDC155Q8N6L0 562 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 CEP170P1Q96L14 293 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.16■□□□□ 0.66
PTPN21-208ENST00000556564 ELP3Q9H9T3 547 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 ST7Q9NRC1 585 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 H0YCG3 227 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 RNASE9P60153 205 aaKnown RBP19.16■□□□□ 0.66
PTPN21-208ENST00000556564 ABI1Q8IZP0 508 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 BBXQ8WY36 941 aaPredicted RBP19.16■□□□□ 0.66
PTPN21-208ENST00000556564 JAKMIP2Q96AA8 810 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 NUP58Q9BVL2 599 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 RBSNQ9H1K0 784 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 USP17L10C9JJH3 530 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 GNA14O95837 355 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 NDUFA8P51970 172 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 MORC3Q14149 939 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 FEM1BQ9UK73 627 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 RPAP1Q9BWH6 1393 aaPredicted RBP19.16■□□□□ 0.66
PTPN21-208ENST00000556564 hCG_1984214I3L0E3 225 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 PRPF3O43395 683 aaKnown RBP19.16■□□□□ 0.66
PTPN21-208ENST00000556564 SNRNP48Q6IEG0 339 aaKnown RBP19.16■□□□□ 0.66
PTPN21-208ENST00000556564 ZNF713Q8N859 430 aaPredicted RBP19.16■□□□□ 0.66
PTPN21-208ENST00000556564 SLC7A3Q8WY07 619 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 HOXC10Q9NYD6 342 aa19.16■□□□□ 0.66
PTPN21-208ENST00000556564 GRIN3BO60391 1043 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 MMP1P03956 469 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 TRERF1Q96PN7 1200 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 PAIP2Q9BPZ3 127 aaKnown RBP19.15■□□□□ 0.66
PTPN21-208ENST00000556564 SCAF8Q9UPN6 1271 aaKnown RBP19.15■□□□□ 0.66
PTPN21-208ENST00000556564 CNTNAP4Q9C0A0 1308 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 INO80B-WBP1J3KQ70 363 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 NKX1-1Q15270 411 aaPredicted RBP19.15■□□□□ 0.66
PTPN21-208ENST00000556564 SLC9C1Q4G0N8 1177 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 CCDC25Q86WR0 208 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 DDX12PQ92771 950 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 INO80BQ9C086 356 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms