RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 NHEJ1Q9H9Q4 299 aaPredicted RBP9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 SENP2Q9HC62 589 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 A0A1B0GTH6 734 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 GNA14O95837 355 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 PRCPP42785 496 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 GUCY2FP51841 1108 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 TRAPPC3LQ5T215 181 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 PEX26Q7Z412 305 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 CEP57Q86XR8 500 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 FMNL3Q8IVF7 1028 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 NAP1L3Q99457 506 aaPredicted RBP9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 BRIP1Q9BX63 1249 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 PLA2G12BQ9BX93 195 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 MTRF1LQ9UGC7 380 aaKnown RBP9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 GOLGA8KD6RF30 607 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 POLR2FP61218 127 aaKnown RBP9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 RASSF7Q02833 373 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 NR1I3Q14994 352 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 FAM26FQ5R3K3 315 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 SELENOSQ9BQE4 189 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 TRIM31Q9BZY9 425 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 ZNF219Q9P2Y4 722 aaPredicted RBP9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 GGA1Q9UJY5 639 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 UTP11Q9Y3A2 253 aaKnown RBP9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 PARP3Q9Y6F1 533 aa9.08□□□□□ -0.96
PRKAB1-207ENST00000542698 MROH7-TTC4A0A0A0MT08 1334 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 ANKRD62A6NC57 917 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 TNFAIP3P21580 790 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 SLC1A4P43007 532 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 ATP1A2P50993 1020 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 PPARDQ03181 441 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 DGKHQ86XP1 1220 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 FNBP4Q8N3X1 1017 aaPredicted RBP9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 CABS1Q96KC9 395 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 PLCD4Q9BRC7 762 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 LSM14BQ9BX40 385 aaKnown RBP9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 STMN4Q9H169 189 aaPredicted RBP9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 FRMD4BQ9Y2L6 1034 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 ZNF804BA4D1E1 1349 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 TTC26A0AVF1 554 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 LGALS16A8MUM7 142 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 KCNK3O14649 394 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 USP17L8P0C7I0 530 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 CXCR5P32302 372 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 ARHGAP25P42331 645 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 CCT5P48643 541 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 FKBP3Q00688 224 aaKnown RBP9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 PTPAQ15257 358 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 MAN2A1Q16706 1144 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 GBP6Q6ZN66 633 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 LARP4BQ92615 738 aaKnown RBP9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 NSRP1Q9H0G5 558 aaKnown RBP9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 ADD3Q9UEY8 706 aaKnown RBP9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 ARMCX3Q9UH62 379 aaPredicted RBP9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 ZNF142P52746 1687 aaPredicted RBP9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 TMEM110-MUSTN1A8MSY1 372 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 CALUO43852 315 aaPredicted RBP9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 KIF4AO95239 1232 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 PLCG1P19174 1290 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 GUCY2DQ02846 1103 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 EHHADHQ08426 723 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 COL9A3Q14050 684 aaPredicted RBP9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 REXO1L1PQ8IX06 675 aa9.07□□□□□ -0.96
PRKAB1-207ENST00000542698 ITSN1Q15811 1721 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 TRIM49BA6NDI0 452 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 ACTN4O43707 911 aaKnown RBP9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 NCAPHQ15003 741 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 PFKFB3Q16875 520 aaPredicted RBP9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 MFSD14BQ5SR56 506 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 CEP85LQ5SZL2 805 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 DAAM2Q86T65 1068 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 TBCKQ8TEA7 893 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 ZNF512BQ96KM6 892 aaPredicted RBP9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 PANK4Q9NVE7 773 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 MTUS1Q9ULD2 1270 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 XRCC5P13010 732 aaKnown RBP9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 CYP2C19P33261 490 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 EIF4A3P38919 411 aaKnown RBP9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 MECOMQ03112 1051 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 ADAM9Q13443 819 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 USP37Q86T82 979 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 CCDC25Q86WR0 208 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 ZNF622Q969S3 477 aaKnown RBP eCLIP9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 CCDC77Q9BR77 488 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 NDST4Q9H3R1 872 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 HPSEQ9Y251 543 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 PCDHB13Q9Y5F0 798 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 SRGAP2O75044 1071 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 CYP19A1P11511 503 aaPredicted RBP9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 EZRP15311 586 aaKnown RBP9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 CALRP27797 417 aaKnown RBP9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 FXR1P51114 621 aaKnown RBP eCLIP9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 GRIN1Q05586 938 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 CALCOCO2Q13137 446 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 PLS1Q14651 629 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 KCTD16Q68DU8 428 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 GPBP1Q86WP2 473 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 TBC1D22AQ8WUA7 517 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 PSTPIP2Q9H939 334 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 MRPL44Q9H9J2 332 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms