RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 ANKRD20A12PQ8NF67 263 aa16.66■□□□□ 0.26
CHTOP-206ENST00000495554 C7orf43Q8WVR3 580 aa16.66■□□□□ 0.26
CHTOP-206ENST00000495554 NELFBQ8WX92 580 aa16.66■□□□□ 0.26
CHTOP-206ENST00000495554 SERPINB13Q9UIV8 391 aa16.66■□□□□ 0.26
CHTOP-206ENST00000495554 ITIH6Q6UXX5 1313 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 SHMT1P34896 483 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 CRKP46108 304 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 KCNB1Q14721 858 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 UBA5Q9GZZ9 404 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 CUEDC2Q9H467 287 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 RGS17Q9UGC6 210 aaPredicted RBP16.65■□□□□ 0.26
CHTOP-206ENST00000495554 PP2D1A8MPX8 630 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 hCG_1984214I3L0E3 225 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 OR52Z1P0C646 297 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 PDHBP11177 359 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 RBL2Q08999 1139 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 EZH2Q15910 746 aaKnown RBP16.65■□□□□ 0.26
CHTOP-206ENST00000495554 SLC15A2Q16348 729 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 TOGARAM2Q6ZUX3 1019 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 CLEC10AQ8IUN9 316 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 ZNF713Q8N859 430 aaPredicted RBP16.65■□□□□ 0.26
CHTOP-206ENST00000495554 MRIQ9BWK5 157 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 RIOX1Q9H6W3 641 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 MAGEF1Q9HAY2 307 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 KBTBD4Q9NVX7 518 aa16.65■□□□□ 0.26
CHTOP-206ENST00000495554 ZNF219Q9P2Y4 722 aaPredicted RBP16.65■□□□□ 0.26
CHTOP-206ENST00000495554 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.65■□□□□ 0.26
CHTOP-206ENST00000495554 SCN9AQ15858 1988 aa16.64■□□□□ 0.26
CHTOP-206ENST00000495554 ESYT2A0FGR8 921 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 PRCPP42785 496 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 KRT31Q15323 416 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 DACT2Q5SW24 774 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 NEK8Q86SG6 692 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 ZDHHC15Q96MV8 337 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 FEZ1Q99689 392 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 VAT1LQ9HCJ6 419 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 H7C1D1 291 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 N4BP3O15049 544 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 CCNT1O60563 726 aaKnown RBP16.64■□□□□ 0.25
CHTOP-206ENST00000495554 SNHG28P0DPA3 235 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 ORC2Q13416 577 aaPredicted RBP16.64■□□□□ 0.25
CHTOP-206ENST00000495554 LETM2Q2VYF4 491 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 STRIP1Q5VSL9 837 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 KIAA0825Q8IV33 1275 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 CNGA4Q8IV77 575 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 CAMKK2Q96RR4 588 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 PIGSQ96S52 555 aa16.64■□□□□ 0.25
CHTOP-206ENST00000495554 SRRTQ9BXP5 876 aaKnown RBP16.64■□□□□ 0.25
CHTOP-206ENST00000495554 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
CHTOP-206ENST00000495554 TCP11X2Q5H9J9 407 aa16.63■□□□□ 0.25
CHTOP-206ENST00000495554 ADSSL1Q8N142 457 aa16.63■□□□□ 0.25
CHTOP-206ENST00000495554 CCDC51Q96ER9 411 aa16.63■□□□□ 0.25
CHTOP-206ENST00000495554 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.63■□□□□ 0.25
CHTOP-206ENST00000495554 GDAQ9Y2T3 454 aa16.63■□□□□ 0.25
CHTOP-206ENST00000495554 V9GYY5 206 aaPredicted RBP16.63■□□□□ 0.25
CHTOP-206ENST00000495554 ECE2O60344 883 aa16.63■□□□□ 0.25
CHTOP-206ENST00000495554 MFAP3LO75121 409 aa16.63■□□□□ 0.25
CHTOP-206ENST00000495554 TPM1P09493 284 aa16.63■□□□□ 0.25
CHTOP-206ENST00000495554 CCT6AP40227 531 aaKnown RBP16.63■□□□□ 0.25
CHTOP-206ENST00000495554 EIF6P56537 245 aaKnown RBP16.63■□□□□ 0.25
CHTOP-206ENST00000495554 EN1Q05925 392 aaPredicted RBP16.63■□□□□ 0.25
CHTOP-206ENST00000495554 ELF2Q15723 593 aa16.63■□□□□ 0.25
CHTOP-206ENST00000495554 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
CHTOP-206ENST00000495554 REXO1Q8N1G1 1221 aaKnown RBP16.63■□□□□ 0.25
CHTOP-206ENST00000495554 LRRC47Q8N1G4 583 aaKnown RBP16.63■□□□□ 0.25
CHTOP-206ENST00000495554 ZNF397Q8NF99 534 aaPredicted RBP16.63■□□□□ 0.25
CHTOP-206ENST00000495554 SWAP70Q9UH65 585 aa16.63■□□□□ 0.25
CHTOP-206ENST00000495554 KCNJ18B7U540 433 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 COBLO75128 1261 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 RHOBTB3O94955 611 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 CCDC175P0C221 793 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 PSEN1P49768 467 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 FKBP1AP62942 108 aaKnown RBP16.62■□□□□ 0.25
CHTOP-206ENST00000495554 KCNJ12Q14500 433 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 CPLX3Q8WVH0 158 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 FRMPD2Q68DX3 1309 aaPredicted RBP16.62■□□□□ 0.25
CHTOP-206ENST00000495554 MYO3BQ8WXR4 1341 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 CASP14P31944 242 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 COPB1P53618 953 aaKnown RBP16.62■□□□□ 0.25
CHTOP-206ENST00000495554 CACNB3P54284 484 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
CHTOP-206ENST00000495554 STIM1Q13586 685 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 KMT5BQ4FZB7 885 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 CABP7Q86V35 215 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 DNAJC18Q9H819 358 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 MAPK8IP1Q9UQF2 711 aa16.62■□□□□ 0.25
CHTOP-206ENST00000495554 KLRC4O43908 158 aa16.61■□□□□ 0.25
CHTOP-206ENST00000495554 GYPCP04921 128 aa16.61■□□□□ 0.25
CHTOP-206ENST00000495554 GNG11P61952 73 aa16.61■□□□□ 0.25
CHTOP-206ENST00000495554 POTEAQ6S8J7 498 aa16.61■□□□□ 0.25
CHTOP-206ENST00000495554 TBCKQ8TEA7 893 aa16.61■□□□□ 0.25
CHTOP-206ENST00000495554 SOWAHDA6NJG2 315 aa16.61■□□□□ 0.25
CHTOP-206ENST00000495554 FANCGO15287 622 aa16.61■□□□□ 0.25
CHTOP-206ENST00000495554 URI1O94763 535 aaPredicted RBP16.61■□□□□ 0.25
CHTOP-206ENST00000495554 TTLL1O95922 423 aa16.61■□□□□ 0.25
CHTOP-206ENST00000495554 TRIM14Q14142 442 aa16.61■□□□□ 0.25
CHTOP-206ENST00000495554 GIMAP8Q8ND71 665 aaPredicted RBP16.61■□□□□ 0.25
CHTOP-206ENST00000495554 CNKSR1Q969H4 720 aa16.61■□□□□ 0.25
CHTOP-206ENST00000495554 PLIN2Q99541 437 aa16.61■□□□□ 0.25
CHTOP-206ENST00000495554 FAM198AQ9UFP1 575 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms